RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 Q6ZSN1 163 aa7.87□□□□□ -1.15
VCAN-212ENST00000515397 NEGR1Q7Z3B1 354 aa7.87□□□□□ -1.15
VCAN-212ENST00000515397 ZNF575Q86XF7 245 aa7.87□□□□□ -1.15
VCAN-212ENST00000515397 UPK3BQ9BT76 320 aa7.87□□□□□ -1.15
VCAN-212ENST00000515397 PKHD1P08F94 4074 aa7.87□□□□□ -1.15
VCAN-212ENST00000515397 FBLL1A6NHQ2 334 aaKnown RBP7.86□□□□□ -1.15
VCAN-212ENST00000515397 SIVA1O15304 175 aa7.86□□□□□ -1.15
VCAN-212ENST00000515397 GATA1P15976 413 aaPredicted RBP7.86□□□□□ -1.15
VCAN-212ENST00000515397 SRIP30626 198 aa7.86□□□□□ -1.15
VCAN-212ENST00000515397 AKR1C3P42330 323 aa7.86□□□□□ -1.15
VCAN-212ENST00000515397 SLC25A29Q8N8R3 303 aa7.86□□□□□ -1.15
VCAN-212ENST00000515397 PCNPQ8WW12 178 aaKnown RBP7.86□□□□□ -1.15
VCAN-212ENST00000515397 FMC1Q96HJ9 113 aa7.86□□□□□ -1.15
VCAN-212ENST00000515397 ZFP30Q9Y2G7 519 aa7.86□□□□□ -1.15
VCAN-212ENST00000515397 DNAH11Q96DT5 4516 aa7.86□□□□□ -1.15
VCAN-212ENST00000515397 KRBOX1C9JBD0 128 aa7.85□□□□□ -1.15
VCAN-212ENST00000515397 H3BVH4 76 aa7.85□□□□□ -1.15
VCAN-212ENST00000515397 ARMS2P0C7Q2 107 aa7.85□□□□□ -1.15
VCAN-212ENST00000515397 ASIPP42127 132 aa7.85□□□□□ -1.15
VCAN-212ENST00000515397 EIF5AP63241 154 aaKnown RBP7.85□□□□□ -1.15
VCAN-212ENST00000515397 FAM162BQ5T6X4 162 aa7.85□□□□□ -1.15
VCAN-212ENST00000515397 DMRTA1Q5VZB9 504 aa7.85□□□□□ -1.15
VCAN-212ENST00000515397 WFDC10BQ8IUB3 73 aa7.85□□□□□ -1.15
VCAN-212ENST00000515397 TCTE3Q8IZS6 198 aa7.85□□□□□ -1.15
VCAN-212ENST00000515397 SAMD10Q9BYL1 202 aa7.85□□□□□ -1.15
VCAN-212ENST00000515397 GNG13Q9P2W3 67 aa7.85□□□□□ -1.15
VCAN-212ENST00000515397 Q9UF83 564 aa7.85□□□□□ -1.15
VCAN-212ENST00000515397 KIAA1109Q2LD37 5005 aa7.85□□□□□ -1.15
VCAN-212ENST00000515397 LTAP01374 205 aa7.84□□□□□ -1.15
VCAN-212ENST00000515397 SSTP61278 116 aa7.84□□□□□ -1.15
VCAN-212ENST00000515397 RPL19P84098 196 aaKnown RBP7.84□□□□□ -1.15
VCAN-212ENST00000515397 MUC21A0A0G2JKD1 596 aa7.83□□□□□ -1.16
VCAN-212ENST00000515397 MUC21A0A140T8X8 626 aa7.83□□□□□ -1.16
VCAN-212ENST00000515397 FUSP35637 526 aaKnown RBP eCLIP7.83□□□□□ -1.16
VCAN-212ENST00000515397 LINC00315P59091 139 aa7.83□□□□□ -1.16
VCAN-212ENST00000515397 ZNF674Q2M3X9 581 aa7.83□□□□□ -1.16
VCAN-212ENST00000515397 TTC32Q5I0X7 151 aa7.83□□□□□ -1.16
VCAN-212ENST00000515397 BAGE2Q86Y30 109 aa7.83□□□□□ -1.16
VCAN-212ENST00000515397 DERL1Q9BUN8 251 aa7.83□□□□□ -1.16
VCAN-212ENST00000515397 BOLA1Q9Y3E2 137 aa7.83□□□□□ -1.16
VCAN-212ENST00000515397 DYNC1H1Q14204 4646 aaKnown RBP7.82□□□□□ -1.16
VCAN-212ENST00000515397 A0A087WWL8 130 aa7.82□□□□□ -1.16
VCAN-212ENST00000515397 TRBV6-1A0A0K0K1D8 114 aa7.82□□□□□ -1.16
VCAN-212ENST00000515397 A0A1B0GVG6 124 aa7.82□□□□□ -1.16
VCAN-212ENST00000515397 M0R381 172 aa7.82□□□□□ -1.16
VCAN-212ENST00000515397 C1QBP02746 253 aa7.82□□□□□ -1.16
VCAN-212ENST00000515397 PRR27Q6MZM9 219 aa7.82□□□□□ -1.16
VCAN-212ENST00000515397 COX8CQ7Z4L0 72 aa7.82□□□□□ -1.16
VCAN-212ENST00000515397 AKAP14Q86UN6 197 aa7.82□□□□□ -1.16
VCAN-212ENST00000515397 C14orf178Q8N769 122 aaPredicted RBP7.82□□□□□ -1.16
VCAN-212ENST00000515397 TXNDC17Q9BRA2 123 aa7.82□□□□□ -1.16
VCAN-212ENST00000515397 PARLQ9H300 379 aa7.82□□□□□ -1.16
VCAN-212ENST00000515397 HERC2O95714 4834 aa7.81□□□□□ -1.16
VCAN-212ENST00000515397 GAGE12JA6NER3 117 aa7.81□□□□□ -1.16
VCAN-212ENST00000515397 SULT1A2P50226 295 aa7.81□□□□□ -1.16
VCAN-212ENST00000515397 GAGE1Q13065 139 aa7.81□□□□□ -1.16
VCAN-212ENST00000515397 GAGE4Q13068 117 aa7.81□□□□□ -1.16
VCAN-212ENST00000515397 GAGE5Q13069 117 aa7.81□□□□□ -1.16
VCAN-212ENST00000515397 GAGE13Q4V321 117 aa7.81□□□□□ -1.16
VCAN-212ENST00000515397 PTH2Q96A98 100 aa7.81□□□□□ -1.16
VCAN-212ENST00000515397 PRADC1Q9BSG0 188 aa7.81□□□□□ -1.16
VCAN-212ENST00000515397 IL36BQ9NZH7 164 aa7.81□□□□□ -1.16
VCAN-212ENST00000515397 TRBV6-4A0A1B0GX49 114 aa7.8□□□□□ -1.16
VCAN-212ENST00000515397 A0A1W2PPQ1 181 aa7.8□□□□□ -1.16
VCAN-212ENST00000515397 RAB19A4D1S5 217 aa7.8□□□□□ -1.16
VCAN-212ENST00000515397 RPL35P42766 123 aaKnown RBP7.8□□□□□ -1.16
VCAN-212ENST00000515397 NKX2-5P52952 324 aaPredicted RBP7.8□□□□□ -1.16
VCAN-212ENST00000515397 RHOHQ15669 191 aa7.8□□□□□ -1.16
VCAN-212ENST00000515397 LINC01559Q495D7 138 aa7.8□□□□□ -1.16
VCAN-212ENST00000515397 FAM74A4Q5TZK3 123 aa7.8□□□□□ -1.16
VCAN-212ENST00000515397 UFSP1Q6NVU6 142 aa7.8□□□□□ -1.16
VCAN-212ENST00000515397 SPATA12Q7Z6I5 190 aa7.8□□□□□ -1.16
VCAN-212ENST00000515397 SLC51BQ86UW2 128 aa7.8□□□□□ -1.16
VCAN-212ENST00000515397 C9orf62Q8N4C0 152 aa7.8□□□□□ -1.16
VCAN-212ENST00000515397 TCEAL7Q9BRU2 100 aa7.8□□□□□ -1.16
VCAN-212ENST00000515397 MLST8Q9BVC4 326 aa7.8□□□□□ -1.16
VCAN-212ENST00000515397 PHLDA3Q9Y5J5 127 aa7.8□□□□□ -1.16
VCAN-212ENST00000515397 LY96Q9Y6Y9 160 aa7.8□□□□□ -1.16
VCAN-212ENST00000515397 TRAV1-1A0A0B4J248 108 aa7.79□□□□□ -1.16
VCAN-212ENST00000515397 A8MWV9 139 aa7.79□□□□□ -1.16
VCAN-212ENST00000515397 C16orf90A8MZG2 172 aa7.79□□□□□ -1.16
VCAN-212ENST00000515397 S100A9P06702 114 aaKnown RBP7.79□□□□□ -1.16
VCAN-212ENST00000515397 MGST1P10620 155 aaKnown RBP7.79□□□□□ -1.16
VCAN-212ENST00000515397 RAB5CP51148 216 aa7.79□□□□□ -1.16
VCAN-212ENST00000515397 KRTAP10-2P60368 255 aa7.79□□□□□ -1.16
VCAN-212ENST00000515397 LCE2DQ5TA82 110 aaPredicted RBP7.79□□□□□ -1.16
VCAN-212ENST00000515397 EIF5AL1Q6IS14 154 aaKnown RBP7.79□□□□□ -1.16
VCAN-212ENST00000515397 Q6ZRN7 208 aaPredicted RBP7.79□□□□□ -1.16
VCAN-212ENST00000515397 Q8N3U1 123 aa7.79□□□□□ -1.16
VCAN-212ENST00000515397 ATP6V0E2Q8NHE4 81 aa7.79□□□□□ -1.16
VCAN-212ENST00000515397 IGHV3-30P01768 117 aa7.78□□□□□ -1.16
VCAN-212ENST00000515397 IGHV3-33P01772 117 aa7.78□□□□□ -1.16
VCAN-212ENST00000515397 CRYGDP07320 174 aa7.78□□□□□ -1.16
VCAN-212ENST00000515397 IGHV3-30-3P0DP02 117 aa7.78□□□□□ -1.16
VCAN-212ENST00000515397 IGHV3-30-5P0DP03 117 aa7.78□□□□□ -1.16
VCAN-212ENST00000515397 GZMBP10144 247 aa7.78□□□□□ -1.16
VCAN-212ENST00000515397 OR10J3Q5JRS4 329 aa7.78□□□□□ -1.16
VCAN-212ENST00000515397 DNLZQ5SXM8 178 aa7.78□□□□□ -1.16
VCAN-212ENST00000515397 SYT8Q8NBV8 401 aa7.78□□□□□ -1.16
VCAN-212ENST00000515397 OR10AG1Q8NH19 301 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms