RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 ATP11AUNQ6ZP68 121 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 SLC51BQ86UW2 128 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 BRK1Q8WUW1 75 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 AHSPQ9NZD4 102 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 HECW1Q76N89 1606 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 SETBP1Q9Y6X0 1596 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 TULP4Q9NRJ4 1543 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 WDFY3Q8IZQ1 3526 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 PARP14Q460N5 1801 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 NUP210Q8TEM1 1887 aaPredicted RBP-3.87□□□□□ -3.03
SNORA40.16-201ENST00000517238 CXorf51AA0A1B0GTR3 108 aa-3.87□□□□□ -3.03
SNORA40.16-201ENST00000517238 LINC00959A0A1B0GUT2 108 aa-3.87□□□□□ -3.03
SNORA40.16-201ENST00000517238 CCDC169A6NNP5 214 aa-3.87□□□□□ -3.03
SNORA40.16-201ENST00000517238 HLA-DRB1P01911 266 aa-3.87□□□□□ -3.03
SNORA40.16-201ENST00000517238 DYNLT3P51808 116 aa-3.87□□□□□ -3.03
SNORA40.16-201ENST00000517238 MLLT11Q13015 90 aaPredicted RBP-3.87□□□□□ -3.03
SNORA40.16-201ENST00000517238 HSP90AA4PQ58FG1 418 aa-3.87□□□□□ -3.03
SNORA40.16-201ENST00000517238 STX19Q8N4C7 294 aa-3.87□□□□□ -3.03
SNORA40.16-201ENST00000517238 FAM216BQ8N7L0 139 aa-3.87□□□□□ -3.03
SNORA40.16-201ENST00000517238 DIRC1Q969H9 104 aa-3.87□□□□□ -3.03
SNORA40.16-201ENST00000517238 C2orf50Q96LR7 162 aa-3.87□□□□□ -3.03
SNORA40.16-201ENST00000517238 CMSS1Q9BQ75 279 aaKnown RBP-3.87□□□□□ -3.03
SNORA40.16-201ENST00000517238 PRTFDC1Q9NRG1 225 aa-3.87□□□□□ -3.03
SNORA40.16-201ENST00000517238 CRIPTQ9P021 101 aa-3.87□□□□□ -3.03
SNORA40.16-201ENST00000517238 CEP350Q5VT06 3117 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 CFAP54Q96N23 3096 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 ZNF236Q9UL36 1845 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 TRAV26-2A0A0B4J265 109 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 EDF1O60869 148 aaKnown RBP-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 IFNA5P01569 189 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 IFNA4P05014 189 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 IL3P08700 152 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 NQO2P16083 231 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 PVALBP20472 110 aaPredicted RBP-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 HADHBP55084 474 aaKnown RBP-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 DNAL1Q4LDG9 190 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 AKR1C8PQ5T2L2 129 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 AHSA2Q719I0 299 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 KRT222Q8N1A0 295 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 MGARPQ8TDB4 240 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 CT55Q8WUE5 264 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 CERS2Q96G23 380 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 TEX37Q96LM6 180 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 C20orf27Q9GZN8 174 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 NDUFA4L2Q9NRX3 87 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 ALKQ9UM73 1620 aa-3.88□□□□□ -3.03
SNORA40.16-201ENST00000517238 FYCO1Q9BQS8 1478 aa-3.89□□□□□ -3.03
SNORA40.16-201ENST00000517238 A0A1B0GV50 99 aa-3.89□□□□□ -3.03
SNORA40.16-201ENST00000517238 GTF2A1P52655 376 aaPredicted RBP-3.89□□□□□ -3.03
SNORA40.16-201ENST00000517238 NDUFA6P56556 154 aa-3.89□□□□□ -3.03
SNORA40.16-201ENST00000517238 SLAMF1Q13291 335 aa-3.89□□□□□ -3.03
SNORA40.16-201ENST00000517238 BLIDQ8IZY5 108 aa-3.89□□□□□ -3.03
SNORA40.16-201ENST00000517238 PDCL2Q8N4E4 241 aa-3.89□□□□□ -3.03
SNORA40.16-201ENST00000517238 IFI27L1Q96BM0 104 aa-3.89□□□□□ -3.03
SNORA40.16-201ENST00000517238 NDUFAF1Q9Y375 327 aa-3.89□□□□□ -3.03
SNORA40.16-201ENST00000517238 MPC1Q9Y5U8 109 aa-3.89□□□□□ -3.03
SNORA40.16-201ENST00000517238 ABCC9O60706 1549 aa-3.9□□□□□ -3.03
SNORA40.16-201ENST00000517238 NEO1Q92859 1461 aa-3.9□□□□□ -3.03
SNORA40.16-201ENST00000517238 CEP164Q9UPV0 1460 aa-3.9□□□□□ -3.03
SNORA40.16-201ENST00000517238 LRP5O75197 1615 aa-3.9□□□□□ -3.03
SNORA40.16-201ENST00000517238 I3L3M4 83 aa-3.9□□□□□ -3.03
SNORA40.16-201ENST00000517238 TMEM256-PLSCR3K7ERE1 68 aa-3.9□□□□□ -3.03
SNORA40.16-201ENST00000517238 BIRC5O15392 142 aa-3.9□□□□□ -3.03
SNORA40.16-201ENST00000517238 ATP5IP56385 69 aaPredicted RBP-3.9□□□□□ -3.03
SNORA40.16-201ENST00000517238 CLDN8P56748 225 aa-3.9□□□□□ -3.03
SNORA40.16-201ENST00000517238 CST9Q5W186 159 aa-3.9□□□□□ -3.03
SNORA40.16-201ENST00000517238 TMEM86BQ8N661 226 aa-3.9□□□□□ -3.03
SNORA40.16-201ENST00000517238 RASD2Q96D21 266 aa-3.9□□□□□ -3.03
SNORA40.16-201ENST00000517238 MAP1LC3BQ9GZQ8 125 aa-3.9□□□□□ -3.03
SNORA40.16-201ENST00000517238 MYH7P12883 1935 aa-3.9□□□□□ -3.03
SNORA40.16-201ENST00000517238 USP54Q70EL1 1684 aa-3.9□□□□□ -3.03
SNORA40.16-201ENST00000517238 TRPM1Q7Z4N2 1603 aa-3.91□□□□□ -3.03
SNORA40.16-201ENST00000517238 A0A087WUJ7 227 aa-3.91□□□□□ -3.04
SNORA40.16-201ENST00000517238 K7EPI3 171 aa-3.91□□□□□ -3.04
SNORA40.16-201ENST00000517238 CYBAP13498 195 aa-3.91□□□□□ -3.04
SNORA40.16-201ENST00000517238 PRLHP81277 87 aa-3.91□□□□□ -3.04
SNORA40.16-201ENST00000517238 TMEM170BQ5T4T1 132 aa-3.91□□□□□ -3.04
SNORA40.16-201ENST00000517238 ANKRD29Q8N6D5 301 aa-3.91□□□□□ -3.04
SNORA40.16-201ENST00000517238 PRELID3AQ96N28 172 aa-3.91□□□□□ -3.04
SNORA40.16-201ENST00000517238 SMIM7Q9BQ49 75 aa-3.91□□□□□ -3.04
SNORA40.16-201ENST00000517238 KIF1BO60333 1816 aa-3.91□□□□□ -3.04
SNORA40.16-201ENST00000517238 IBTKQ9P2D0 1353 aaPredicted RBP-3.91□□□□□ -3.04
SNORA40.16-201ENST00000517238 MAGI2Q86UL8 1455 aa-3.92□□□□□ -3.04
SNORA40.16-201ENST00000517238 FRMPD1Q5SYB0 1578 aa-3.92□□□□□ -3.04
SNORA40.16-201ENST00000517238 RIMS2Q9UQ26 1411 aa-3.92□□□□□ -3.04
SNORA40.16-201ENST00000517238 M0R135 149 aa-3.92□□□□□ -3.04
SNORA40.16-201ENST00000517238 GGCTO75223 188 aaKnown RBP-3.92□□□□□ -3.04
SNORA40.16-201ENST00000517238 SERPINA6P08185 405 aa-3.92□□□□□ -3.04
SNORA40.16-201ENST00000517238 RPS17P08708 135 aaKnown RBP-3.92□□□□□ -3.04
SNORA40.16-201ENST00000517238 RPS20P60866 119 aaKnown RBP-3.92□□□□□ -3.04
SNORA40.16-201ENST00000517238 RSU1Q15404 277 aa-3.92□□□□□ -3.04
SNORA40.16-201ENST00000517238 RRN3P1Q2M238 152 aa-3.92□□□□□ -3.04
SNORA40.16-201ENST00000517238 LYRM7Q5U5X0 104 aa-3.92□□□□□ -3.04
SNORA40.16-201ENST00000517238 TSEN15Q8WW01 171 aaKnown RBP-3.92□□□□□ -3.04
SNORA40.16-201ENST00000517238 HIGD1BQ9P298 99 aa-3.92□□□□□ -3.04
SNORA40.16-201ENST00000517238 NKTRP30414 1462 aaKnown RBP-3.92□□□□□ -3.04
SNORA40.16-201ENST00000517238 TRAPPC8Q9Y2L5 1435 aa-3.93□□□□□ -3.04
SNORA40.16-201ENST00000517238 ARHGEF12Q9NZN5 1544 aa-3.93□□□□□ -3.04
SNORA40.16-201ENST00000517238 K7ERJ3 54 aa-3.93□□□□□ -3.04
SNORA40.16-201ENST00000517238 SMIM17P0DL12 118 aa-3.93□□□□□ -3.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms