RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 LINC01545Q5VT33 79 aa11.37□□□□□ -0.59
SDHA-218ENST00000515752 TSSC4Q9Y5U2 329 aaPredicted RBP11.37□□□□□ -0.59
SDHA-218ENST00000515752 A0A096LNJ9 63 aa11.37□□□□□ -0.59
SDHA-218ENST00000515752 CD7P09564 240 aa11.37□□□□□ -0.59
SDHA-218ENST00000515752 FCER1GP30273 86 aa11.37□□□□□ -0.59
SDHA-218ENST00000515752 HILS1P60008 231 aa11.37□□□□□ -0.59
SDHA-218ENST00000515752 FHL3Q13643 280 aa11.37□□□□□ -0.59
SDHA-218ENST00000515752 NRACQ8N912 160 aa11.37□□□□□ -0.59
SDHA-218ENST00000515752 PDZD2O15018 2839 aa11.36□□□□□ -0.59
SDHA-218ENST00000515752 A8MTW9 85 aa11.36□□□□□ -0.59
SDHA-218ENST00000515752 K7EMI3 77 aa11.36□□□□□ -0.59
SDHA-218ENST00000515752 SMIM17P0DL12 118 aa11.36□□□□□ -0.59
SDHA-218ENST00000515752 IGLC3P0DOY3 106 aa11.36□□□□□ -0.59
SDHA-218ENST00000515752 HLA-DRB4P13762 266 aa11.36□□□□□ -0.59
SDHA-218ENST00000515752 DEFB114Q30KQ6 69 aa11.36□□□□□ -0.59
SDHA-218ENST00000515752 SPAG8Q99932 426 aaPredicted RBP11.36□□□□□ -0.59
SDHA-218ENST00000515752 C20orf78Q9BR46 151 aa11.36□□□□□ -0.59
SDHA-218ENST00000515752 ST20Q9HBF5 79 aa11.36□□□□□ -0.59
SDHA-218ENST00000515752 HLA-DRB4X5D2U9 266 aa11.36□□□□□ -0.59
SDHA-218ENST00000515752 FLNAP21333 2647 aaKnown RBP11.35□□□□□ -0.59
SDHA-218ENST00000515752 AMTNQ6UX39 209 aa11.35□□□□□ -0.59
SDHA-218ENST00000515752 TMEM61Q8N0U2 210 aa11.35□□□□□ -0.59
SDHA-218ENST00000515752 ATOH7Q8N100 152 aa11.35□□□□□ -0.59
SDHA-218ENST00000515752 POM121L12Q8N7R1 296 aa11.35□□□□□ -0.59
SDHA-218ENST00000515752 SYT8Q8NBV8 401 aa11.35□□□□□ -0.59
SDHA-218ENST00000515752 LINC01006Q8NI28 216 aa11.35□□□□□ -0.59
SDHA-218ENST00000515752 IGHV1OR15-1A0A075B7D0 117 aa11.35□□□□□ -0.59
SDHA-218ENST00000515752 M0R143 59 aa11.35□□□□□ -0.59
SDHA-218ENST00000515752 CCL24O00175 119 aa11.35□□□□□ -0.59
SDHA-218ENST00000515752 DEFB131AP59861 70 aa11.35□□□□□ -0.59
SDHA-218ENST00000515752 RAX2Q96IS3 184 aa11.35□□□□□ -0.59
SDHA-218ENST00000515752 IGLV2-18A0A075B6J9 118 aa11.34□□□□□ -0.59
SDHA-218ENST00000515752 TRGV11A0A075B6L2 103 aa11.34□□□□□ -0.59
SDHA-218ENST00000515752 NDUFA7O95182 113 aa11.34□□□□□ -0.59
SDHA-218ENST00000515752 IGKV3-20P01619 116 aa11.34□□□□□ -0.59
SDHA-218ENST00000515752 SPINK13Q1W4C9 94 aa11.34□□□□□ -0.59
SDHA-218ENST00000515752 LGALS9BQ3B8N2 356 aa11.34□□□□□ -0.59
SDHA-218ENST00000515752 LGALS9CQ6DKI2 356 aa11.34□□□□□ -0.59
SDHA-218ENST00000515752 C14orf178Q8N769 122 aaPredicted RBP11.34□□□□□ -0.59
SDHA-218ENST00000515752 IFI27L1Q96BM0 104 aa11.34□□□□□ -0.59
SDHA-218ENST00000515752 DUX3Q96PT4 197 aa11.34□□□□□ -0.59
SDHA-218ENST00000515752 MYO9AB2RTY4 2548 aa11.34□□□□□ -0.59
SDHA-218ENST00000515752 UNC79Q9P2D8 2635 aa11.34□□□□□ -0.59
SDHA-218ENST00000515752 TLN2Q9Y4G6 2542 aa11.33□□□□□ -0.59
SDHA-218ENST00000515752 H3BMM0 161 aa11.33□□□□□ -0.6
SDHA-218ENST00000515752 GAS8-AS1O95177 125 aa11.33□□□□□ -0.6
SDHA-218ENST00000515752 GATA1P15976 413 aaPredicted RBP11.33□□□□□ -0.6
SDHA-218ENST00000515752 LAGE3Q14657 143 aa11.33□□□□□ -0.6
SDHA-218ENST00000515752 C9orf85Q96MD7 179 aa11.33□□□□□ -0.6
SDHA-218ENST00000515752 C2orf88Q9BSF0 95 aa11.33□□□□□ -0.6
SDHA-218ENST00000515752 IGHV3-16A0A0C4DH30 117 aa11.32□□□□□ -0.6
SDHA-218ENST00000515752 CD28P10747 220 aa11.32□□□□□ -0.6
SDHA-218ENST00000515752 IGLL1P15814 213 aa11.32□□□□□ -0.6
SDHA-218ENST00000515752 CLUHP3Q96NS8 147 aa11.32□□□□□ -0.6
SDHA-218ENST00000515752 TRAV12-2A0A075B6T6 113 aa11.32□□□□□ -0.6
SDHA-218ENST00000515752 TRAV26-2A0A0B4J265 109 aa11.32□□□□□ -0.6
SDHA-218ENST00000515752 SUMO2P61956 95 aaKnown RBP11.32□□□□□ -0.6
SDHA-218ENST00000515752 H0Y8G0 127 aa11.31□□□□□ -0.6
SDHA-218ENST00000515752 ATP5LO75964 103 aa11.31□□□□□ -0.6
SDHA-218ENST00000515752 CD300EQ496F6 205 aaPredicted RBP11.31□□□□□ -0.6
SDHA-218ENST00000515752 ORMDL2Q53FV1 153 aa11.31□□□□□ -0.6
SDHA-218ENST00000515752 SMIM2Q9BVW6 85 aa11.31□□□□□ -0.6
SDHA-218ENST00000515752 CMC4P56277 68 aaPredicted RBP11.3□□□□□ -0.6
SDHA-218ENST00000515752 RPL32P62910 135 aaKnown RBP11.3□□□□□ -0.6
SDHA-218ENST00000515752 Q6ZN92 141 aa11.3□□□□□ -0.6
SDHA-218ENST00000515752 Q8N1Y9 231 aa11.3□□□□□ -0.6
SDHA-218ENST00000515752 CITED2Q99967 270 aaPredicted RBP11.3□□□□□ -0.6
SDHA-218ENST00000515752 MAP6D1Q9H9H5 199 aa11.3□□□□□ -0.6
SDHA-218ENST00000515752 KIF25-AS1Q9Y6Z4 181 aa11.3□□□□□ -0.6
SDHA-218ENST00000515752 KNCNA6PVL3 124 aa11.3□□□□□ -0.6
SDHA-218ENST00000515752 MGPP08493 103 aa11.3□□□□□ -0.6
SDHA-218ENST00000515752 G0S2P27469 103 aa11.3□□□□□ -0.6
SDHA-218ENST00000515752 HNRNPA3P51991 378 aaKnown RBP11.3□□□□□ -0.6
SDHA-218ENST00000515752 MAJINQ3KP22 176 aa11.3□□□□□ -0.6
SDHA-218ENST00000515752 RASL10AQ92737 203 aa11.3□□□□□ -0.6
SDHA-218ENST00000515752 GOLT1BQ9Y3E0 138 aa11.3□□□□□ -0.6
SDHA-218ENST00000515752 SONP18583 2426 aaKnown RBP11.29□□□□□ -0.6
SDHA-218ENST00000515752 TMEM158Q8WZ71 300 aa11.29□□□□□ -0.6
SDHA-218ENST00000515752 ZNF256Q9Y2P7 627 aaPredicted RBP11.29□□□□□ -0.6
SDHA-218ENST00000515752 MRPS16Q9Y3D3 137 aaKnown RBP11.29□□□□□ -0.6
SDHA-218ENST00000515752 A0A1W2PRX2 142 aa11.28□□□□□ -0.6
SDHA-218ENST00000515752 LINC01549A6NIU2 74 aa11.28□□□□□ -0.6
SDHA-218ENST00000515752 SNHG12Q9BXW3 62 aa11.28□□□□□ -0.6
SDHA-218ENST00000515752 LINC00315P59091 139 aa11.28□□□□□ -0.6
SDHA-218ENST00000515752 PIK3CD-AS1Q5SR53 167 aa11.28□□□□□ -0.6
SDHA-218ENST00000515752 C11orf44Q8N8P7 122 aa11.28□□□□□ -0.6
SDHA-218ENST00000515752 LINC00467Q9BRT7 94 aa11.28□□□□□ -0.6
SDHA-218ENST00000515752 MDFICQ9P1T7 246 aa11.28□□□□□ -0.6
SDHA-218ENST00000515752 NBPF19A0A087WUL8 3843 aa11.27□□□□□ -0.61
SDHA-218ENST00000515752 CBY3A6NI87 242 aa11.27□□□□□ -0.61
SDHA-218ENST00000515752 SPRY2O43597 315 aa11.27□□□□□ -0.61
SDHA-218ENST00000515752 FXYD7P58549 80 aa11.27□□□□□ -0.61
SDHA-218ENST00000515752 ITPR2Q14571 2701 aa11.27□□□□□ -0.61
SDHA-218ENST00000515752 hDV102S1A0JD36 115 aa11.26□□□□□ -0.61
SDHA-218ENST00000515752 NUDT3O95989 172 aa11.26□□□□□ -0.61
SDHA-218ENST00000515752 LY6G6DO95868 133 aa11.25□□□□□ -0.61
SDHA-218ENST00000515752 PRSS1P07477 247 aa11.25□□□□□ -0.61
SDHA-218ENST00000515752 SLC25A34Q6PIV7 304 aa11.25□□□□□ -0.61
SDHA-218ENST00000515752 LURAP1LQ8IV03 231 aa11.25□□□□□ -0.61
SDHA-218ENST00000515752 PMCHL2Q9BQD1 86 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms