RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 Q86TA4 180 aa1.08□□□□□ -2.24
SCARNA15.2-201ENST00000516409 MRPL35Q9NZE8 188 aaKnown RBP1.08□□□□□ -2.24
SCARNA15.2-201ENST00000516409 CCDC167Q9P0B6 97 aa1.08□□□□□ -2.24
SCARNA15.2-201ENST00000516409 NDUFA12Q9UI09 145 aa1.08□□□□□ -2.24
SCARNA15.2-201ENST00000516409 ROCK2O75116 1388 aaKnown RBP1.08□□□□□ -2.24
SCARNA15.2-201ENST00000516409 NINQ8N4C6 2090 aa1.08□□□□□ -2.24
SCARNA15.2-201ENST00000516409 SNRNP200O75643 2136 aaKnown RBP1.07□□□□□ -2.24
SCARNA15.2-201ENST00000516409 CASZ1Q86V15 1759 aa1.07□□□□□ -2.24
SCARNA15.2-201ENST00000516409 TRAV12-2A0A075B6T6 113 aa1.07□□□□□ -2.24
SCARNA15.2-201ENST00000516409 TRBV10-1A0A0K0K1A3 114 aa1.07□□□□□ -2.24
SCARNA15.2-201ENST00000516409 LOC100130705A0A1B0GUX0 176 aa1.07□□□□□ -2.24
SCARNA15.2-201ENST00000516409 HIGD1CA8MV81 97 aa1.07□□□□□ -2.24
SCARNA15.2-201ENST00000516409 LINC00587B1AMM8 73 aa1.07□□□□□ -2.24
SCARNA15.2-201ENST00000516409 IL5P05113 134 aa1.07□□□□□ -2.24
SCARNA15.2-201ENST00000516409 MEIG1Q5JSS6 88 aa1.07□□□□□ -2.24
SCARNA15.2-201ENST00000516409 PDCD10Q9BUL8 212 aa1.07□□□□□ -2.24
SCARNA15.2-201ENST00000516409 MYH13Q9UKX3 1938 aa1.07□□□□□ -2.24
SCARNA15.2-201ENST00000516409 GRIN2AQ12879 1464 aa1.06□□□□□ -2.24
SCARNA15.2-201ENST00000516409 FLG2Q5D862 2391 aaPredicted RBP1.06□□□□□ -2.24
SCARNA15.2-201ENST00000516409 FAM92AA1XBS5 289 aa1.06□□□□□ -2.24
SCARNA15.2-201ENST00000516409 Q6ZQY7 126 aa1.06□□□□□ -2.24
SCARNA15.2-201ENST00000516409 IFI27L1Q96BM0 104 aa1.06□□□□□ -2.24
SCARNA15.2-201ENST00000516409 LINC00208Q96KT6 92 aa1.06□□□□□ -2.24
SCARNA15.2-201ENST00000516409 CCL19Q99731 98 aa1.06□□□□□ -2.24
SCARNA15.2-201ENST00000516409 SEC11CQ9BY50 192 aa1.06□□□□□ -2.24
SCARNA15.2-201ENST00000516409 TMEM242Q9NWH2 141 aa1.06□□□□□ -2.24
SCARNA15.2-201ENST00000516409 DLG5Q8TDM6 1919 aa1.06□□□□□ -2.24
SCARNA15.2-201ENST00000516409 TMEM2Q9UHN6 1383 aa1.06□□□□□ -2.24
SCARNA15.2-201ENST00000516409 MYH6P13533 1939 aa1.05□□□□□ -2.24
SCARNA15.2-201ENST00000516409 ADGRB1O14514 1584 aa1.05□□□□□ -2.24
SCARNA15.2-201ENST00000516409 NBDYA0A0U1RRE5 68 aa1.05□□□□□ -2.24
SCARNA15.2-201ENST00000516409 CCDC179H3BU77 68 aa1.05□□□□□ -2.24
SCARNA15.2-201ENST00000516409 FXYD3Q14802 87 aa1.05□□□□□ -2.24
SCARNA15.2-201ENST00000516409 SPANXN1Q5VSR9 72 aa1.05□□□□□ -2.24
SCARNA15.2-201ENST00000516409 XAF1Q6GPH4 301 aa1.05□□□□□ -2.24
SCARNA15.2-201ENST00000516409 OR2T2Q6IF00 324 aa1.05□□□□□ -2.24
SCARNA15.2-201ENST00000516409 KRTAP5-7Q6L8G8 165 aa1.05□□□□□ -2.24
SCARNA15.2-201ENST00000516409 ZGRF1Q86YA3 2104 aa1.05□□□□□ -2.24
SCARNA15.2-201ENST00000516409 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.05□□□□□ -2.24
SCARNA15.2-201ENST00000516409 SPTSSAQ969W0 71 aa1.05□□□□□ -2.24
SCARNA15.2-201ENST00000516409 MYOM3Q5VTT5 1437 aa1.05□□□□□ -2.24
SCARNA15.2-201ENST00000516409 MUC6Q6W4X9 2439 aa1.04□□□□□ -2.24
SCARNA15.2-201ENST00000516409 KIF13AQ9H1H9 1805 aa1.04□□□□□ -2.24
SCARNA15.2-201ENST00000516409 TRBV30A0A0K0K1B3 111 aa1.04□□□□□ -2.24
SCARNA15.2-201ENST00000516409 SNCGO76070 127 aa1.04□□□□□ -2.24
SCARNA15.2-201ENST00000516409 UBE2G1P62253 170 aa1.04□□□□□ -2.24
SCARNA15.2-201ENST00000516409 S100A7L2Q5SY68 101 aa1.04□□□□□ -2.24
SCARNA15.2-201ENST00000516409 DEFB132Q7Z7B7 95 aa1.04□□□□□ -2.24
SCARNA15.2-201ENST00000516409 C5orf56Q8N8D9 126 aa1.04□□□□□ -2.24
SCARNA15.2-201ENST00000516409 TSKUQ8WUA8 353 aa1.04□□□□□ -2.24
SCARNA15.2-201ENST00000516409 TMEM141Q96I45 108 aa1.04□□□□□ -2.24
SCARNA15.2-201ENST00000516409 C2orf88Q9BSF0 95 aa1.04□□□□□ -2.24
SCARNA15.2-201ENST00000516409 AGPAT4-IT1Q9H0P7 198 aa1.04□□□□□ -2.24
SCARNA15.2-201ENST00000516409 PTPRMP28827 1452 aa1.04□□□□□ -2.24
SCARNA15.2-201ENST00000516409 COL6A6A6NMZ7 2263 aa1.04□□□□□ -2.24
SCARNA15.2-201ENST00000516409 PEAK1Q9H792 1746 aa1.03□□□□□ -2.24
SCARNA15.2-201ENST00000516409 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.03□□□□□ -2.24
SCARNA15.2-201ENST00000516409 SPAARA0A1B0GVQ0 90 aa1.03□□□□□ -2.24
SCARNA15.2-201ENST00000516409 FXYD1O00168 92 aa1.03□□□□□ -2.24
SCARNA15.2-201ENST00000516409 APOC1P02654 83 aa1.03□□□□□ -2.24
SCARNA15.2-201ENST00000516409 APODP05090 189 aa1.03□□□□□ -2.24
SCARNA15.2-201ENST00000516409 NPC2P61916 151 aa1.03□□□□□ -2.24
SCARNA15.2-201ENST00000516409 ZNF56Q15929 161 aa1.03□□□□□ -2.24
SCARNA15.2-201ENST00000516409 SLC48A1Q6P1K1 146 aa1.03□□□□□ -2.24
SCARNA15.2-201ENST00000516409 LINC00575Q6W349 94 aa1.03□□□□□ -2.24
SCARNA15.2-201ENST00000516409 SNRNP25Q9BV90 132 aaKnown RBP1.03□□□□□ -2.24
SCARNA15.2-201ENST00000516409 NCOA3Q9Y6Q9 1424 aa1.03□□□□□ -2.24
SCARNA15.2-201ENST00000516409 CDK12Q9NYV4 1490 aaPredicted RBP1.03□□□□□ -2.24
SCARNA15.2-201ENST00000516409 PHLPP1O60346 1717 aa1.03□□□□□ -2.24
SCARNA15.2-201ENST00000516409 TRIOBPQ9H2D6 2365 aa1.03□□□□□ -2.25
SCARNA15.2-201ENST00000516409 NDUFB6O95139 128 aa1.02□□□□□ -2.25
SCARNA15.2-201ENST00000516409 PIPP12273 146 aaPredicted RBP1.02□□□□□ -2.25
SCARNA15.2-201ENST00000516409 CAV3P56539 151 aa1.02□□□□□ -2.25
SCARNA15.2-201ENST00000516409 C9orf116Q5BN46 136 aaPredicted RBP1.02□□□□□ -2.25
SCARNA15.2-201ENST00000516409 RPL7L1Q6DKI1 246 aaKnown RBP1.02□□□□□ -2.25
SCARNA15.2-201ENST00000516409 Q8N6K4 173 aa1.02□□□□□ -2.25
SCARNA15.2-201ENST00000516409 LSM10Q969L4 123 aaKnown RBP1.02□□□□□ -2.25
SCARNA15.2-201ENST00000516409 MBD5Q9P267 1494 aa1.02□□□□□ -2.25
SCARNA15.2-201ENST00000516409 MED12Q93074 2177 aa1.01□□□□□ -2.25
SCARNA15.2-201ENST00000516409 TRAV12-3A0A0B4J271 114 aa1.01□□□□□ -2.25
SCARNA15.2-201ENST00000516409 TCRBV3S1A0A5B6 114 aa1.01□□□□□ -2.25
SCARNA15.2-201ENST00000516409 A6NIN4 97 aa1.01□□□□□ -2.25
SCARNA15.2-201ENST00000516409 AKAIN1P0CW23 69 aa1.01□□□□□ -2.25
SCARNA15.2-201ENST00000516409 ARL14EPLP0DKL9 152 aa1.01□□□□□ -2.25
SCARNA15.2-201ENST00000516409 NDUFA11Q86Y39 141 aa1.01□□□□□ -2.25
SCARNA15.2-201ENST00000516409 COPS9Q8WXC6 57 aa1.01□□□□□ -2.25
SCARNA15.2-201ENST00000516409 RERGLQ9H628 205 aa1.01□□□□□ -2.25
SCARNA15.2-201ENST00000516409 SCN3BQ9NY72 215 aa1.01□□□□□ -2.25
SCARNA15.2-201ENST00000516409 ASCC3Q8N3C0 2202 aaKnown RBP1.01□□□□□ -2.25
SCARNA15.2-201ENST00000516409 CITO14578 2027 aa1.01□□□□□ -2.25
SCARNA15.2-201ENST00000516409 TEX49A0A1B0GTD5 131 aa1□□□□□ -2.25
SCARNA15.2-201ENST00000516409 A0A1W2PPM0 123 aa1□□□□□ -2.25
SCARNA15.2-201ENST00000516409 FGF7P21781 194 aa1□□□□□ -2.25
SCARNA15.2-201ENST00000516409 Q6ZS92 163 aa1□□□□□ -2.25
SCARNA15.2-201ENST00000516409 CYP2G1PQ6ZSU1 146 aa1□□□□□ -2.25
SCARNA15.2-201ENST00000516409 SPTSSBQ8NFR3 76 aa1□□□□□ -2.25
SCARNA15.2-201ENST00000516409 C10orf82Q8WW14 230 aa1□□□□□ -2.25
SCARNA15.2-201ENST00000516409 NAA60Q9H7X0 242 aa1□□□□□ -2.25
SCARNA15.2-201ENST00000516409 RPRMQ9NS64 109 aa1□□□□□ -2.25
SCARNA15.2-201ENST00000516409 FOCADQ5VW36 1801 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms