RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 ZNF876PQ49A33 203 aa7.73□□□□□ -1.17
MCF2-209ENST00000520602 OR1N2Q8NGR9 330 aa7.73□□□□□ -1.17
MCF2-209ENST00000520602 JMJD8Q96S16 334 aa7.73□□□□□ -1.17
MCF2-209ENST00000520602 MRPS16Q9Y3D3 137 aaKnown RBP7.73□□□□□ -1.17
MCF2-209ENST00000520602 IGLC6P0CF74 106 aa7.72□□□□□ -1.17
MCF2-209ENST00000520602 C11orf21Q9P2W6 132 aa7.72□□□□□ -1.17
MCF2-209ENST00000520602 LENEPQ9Y5L5 61 aa7.72□□□□□ -1.17
MCF2-209ENST00000520602 RELNP78509 3460 aa7.72□□□□□ -1.17
MCF2-209ENST00000520602 LGALS1P09382 135 aaKnown RBP7.72□□□□□ -1.17
MCF2-209ENST00000520602 ZNF493Q6ZR52 646 aa7.72□□□□□ -1.17
MCF2-209ENST00000520602 CYSLTR1Q9Y271 337 aa7.72□□□□□ -1.17
MCF2-209ENST00000520602 CDKN1BP46527 198 aa7.72□□□□□ -1.17
MCF2-209ENST00000520602 FLNCQ14315 2725 aa7.72□□□□□ -1.17
MCF2-209ENST00000520602 RPL39LQ96EH5 51 aaKnown RBP7.71□□□□□ -1.17
MCF2-209ENST00000520602 URB1-AS1Q96HZ7 61 aa7.71□□□□□ -1.17
MCF2-209ENST00000520602 UBE2E2Q96LR5 201 aa7.71□□□□□ -1.17
MCF2-209ENST00000520602 ATP6V0BQ99437 205 aa7.71□□□□□ -1.17
MCF2-209ENST00000520602 TNFRSF18Q9Y5U5 241 aa7.71□□□□□ -1.17
MCF2-209ENST00000520602 GAGE10A6NGK3 116 aa7.71□□□□□ -1.17
MCF2-209ENST00000520602 DLEU1O43261 78 aa7.71□□□□□ -1.17
MCF2-209ENST00000520602 EDN2P20800 178 aa7.71□□□□□ -1.17
MCF2-209ENST00000520602 NSUN5P1Q3KNT7 163 aa7.71□□□□□ -1.17
MCF2-209ENST00000520602 STHQ8IWL8 128 aa7.71□□□□□ -1.17
MCF2-209ENST00000520602 ZNF418Q8TF45 676 aaPredicted RBP7.71□□□□□ -1.17
MCF2-209ENST00000520602 MRAP2Q96G30 205 aa7.71□□□□□ -1.17
MCF2-209ENST00000520602 CHTOPQ9Y3Y2 248 aaKnown RBP7.71□□□□□ -1.17
MCF2-209ENST00000520602 LINC01619G3V211 115 aa7.71□□□□□ -1.18
MCF2-209ENST00000520602 GAS8-AS1O95177 125 aa7.71□□□□□ -1.18
MCF2-209ENST00000520602 IGHG4P01861 327 aa7.71□□□□□ -1.18
MCF2-209ENST00000520602 CD300EQ496F6 205 aaPredicted RBP7.71□□□□□ -1.18
MCF2-209ENST00000520602 GPHB5Q86YW7 130 aa7.71□□□□□ -1.18
MCF2-209ENST00000520602 SMIM2Q9BVW6 85 aa7.71□□□□□ -1.18
MCF2-209ENST00000520602 IGHV4-31P0DP07 118 aa7.7□□□□□ -1.18
MCF2-209ENST00000520602 LGALS9BQ3B8N2 356 aa7.7□□□□□ -1.18
MCF2-209ENST00000520602 LGALS9CQ6DKI2 356 aa7.7□□□□□ -1.18
MCF2-209ENST00000520602 C2orf66Q6UXQ4 117 aa7.7□□□□□ -1.18
MCF2-209ENST00000520602 MRPL35Q9NZE8 188 aaKnown RBP7.7□□□□□ -1.18
MCF2-209ENST00000520602 TRGV11A0A075B6L2 103 aa7.7□□□□□ -1.18
MCF2-209ENST00000520602 ANKRD39Q53RE8 183 aa7.7□□□□□ -1.18
MCF2-209ENST00000520602 PRR9Q5T870 116 aa7.7□□□□□ -1.18
MCF2-209ENST00000520602 LINC01545Q5VT33 79 aa7.7□□□□□ -1.18
MCF2-209ENST00000520602 XCL2Q9UBD3 114 aa7.7□□□□□ -1.18
MCF2-209ENST00000520602 IGHV1OR15-1A0A075B7D0 117 aa7.7□□□□□ -1.18
MCF2-209ENST00000520602 VPS25Q9BRG1 176 aa7.7□□□□□ -1.18
MCF2-209ENST00000520602 H3BUT2 72 aa7.69□□□□□ -1.18
MCF2-209ENST00000520602 K7EMT4 169 aa7.69□□□□□ -1.18
MCF2-209ENST00000520602 GTF2H5Q6ZYL4 71 aa7.69□□□□□ -1.18
MCF2-209ENST00000520602 SPATA12Q7Z6I5 190 aa7.69□□□□□ -1.18
MCF2-209ENST00000520602 WFDC11Q8NEX6 87 aa7.69□□□□□ -1.18
MCF2-209ENST00000520602 JPT2Q9H910 190 aa7.69□□□□□ -1.18
MCF2-209ENST00000520602 IGSF10Q6WRI0 2623 aa7.69□□□□□ -1.18
MCF2-209ENST00000520602 H7C1H1 209 aa7.69□□□□□ -1.18
MCF2-209ENST00000520602 SAP30O75446 220 aa7.69□□□□□ -1.18
MCF2-209ENST00000520602 ORAOV1Q8WV07 137 aa7.69□□□□□ -1.18
MCF2-209ENST00000520602 VCYO14598 125 aa7.69□□□□□ -1.18
MCF2-209ENST00000520602 COX8AP10176 69 aa7.69□□□□□ -1.18
MCF2-209ENST00000520602 ZFAND2AQ8N6M9 145 aa7.69□□□□□ -1.18
MCF2-209ENST00000520602 J3QKU1 62 aa7.68□□□□□ -1.18
MCF2-209ENST00000520602 PF4P02776 101 aa7.68□□□□□ -1.18
MCF2-209ENST00000520602 NPSP0C0P6 89 aa7.68□□□□□ -1.18
MCF2-209ENST00000520602 PCP2Q8IVA1 136 aa7.68□□□□□ -1.18
MCF2-209ENST00000520602 Q8N976 141 aa7.68□□□□□ -1.18
MCF2-209ENST00000520602 SDHAF1A6NFY7 115 aa7.68□□□□□ -1.18
MCF2-209ENST00000520602 AMMECR1LQ6DCA0 310 aa7.68□□□□□ -1.18
MCF2-209ENST00000520602 APRG1Q8IVJ8 170 aa7.68□□□□□ -1.18
MCF2-209ENST00000520602 TTTY13Q9BZ97 58 aa7.68□□□□□ -1.18
MCF2-209ENST00000520602 NHP2Q9NX24 153 aaKnown RBP7.68□□□□□ -1.18
MCF2-209ENST00000520602 U3KQE9 123 aa7.68□□□□□ -1.18
MCF2-209ENST00000520602 MRPL52Q86TS9 123 aaKnown RBP7.68□□□□□ -1.18
MCF2-209ENST00000520602 IGHV3-64A0A075B6Q5 118 aa7.67□□□□□ -1.18
MCF2-209ENST00000520602 TP53TG1Q9Y2A0 90 aa7.67□□□□□ -1.18
MCF2-209ENST00000520602 IGLV1-40P01703 118 aa7.67□□□□□ -1.18
MCF2-209ENST00000520602 SMIM13P0DJ93 91 aa7.67□□□□□ -1.18
MCF2-209ENST00000520602 PSMB8P28062 276 aa7.67□□□□□ -1.18
MCF2-209ENST00000520602 RPL24P83731 157 aaKnown RBP7.67□□□□□ -1.18
MCF2-209ENST00000520602 RRN3P1Q2M238 152 aa7.67□□□□□ -1.18
MCF2-209ENST00000520602 OR9G4Q8NGQ1 327 aa7.67□□□□□ -1.18
MCF2-209ENST00000520602 RNF185Q96GF1 192 aa7.67□□□□□ -1.18
MCF2-209ENST00000520602 CD5LO43866 347 aa7.67□□□□□ -1.18
MCF2-209ENST00000520602 SCGB1C2P0DMR2 95 aa7.67□□□□□ -1.18
MCF2-209ENST00000520602 Q6YL49 198 aa7.67□□□□□ -1.18
MCF2-209ENST00000520602 IGHV3-53P01767 116 aa7.66□□□□□ -1.18
MCF2-209ENST00000520602 FABP2P12104 132 aa7.66□□□□□ -1.18
MCF2-209ENST00000520602 HSD52Q0P140 79 aa7.66□□□□□ -1.18
MCF2-209ENST00000520602 Q1RN00 199 aa7.66□□□□□ -1.18
MCF2-209ENST00000520602 Q8N1Y9 231 aa7.66□□□□□ -1.18
MCF2-209ENST00000520602 VCX2Q9H322 139 aa7.66□□□□□ -1.18
MCF2-209ENST00000520602 MDFICQ9P1T7 246 aa7.66□□□□□ -1.18
MCF2-209ENST00000520602 IGHV3-16A0A0C4DH30 117 aa7.66□□□□□ -1.18
MCF2-209ENST00000520602 LGALS3P17931 250 aaKnown RBP7.66□□□□□ -1.18
MCF2-209ENST00000520602 RPL35AP18077 110 aaKnown RBP7.66□□□□□ -1.18
MCF2-209ENST00000520602 PRSS2P07478 247 aa7.66□□□□□ -1.18
MCF2-209ENST00000520602 SRSF2Q01130 221 aaKnown RBP7.66□□□□□ -1.18
MCF2-209ENST00000520602 SFTA2Q6UW10 78 aa7.66□□□□□ -1.18
MCF2-209ENST00000520602 COX11Q9Y6N1 276 aa7.66□□□□□ -1.18
MCF2-209ENST00000520602 ZNF815PA8K554 130 aa7.65□□□□□ -1.18
MCF2-209ENST00000520602 PLNP26678 52 aa7.65□□□□□ -1.18
MCF2-209ENST00000520602 C18orf65Q6ZTR6 163 aa7.65□□□□□ -1.18
MCF2-209ENST00000520602 TMEM61Q8N0U2 210 aa7.65□□□□□ -1.18
MCF2-209ENST00000520602 TRGV1A0A0A0MS02 117 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms