RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 C7orf77A4D0Y5 90 aa10.91□□□□□ -0.66
LSM1-203ENST00000520755 MED14OSP0DP75 135 aa10.91□□□□□ -0.66
LSM1-203ENST00000520755 CTRLP40313 264 aa10.91□□□□□ -0.66
LSM1-203ENST00000520755 RHEBQ15382 184 aa10.91□□□□□ -0.66
LSM1-203ENST00000520755 TSKUQ8WUA8 353 aa10.91□□□□□ -0.66
LSM1-203ENST00000520755 ANAPC16Q96DE5 110 aa10.91□□□□□ -0.66
LSM1-203ENST00000520755 SSBP4Q9BWG4 385 aaPredicted RBP10.91□□□□□ -0.66
LSM1-203ENST00000520755 NOP10Q9NPE3 64 aaKnown RBP10.91□□□□□ -0.66
LSM1-203ENST00000520755 TIMM8BQ9Y5J9 83 aaPredicted RBP10.91□□□□□ -0.66
LSM1-203ENST00000520755 A8MWL6 223 aa10.9□□□□□ -0.66
LSM1-203ENST00000520755 PPP1R2P9O14990 202 aa10.9□□□□□ -0.66
LSM1-203ENST00000520755 MT-ND4LP03901 98 aa10.9□□□□□ -0.66
LSM1-203ENST00000520755 OR5AL1P0C617 328 aa10.9□□□□□ -0.66
LSM1-203ENST00000520755 S100A4P26447 101 aaKnown RBP10.9□□□□□ -0.66
LSM1-203ENST00000520755 DAZ2Q13117 558 aaKnown RBP10.9□□□□□ -0.66
LSM1-203ENST00000520755 FER1L6-AS1Q8NA97 138 aa10.9□□□□□ -0.66
LSM1-203ENST00000520755 OR10AG1Q8NH19 301 aa10.9□□□□□ -0.66
LSM1-203ENST00000520755 MUC21A0A0G2JKD1 596 aa10.89□□□□□ -0.67
LSM1-203ENST00000520755 MUC21A0A140T8X8 626 aa10.89□□□□□ -0.67
LSM1-203ENST00000520755 TEX48A0A1B0GUV7 120 aa10.89□□□□□ -0.67
LSM1-203ENST00000520755 SMIM27A0A1W2PRY6 76 aa10.89□□□□□ -0.67
LSM1-203ENST00000520755 XKRY2A2RUG3 117 aa10.89□□□□□ -0.67
LSM1-203ENST00000520755 LYRM9A8MSI8 78 aa10.89□□□□□ -0.67
LSM1-203ENST00000520755 SPINK4O60575 86 aa10.89□□□□□ -0.67
LSM1-203ENST00000520755 NXPH4O95158 308 aa10.89□□□□□ -0.67
LSM1-203ENST00000520755 SNAPINO95295 136 aa10.89□□□□□ -0.67
LSM1-203ENST00000520755 C12orf74Q32Q52 190 aa10.89□□□□□ -0.67
LSM1-203ENST00000520755 Q6ZTC4 211 aa10.89□□□□□ -0.67
LSM1-203ENST00000520755 Q6ZTI0 123 aa10.89□□□□□ -0.67
LSM1-203ENST00000520755 LINC00612Q8N6U2 182 aa10.89□□□□□ -0.67
LSM1-203ENST00000520755 GFRA4Q9GZZ7 299 aa10.89□□□□□ -0.67
LSM1-203ENST00000520755 MRPL16Q9NX20 251 aaKnown RBP10.89□□□□□ -0.67
LSM1-203ENST00000520755 A0A087WWC5 75 aa10.88□□□□□ -0.67
LSM1-203ENST00000520755 HIGD1CA8MV81 97 aa10.88□□□□□ -0.67
LSM1-203ENST00000520755 DEFB130BP0DP73 79 aa10.88□□□□□ -0.67
LSM1-203ENST00000520755 DEFB130AP0DP74 79 aa10.88□□□□□ -0.67
LSM1-203ENST00000520755 FOXA3P55318 350 aaPredicted RBP10.88□□□□□ -0.67
LSM1-203ENST00000520755 DAD1P61803 113 aa10.88□□□□□ -0.67
LSM1-203ENST00000520755 LYZL1Q6UWQ5 148 aa10.88□□□□□ -0.67
LSM1-203ENST00000520755 SPXQ9BT56 116 aa10.88□□□□□ -0.67
LSM1-203ENST00000520755 TPPP3Q9BW30 176 aa10.88□□□□□ -0.67
LSM1-203ENST00000520755 CNFNQ9BYD5 112 aa10.88□□□□□ -0.67
LSM1-203ENST00000520755 RPS10P5Q9NQ39 176 aa10.88□□□□□ -0.67
LSM1-203ENST00000520755 A0A1W2PPQ1 181 aa10.87□□□□□ -0.67
LSM1-203ENST00000520755 FAM231BA6NCW3 169 aa10.87□□□□□ -0.67
LSM1-203ENST00000520755 C3orf84H3BNL1 204 aa10.87□□□□□ -0.67
LSM1-203ENST00000520755 M0R2P5 195 aa10.87□□□□□ -0.67
LSM1-203ENST00000520755 NUP35Q8NFH5 326 aa10.87□□□□□ -0.67
LSM1-203ENST00000520755 PHLDA1Q8WV24 401 aaPredicted RBP10.87□□□□□ -0.67
LSM1-203ENST00000520755 PGLYRP4Q96LB8 373 aa10.87□□□□□ -0.67
LSM1-203ENST00000520755 CTDSP1Q9GZU7 261 aa10.87□□□□□ -0.67
LSM1-203ENST00000520755 STARD9Q9P2P6 4700 aa10.86□□□□□ -0.67
LSM1-203ENST00000520755 TRGV1A0A0A0MS02 117 aa10.86□□□□□ -0.67
LSM1-203ENST00000520755 DMRTA1Q5VZB9 504 aa10.86□□□□□ -0.67
LSM1-203ENST00000520755 PTH2Q96A98 100 aa10.86□□□□□ -0.67
LSM1-203ENST00000520755 PHLDA3Q9Y5J5 127 aa10.86□□□□□ -0.67
LSM1-203ENST00000520755 GAGE12BA1L429 117 aa10.85□□□□□ -0.67
LSM1-203ENST00000520755 M0R381 172 aa10.85□□□□□ -0.67
LSM1-203ENST00000520755 GAGE7O76087 117 aa10.85□□□□□ -0.67
LSM1-203ENST00000520755 GAGE12FP0CL80 117 aa10.85□□□□□ -0.67
LSM1-203ENST00000520755 GAGE12GP0CL81 117 aa10.85□□□□□ -0.67
LSM1-203ENST00000520755 GAGE12IP0CL82 117 aa10.85□□□□□ -0.67
LSM1-203ENST00000520755 HTN3P15516 51 aa10.85□□□□□ -0.67
LSM1-203ENST00000520755 FAM3BP58499 235 aaPredicted RBP10.85□□□□□ -0.67
LSM1-203ENST00000520755 LGALS9BQ3B8N2 356 aa10.85□□□□□ -0.67
LSM1-203ENST00000520755 CASC10Q5T4H9 136 aa10.85□□□□□ -0.67
LSM1-203ENST00000520755 RASL10AQ92737 203 aa10.85□□□□□ -0.67
LSM1-203ENST00000520755 TMEM242Q9NWH2 141 aa10.85□□□□□ -0.67
LSM1-203ENST00000520755 MSRB1Q9NZV6 116 aa10.85□□□□□ -0.67
LSM1-203ENST00000520755 NAT8BQ9UHF3 227 aa10.85□□□□□ -0.67
LSM1-203ENST00000520755 IGHV4-4A0A075B6R2 117 aa10.84□□□□□ -0.67
LSM1-203ENST00000520755 TRAV10A0A0B4J240 114 aa10.84□□□□□ -0.67
LSM1-203ENST00000520755 NUPR2A6NF83 97 aa10.84□□□□□ -0.67
LSM1-203ENST00000520755 F2Z2F3 143 aa10.84□□□□□ -0.67
LSM1-203ENST00000520755 ZNF876PQ49A33 203 aa10.84□□□□□ -0.67
LSM1-203ENST00000520755 ZFP82Q8N141 532 aa10.84□□□□□ -0.67
LSM1-203ENST00000520755 POM121L12Q8N7R1 296 aa10.84□□□□□ -0.67
LSM1-203ENST00000520755 JPT2Q9H910 190 aa10.84□□□□□ -0.67
LSM1-203ENST00000520755 DEFB131BA0A096LNP1 70 aa10.83□□□□□ -0.68
LSM1-203ENST00000520755 SSTP61278 116 aa10.83□□□□□ -0.68
LSM1-203ENST00000520755 CEMP1Q6PRD7 247 aaPredicted RBP10.83□□□□□ -0.68
LSM1-203ENST00000520755 IMMP2LQ96T52 175 aa10.83□□□□□ -0.68
LSM1-203ENST00000520755 CACNG7P62955 275 aa10.82□□□□□ -0.68
LSM1-203ENST00000520755 PIK3CD-AS1Q5SR53 167 aa10.82□□□□□ -0.68
LSM1-203ENST00000520755 SPANXN1Q5VSR9 72 aa10.82□□□□□ -0.68
LSM1-203ENST00000520755 WDR73Q6P4I2 378 aa10.82□□□□□ -0.68
LSM1-203ENST00000520755 C18orf15Q96N68 181 aa10.82□□□□□ -0.68
LSM1-203ENST00000520755 CSMD3Q7Z407 3707 aa10.82□□□□□ -0.68
LSM1-203ENST00000520755 TRGV2A0A075B6R0 118 aa10.81□□□□□ -0.68
LSM1-203ENST00000520755 A0A1B0GUT8 65 aa10.81□□□□□ -0.68
LSM1-203ENST00000520755 A0A1B0GXF2 115 aa10.81□□□□□ -0.68
LSM1-203ENST00000520755 RS1O15537 224 aa10.81□□□□□ -0.68
LSM1-203ENST00000520755 NTF3P20783 257 aa10.81□□□□□ -0.68
LSM1-203ENST00000520755 S100A1P23297 94 aa10.81□□□□□ -0.68
LSM1-203ENST00000520755 CBLN2Q8IUK8 224 aa10.81□□□□□ -0.68
LSM1-203ENST00000520755 SYT8Q8NBV8 401 aa10.81□□□□□ -0.68
LSM1-203ENST00000520755 YPEL4Q96NS1 127 aa10.81□□□□□ -0.68
LSM1-203ENST00000520755 NDUFAF3Q9BU61 184 aa10.81□□□□□ -0.68
LSM1-203ENST00000520755 SAMD10Q9BYL1 202 aa10.81□□□□□ -0.68
LSM1-203ENST00000520755 KLK5Q9Y337 293 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms