RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 PVALBP20472 110 aaPredicted RBP5.42□□□□□ -1.54
SCARNA20.3-201ENST00000516913 UBE2L3P68036 154 aaKnown RBP5.42□□□□□ -1.54
SCARNA20.3-201ENST00000516913 HBG1P69891 147 aa5.42□□□□□ -1.54
SCARNA20.3-201ENST00000516913 HBG2P69892 147 aa5.42□□□□□ -1.54
SCARNA20.3-201ENST00000516913 FFAR4Q5NUL3 377 aa5.42□□□□□ -1.54
SCARNA20.3-201ENST00000516913 SCXQ7RTU7 201 aa5.42□□□□□ -1.54
SCARNA20.3-201ENST00000516913 LINC00528Q8N1L1 170 aa5.42□□□□□ -1.54
SCARNA20.3-201ENST00000516913 INO80EQ8NBZ0 244 aaPredicted RBP5.42□□□□□ -1.54
SCARNA20.3-201ENST00000516913 LINC00479Q96M42 142 aa5.42□□□□□ -1.54
SCARNA20.3-201ENST00000516913 ZNF471Q9BX82 626 aaPredicted RBP5.42□□□□□ -1.54
SCARNA20.3-201ENST00000516913 OTORQ9NRC9 128 aa5.42□□□□□ -1.54
SCARNA20.3-201ENST00000516913 RPH3ALQ9UNE2 315 aa5.42□□□□□ -1.54
SCARNA20.3-201ENST00000516913 TRAV9-2A0A087WT02 112 aa5.41□□□□□ -1.54
SCARNA20.3-201ENST00000516913 IGKV3D-20A0A0C4DH25 116 aa5.41□□□□□ -1.54
SCARNA20.3-201ENST00000516913 FAM229AH3BQW9 127 aa5.41□□□□□ -1.54
SCARNA20.3-201ENST00000516913 PET100P0DJ07 73 aa5.41□□□□□ -1.54
SCARNA20.3-201ENST00000516913 ZNF506Q5JVG8 444 aa5.41□□□□□ -1.54
SCARNA20.3-201ENST00000516913 FAM159AQ6UWV7 190 aa5.41□□□□□ -1.54
SCARNA20.3-201ENST00000516913 C14orf178Q8N769 122 aaPredicted RBP5.41□□□□□ -1.54
SCARNA20.3-201ENST00000516913 NHLRC2Q8NBF2 726 aa5.41□□□□□ -1.54
SCARNA20.3-201ENST00000516913 STOML3Q8TAV4 291 aa5.41□□□□□ -1.54
SCARNA20.3-201ENST00000516913 TMED6Q8WW62 240 aa5.41□□□□□ -1.54
SCARNA20.3-201ENST00000516913 BAALCQ8WXS3 180 aa5.41□□□□□ -1.54
SCARNA20.3-201ENST00000516913 ATP5SQ99766 215 aa5.41□□□□□ -1.54
SCARNA20.3-201ENST00000516913 LENEPQ9Y5L5 61 aa5.41□□□□□ -1.54
SCARNA20.3-201ENST00000516913 TRGV11A0A075B6L2 103 aa5.4□□□□□ -1.54
SCARNA20.3-201ENST00000516913 KANTRA0A1W2PQU2 76 aa5.4□□□□□ -1.54
SCARNA20.3-201ENST00000516913 K7EP13 123 aa5.4□□□□□ -1.54
SCARNA20.3-201ENST00000516913 CRIP1P50238 77 aa5.4□□□□□ -1.54
SCARNA20.3-201ENST00000516913 ZNF876PQ49A33 203 aa5.4□□□□□ -1.54
SCARNA20.3-201ENST00000516913 LELP1Q5T871 98 aa5.4□□□□□ -1.54
SCARNA20.3-201ENST00000516913 SUN5Q8TC36 379 aa5.4□□□□□ -1.54
SCARNA20.3-201ENST00000516913 TXNDC17Q9BRA2 123 aa5.4□□□□□ -1.54
SCARNA20.3-201ENST00000516913 SH3BGRL3Q9H299 93 aa5.4□□□□□ -1.54
SCARNA20.3-201ENST00000516913 TREM1Q9NP99 234 aa5.4□□□□□ -1.54
SCARNA20.3-201ENST00000516913 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.39□□□□□ -1.55
SCARNA20.3-201ENST00000516913 TRAV21A0A0B4J279 112 aa5.39□□□□□ -1.55
SCARNA20.3-201ENST00000516913 TRBV6-4A0A1B0GX49 114 aa5.39□□□□□ -1.55
SCARNA20.3-201ENST00000516913 FBLL1A6NHQ2 334 aaKnown RBP5.39□□□□□ -1.55
SCARNA20.3-201ENST00000516913 GGTLC3B5MD39 225 aa5.39□□□□□ -1.55
SCARNA20.3-201ENST00000516913 TEX46H3BTG2 121 aa5.39□□□□□ -1.55
SCARNA20.3-201ENST00000516913 PANO1I0J062 215 aa5.39□□□□□ -1.55
SCARNA20.3-201ENST00000516913 J3QL48 77 aa5.39□□□□□ -1.55
SCARNA20.3-201ENST00000516913 TAAR5O14804 337 aa5.39□□□□□ -1.55
SCARNA20.3-201ENST00000516913 IFNA7P01567 189 aa5.39□□□□□ -1.55
SCARNA20.3-201ENST00000516913 OR10J3Q5JRS4 329 aa5.39□□□□□ -1.55
SCARNA20.3-201ENST00000516913 CLLU1Q5K131 121 aa5.39□□□□□ -1.55
SCARNA20.3-201ENST00000516913 C10orf126Q8N4M7 172 aa5.39□□□□□ -1.55
SCARNA20.3-201ENST00000516913 CIRBP-AS1Q8TBR5 109 aa5.39□□□□□ -1.55
SCARNA20.3-201ENST00000516913 GTSF1LQ9H1H1 148 aa5.39□□□□□ -1.55
SCARNA20.3-201ENST00000516913 LPAP08519 4548 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 TRAV34A0A0B4J273 112 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 LINC00862A6NCI5 91 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 GAGE12JA6NER3 117 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 ATP6V1G1O75348 118 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 GCGP01275 180 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 TCRAP04437 139 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 ARL14EPLP0DKL9 152 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 MT1HL1P0DM35 61 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 TPT1P13693 172 aaKnown RBP5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 ATP6V0CP27449 155 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 CSN1S1P47710 185 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 GAGE1Q13065 139 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 GAGE4Q13068 117 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 GAGE5Q13069 117 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 ZNF726P1Q15940 193 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 GAGE13Q4V321 117 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 HSD17B11Q8NBQ5 300 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 ATP6V0E2Q8NHE4 81 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 DAZAP1Q96EP5 407 aaKnown RBP5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 PARLQ9H300 379 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 PSG8Q9UQ74 426 aa5.38□□□□□ -1.55
SCARNA20.3-201ENST00000516913 PSCAO43653 123 aa5.37□□□□□ -1.55
SCARNA20.3-201ENST00000516913 PFN1P07737 140 aaKnown RBP5.37□□□□□ -1.55
SCARNA20.3-201ENST00000516913 STAG3L2P0CL84 134 aa5.37□□□□□ -1.55
SCARNA20.3-201ENST00000516913 STAG3L3P0CL85 134 aa5.37□□□□□ -1.55
SCARNA20.3-201ENST00000516913 FHITP49789 147 aa5.37□□□□□ -1.55
SCARNA20.3-201ENST00000516913 PPT1P50897 306 aa5.37□□□□□ -1.55
SCARNA20.3-201ENST00000516913 ODF1Q14990 250 aa5.37□□□□□ -1.55
SCARNA20.3-201ENST00000516913 DMRTA1Q5VZB9 504 aa5.37□□□□□ -1.55
SCARNA20.3-201ENST00000516913 PTH2Q96A98 100 aa5.37□□□□□ -1.55
SCARNA20.3-201ENST00000516913 SDF2L1Q9HCN8 221 aa5.37□□□□□ -1.55
SCARNA20.3-201ENST00000516913 SEC11BP0C7V7 166 aa5.36□□□□□ -1.55
SCARNA20.3-201ENST00000516913 SULT1A2P50226 295 aa5.36□□□□□ -1.55
SCARNA20.3-201ENST00000516913 KHDC3LQ587J8 217 aa5.36□□□□□ -1.55
SCARNA20.3-201ENST00000516913 ARL6IP6Q8N6S5 226 aa5.36□□□□□ -1.55
SCARNA20.3-201ENST00000516913 RAB24Q969Q5 203 aa5.36□□□□□ -1.55
SCARNA20.3-201ENST00000516913 CHAC1Q9BUX1 264 aa5.36□□□□□ -1.55
SCARNA20.3-201ENST00000516913 BORCS7-ASMTA0A0B4J1R7 106 aa5.35□□□□□ -1.55
SCARNA20.3-201ENST00000516913 TRAV8-6A0A0B4J262 113 aa5.35□□□□□ -1.55
SCARNA20.3-201ENST00000516913 GCHFRP30047 84 aa5.35□□□□□ -1.55
SCARNA20.3-201ENST00000516913 SUMO1P63165 101 aaKnown RBP5.35□□□□□ -1.55
SCARNA20.3-201ENST00000516913 SRSF3P84103 164 aaKnown RBP5.35□□□□□ -1.55
SCARNA20.3-201ENST00000516913 LAGE3Q14657 143 aa5.35□□□□□ -1.55
SCARNA20.3-201ENST00000516913 RHOHQ15669 191 aa5.35□□□□□ -1.55
SCARNA20.3-201ENST00000516913 KRTAP26-1Q6PEX3 210 aa5.35□□□□□ -1.55
SCARNA20.3-201ENST00000516913 PRNTQ86SH4 94 aa5.35□□□□□ -1.55
SCARNA20.3-201ENST00000516913 NIT1Q86X76 327 aa5.35□□□□□ -1.55
SCARNA20.3-201ENST00000516913 OR10G9Q8NGN4 311 aa5.35□□□□□ -1.55
SCARNA20.3-201ENST00000516913 OR10G7Q8NGN6 311 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms