RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 IGHV7-81A0A0B4J1V7 117 aa10.78□□□□□ -0.68
SYNPO-205ENST00000522122 PRSS29PA6NIE9 313 aa10.78□□□□□ -0.68
SYNPO-205ENST00000522122 H3BMG7 143 aa10.78□□□□□ -0.68
SYNPO-205ENST00000522122 H3BUA1 57 aa10.78□□□□□ -0.68
SYNPO-205ENST00000522122 CTSGP08311 255 aa10.78□□□□□ -0.68
SYNPO-205ENST00000522122 GDF5OSQ5U4N7 250 aa10.78□□□□□ -0.68
SYNPO-205ENST00000522122 CUL9Q8IWT3 2517 aa10.78□□□□□ -0.68
SYNPO-205ENST00000522122 E7EUB6 86 aa10.78□□□□□ -0.68
SYNPO-205ENST00000522122 K7EMI3 77 aa10.78□□□□□ -0.68
SYNPO-205ENST00000522122 FGF6P10767 208 aa10.78□□□□□ -0.68
SYNPO-205ENST00000522122 SRSF2Q01130 221 aaKnown RBP10.78□□□□□ -0.68
SYNPO-205ENST00000522122 GNRH2O43555 120 aa10.78□□□□□ -0.68
SYNPO-205ENST00000522122 SS18Q15532 418 aa10.78□□□□□ -0.68
SYNPO-205ENST00000522122 IGFBPL1Q8WX77 278 aa10.78□□□□□ -0.68
SYNPO-205ENST00000522122 TAX1BP3O14907 124 aa10.77□□□□□ -0.68
SYNPO-205ENST00000522122 TCF15Q12870 199 aa10.77□□□□□ -0.68
SYNPO-205ENST00000522122 UTF1Q5T230 341 aa10.77□□□□□ -0.68
SYNPO-205ENST00000522122 IGF2-ASQ6U949 168 aa10.77□□□□□ -0.68
SYNPO-205ENST00000522122 ZNRF2Q8NHG8 242 aa10.77□□□□□ -0.68
SYNPO-205ENST00000522122 NCKAP5O14513 1909 aa10.77□□□□□ -0.69
SYNPO-205ENST00000522122 C12orf74Q32Q52 190 aa10.77□□□□□ -0.69
SYNPO-205ENST00000522122 RNASE8Q8TDE3 154 aaKnown RBP10.77□□□□□ -0.69
SYNPO-205ENST00000522122 ATP6V0BQ99437 205 aa10.77□□□□□ -0.69
SYNPO-205ENST00000522122 MRPL36Q9P0J6 103 aaKnown RBP10.77□□□□□ -0.69
SYNPO-205ENST00000522122 IGLV1-47P01700 117 aa10.77□□□□□ -0.69
SYNPO-205ENST00000522122 CRYGCP07315 174 aa10.77□□□□□ -0.69
SYNPO-205ENST00000522122 AMTNQ6UX39 209 aa10.77□□□□□ -0.69
SYNPO-205ENST00000522122 MSRB1Q9NZV6 116 aa10.77□□□□□ -0.69
SYNPO-205ENST00000522122 ELANEP08246 267 aa10.76□□□□□ -0.69
SYNPO-205ENST00000522122 AZU1P20160 251 aa10.76□□□□□ -0.69
SYNPO-205ENST00000522122 ANKRD39Q53RE8 183 aa10.76□□□□□ -0.69
SYNPO-205ENST00000522122 LAMTOR3Q9UHA4 124 aa10.76□□□□□ -0.69
SYNPO-205ENST00000522122 IGHV3-38A0A0C4DH36 116 aa10.76□□□□□ -0.69
SYNPO-205ENST00000522122 H3BMM0 161 aa10.76□□□□□ -0.69
SYNPO-205ENST00000522122 PLXNB1O43157 2135 aa10.76□□□□□ -0.69
SYNPO-205ENST00000522122 HIST1H4AP62805 103 aaKnown RBP10.76□□□□□ -0.69
SYNPO-205ENST00000522122 UBE2WQ96B02 151 aa10.76□□□□□ -0.69
SYNPO-205ENST00000522122 TRBV25-1A0A075B6N4 114 aa10.75□□□□□ -0.69
SYNPO-205ENST00000522122 BUB3O43684 328 aa10.75□□□□□ -0.69
SYNPO-205ENST00000522122 NBL1P41271 181 aa10.75□□□□□ -0.69
SYNPO-205ENST00000522122 TNRC6BQ9UPQ9 1833 aaKnown RBP10.75□□□□□ -0.69
SYNPO-205ENST00000522122 J3QLI3 93 aa10.75□□□□□ -0.69
SYNPO-205ENST00000522122 WISP2O76076 250 aa10.75□□□□□ -0.69
SYNPO-205ENST00000522122 DNAJC30Q96LL9 226 aa10.75□□□□□ -0.69
SYNPO-205ENST00000522122 VWC2LB2RUY7 222 aa10.75□□□□□ -0.69
SYNPO-205ENST00000522122 TEX22C9J3V5 150 aa10.75□□□□□ -0.69
SYNPO-205ENST00000522122 LINC00310P59036 64 aa10.74□□□□□ -0.69
SYNPO-205ENST00000522122 GAGE2AQ6NT46 116 aa10.74□□□□□ -0.69
SYNPO-205ENST00000522122 SPRY2O43597 315 aa10.74□□□□□ -0.69
SYNPO-205ENST00000522122 CFHR3Q02985 330 aa10.74□□□□□ -0.69
SYNPO-205ENST00000522122 RNF114Q9Y508 228 aa10.74□□□□□ -0.69
SYNPO-205ENST00000522122 TMEM243Q9BU79 118 aa10.73□□□□□ -0.69
SYNPO-205ENST00000522122 NACAE9PAV3 2078 aa10.73□□□□□ -0.69
SYNPO-205ENST00000522122 RHOHQ15669 191 aa10.73□□□□□ -0.69
SYNPO-205ENST00000522122 MLST8Q9BVC4 326 aa10.73□□□□□ -0.69
SYNPO-205ENST00000522122 WI2-2373I1.2A0A1W2PRP0 233 aa10.72□□□□□ -0.69
SYNPO-205ENST00000522122 GAGE12HA6NDE8 117 aa10.72□□□□□ -0.69
SYNPO-205ENST00000522122 Q8N9W7 124 aa10.72□□□□□ -0.69
SYNPO-205ENST00000522122 INAFM2P0DMQ5 153 aa10.72□□□□□ -0.69
SYNPO-205ENST00000522122 PTPN13Q12923 2485 aa10.72□□□□□ -0.69
SYNPO-205ENST00000522122 GAGE7O76087 117 aa10.72□□□□□ -0.69
SYNPO-205ENST00000522122 GAGE12FP0CL80 117 aa10.72□□□□□ -0.69
SYNPO-205ENST00000522122 GAGE12GP0CL81 117 aa10.72□□□□□ -0.69
SYNPO-205ENST00000522122 GAGE12IP0CL82 117 aa10.72□□□□□ -0.69
SYNPO-205ENST00000522122 FOXI2Q6ZQN5 318 aa10.72□□□□□ -0.69
SYNPO-205ENST00000522122 ADAMTS20P59510 1910 aa10.71□□□□□ -0.69
SYNPO-205ENST00000522122 PFN2P35080 140 aa10.71□□□□□ -0.69
SYNPO-205ENST00000522122 MYCNOSP40205 109 aa10.71□□□□□ -0.69
SYNPO-205ENST00000522122 LINC00322Q6ZN03 302 aaPredicted RBP10.71□□□□□ -0.7
SYNPO-205ENST00000522122 BOD1L2Q8IYS8 172 aa10.71□□□□□ -0.7
SYNPO-205ENST00000522122 SPATA12Q7Z6I5 190 aa10.71□□□□□ -0.7
SYNPO-205ENST00000522122 KIAA1549Q9HCM3 1950 aa10.7□□□□□ -0.7
SYNPO-205ENST00000522122 RPL39LQ96EH5 51 aaKnown RBP10.7□□□□□ -0.7
SYNPO-205ENST00000522122 IGHV4-59P01825 116 aa10.7□□□□□ -0.7
SYNPO-205ENST00000522122 Q8N976 141 aa10.7□□□□□ -0.7
SYNPO-205ENST00000522122 Q96MF0 132 aa10.7□□□□□ -0.7
SYNPO-205ENST00000522122 PRAC2D3DTV9 90 aa10.69□□□□□ -0.7
SYNPO-205ENST00000522122 HERVK_113P63121 156 aa10.69□□□□□ -0.7
SYNPO-205ENST00000522122 DEFB112Q30KQ8 113 aa10.69□□□□□ -0.7
SYNPO-205ENST00000522122 RNASE13Q5GAN3 156 aaKnown RBP10.69□□□□□ -0.7
SYNPO-205ENST00000522122 SONP18583 2426 aaKnown RBP10.69□□□□□ -0.7
SYNPO-205ENST00000522122 C16orf54Q6UWD8 224 aa10.69□□□□□ -0.7
SYNPO-205ENST00000522122 IGHV4-61A0A0C4DH41 118 aa10.68□□□□□ -0.7
SYNPO-205ENST00000522122 HOXD3P31249 432 aaPredicted RBP10.68□□□□□ -0.7
SYNPO-205ENST00000522122 GAGE6Q13070 117 aa10.68□□□□□ -0.7
SYNPO-205ENST00000522122 AJUBAQ96IF1 538 aa10.68□□□□□ -0.7
SYNPO-205ENST00000522122 SPAG8Q99932 426 aaPredicted RBP10.68□□□□□ -0.7
SYNPO-205ENST00000522122 CFC1BP0CG36 223 aa10.68□□□□□ -0.7
SYNPO-205ENST00000522122 CFC1P0CG37 223 aa10.68□□□□□ -0.7
SYNPO-205ENST00000522122 BLCAPP62952 87 aa10.68□□□□□ -0.7
SYNPO-205ENST00000522122 OTOGLQ3ZCN5 2332 aa10.68□□□□□ -0.7
SYNPO-205ENST00000522122 IGLL5B9A064 214 aa10.67□□□□□ -0.7
SYNPO-205ENST00000522122 SOCS3O14543 225 aa10.67□□□□□ -0.7
SYNPO-205ENST00000522122 EDA2RQ9HAV5 297 aa10.67□□□□□ -0.7
SYNPO-205ENST00000522122 VPREB3Q9UKI3 123 aa10.67□□□□□ -0.7
SYNPO-205ENST00000522122 ZNF48Q96MX3 618 aaPredicted RBP10.67□□□□□ -0.7
SYNPO-205ENST00000522122 SPANXA1Q9NS26 97 aa10.67□□□□□ -0.7
SYNPO-205ENST00000522122 HIGD1BQ9P298 99 aa10.66□□□□□ -0.7
SYNPO-205ENST00000522122 C2CD3Q4AC94 2353 aa10.66□□□□□ -0.7
SYNPO-205ENST00000522122 CARD19Q96LW7 228 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms