RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 C1orf137Q5JT78 98 aa2.21□□□□□ -2.06
RNU4-60P-201ENST00000517239 SPTSSBQ8NFR3 76 aa2.21□□□□□ -2.06
RNU4-60P-201ENST00000517239 PPDPFLQ8WWR9 84 aa2.21□□□□□ -2.06
RNU4-60P-201ENST00000517239 LCN9Q8WX39 176 aa2.21□□□□□ -2.06
RNU4-60P-201ENST00000517239 PMCHL2Q9BQD1 86 aa2.21□□□□□ -2.06
RNU4-60P-201ENST00000517239 SCAPERQ9BY12 1400 aa2.21□□□□□ -2.06
RNU4-60P-201ENST00000517239 SEC16AO15027 2179 aa2.2□□□□□ -2.06
RNU4-60P-201ENST00000517239 NUMA1Q14980 2115 aa2.2□□□□□ -2.06
RNU4-60P-201ENST00000517239 TNRC6AQ8NDV7 1962 aaKnown RBP2.2□□□□□ -2.06
RNU4-60P-201ENST00000517239 DOCK2Q92608 1830 aa2.2□□□□□ -2.06
RNU4-60P-201ENST00000517239 KIF20BQ96Q89 1820 aa2.2□□□□□ -2.06
RNU4-60P-201ENST00000517239 A0A1W2PNN7 141 aa2.2□□□□□ -2.06
RNU4-60P-201ENST00000517239 F8W1H4 67 aa2.2□□□□□ -2.06
RNU4-60P-201ENST00000517239 IGKCP01834 107 aa2.2□□□□□ -2.06
RNU4-60P-201ENST00000517239 Q0VG73 95 aa2.2□□□□□ -2.06
RNU4-60P-201ENST00000517239 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.2□□□□□ -2.06
RNU4-60P-201ENST00000517239 COMMD6Q7Z4G1 85 aa2.2□□□□□ -2.06
RNU4-60P-201ENST00000517239 CYTL1Q9NRR1 136 aa2.2□□□□□ -2.06
RNU4-60P-201ENST00000517239 ATRXP46100 2492 aa2.2□□□□□ -2.06
RNU4-60P-201ENST00000517239 COL16A1Q07092 1604 aaPredicted RBP2.2□□□□□ -2.06
RNU4-60P-201ENST00000517239 SIP14410 1827 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 LTBP2Q14767 1821 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 SDK2Q58EX2 2172 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 PTPRDP23468 1912 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 DISP1Q96F81 1524 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 TRBV6-8A0A0A6YYG3 113 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 TRBV10-3A0A0K0K1G6 114 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 TMEM30CPA0ZSE6 113 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 H3BQ15 152 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 IGFBP7Q16270 282 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 TPRXLQ17RH7 258 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 C9orf116Q5BN46 136 aaPredicted RBP2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 PRR9Q5T870 116 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 KRTAP26-1Q6PEX3 210 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 OR10AG1Q8NH19 301 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 NPVFQ9HCQ7 196 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 BET1LQ9NYM9 111 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 DIDO1Q9BTC0 2240 aaKnown RBP2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 ANKRD36BQ8N2N9 1353 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 COL4A2P08572 1712 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 SUPT6HQ7KZ85 1726 aaKnown RBP2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 SHANK2Q9UPX8 1470 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 DNMBPQ6XZF7 1577 aa2.19□□□□□ -2.06
RNU4-60P-201ENST00000517239 ARHGEF12Q9NZN5 1544 aa2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 IGKV2-24A0A0C4DH68 120 aa2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 SDHAF1A6NFY7 115 aa2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 Q1T7F1 81 aa2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 KRTAP13-2Q52LG2 175 aa2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 SPACA4Q8TDM5 124 aa2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 C10orf82Q8WW14 230 aa2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 LINC00052Q96N35 136 aa2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 LINC00167Q96N53 147 aa2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 KRTAP4-8Q9BYQ9 185 aa2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 ORMDL1Q9P0S3 153 aa2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 GOLGA3Q08378 1498 aa2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 MAGI2Q86UL8 1455 aa2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 IFT140Q96RY7 1462 aa2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 HEATR1Q9H583 2144 aaKnown RBP2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 CASP8AP2Q9UKL3 1982 aa2.18□□□□□ -2.06
RNU4-60P-201ENST00000517239 KDM5DQ9BY66 1539 aa2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 TRAV13-2A0A0B4J235 113 aa2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 A0A1W2PNU3 283 aaPredicted RBP2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 hADV29S1A0JD25 119 aa2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 H3BRM9 83 aa2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 CCKP06307 115 aa2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 GNG11P61952 73 aa2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 PEA15Q15121 130 aa2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 CSAG1Q6PB30 78 aa2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 MYOZ3Q8TDC0 251 aa2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 C4orf3Q8WVX3 66 aa2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 MRPL35Q9NZE8 188 aaKnown RBP2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 COL2A1P02458 1487 aaPredicted RBP2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 HEATR5BQ9P2D3 2071 aa2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 CHD3Q12873 2000 aaKnown RBP2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 ERICH3Q5RHP9 1530 aa2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 CEP162Q5TB80 1403 aa2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 RRBP1Q9P2E9 1410 aaKnown RBP2.17□□□□□ -2.06
RNU4-60P-201ENST00000517239 ZNF142P52746 1687 aaPredicted RBP2.16□□□□□ -2.06
RNU4-60P-201ENST00000517239 CLTCQ00610 1675 aaKnown RBP2.16□□□□□ -2.06
RNU4-60P-201ENST00000517239 CDK12Q9NYV4 1490 aaPredicted RBP2.16□□□□□ -2.06
RNU4-60P-201ENST00000517239 COL1A2P08123 1366 aa2.16□□□□□ -2.06
RNU4-60P-201ENST00000517239 A8MU10 97 aa2.16□□□□□ -2.06
RNU4-60P-201ENST00000517239 FAM74A1Q5RGS3 127 aa2.16□□□□□ -2.06
RNU4-60P-201ENST00000517239 LYPD5Q6UWN5 251 aa2.16□□□□□ -2.06
RNU4-60P-201ENST00000517239 PATE1Q8WXA2 126 aa2.16□□□□□ -2.06
RNU4-60P-201ENST00000517239 LIMD2Q9BT23 127 aa2.16□□□□□ -2.06
RNU4-60P-201ENST00000517239 TOP2BQ02880 1626 aa2.16□□□□□ -2.06
RNU4-60P-201ENST00000517239 UACAQ9BZF9 1416 aa2.16□□□□□ -2.06
RNU4-60P-201ENST00000517239 TRBV10-1A0A0K0K1A3 114 aa2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 LOC100996750A0A140TA64 210 aa2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 NAP1L6A6NFF2 107 aa2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 CRYM-AS1A6NIL9 109 aa2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 H3BRN7 92 aa2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 K7EP34 96 aa2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 ATOX1O00244 68 aa2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 CCL16O15467 120 aa2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 NUPR1O60356 82 aa2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 FAUP35544 74 aaKnown RBP2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 ASIPP42127 132 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms