RNA–Protein interactions for RNA: ENST00000515159.5

SLC38A9-222, Transcript of solute carrier family 38 member 9, humanhuman

TSL 2

Gene SLC38A9, Length 3,509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-222ENST00000515159 LEPROTO15243 131 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 NSUN5P1Q3KNT7 163 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 TTC32Q5I0X7 151 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 EXOC3-AS1Q8N2X6 119 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 ITLN2Q8WWU7 325 aaPredicted RBP3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 U3KQE9 123 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 DMXL2Q8TDJ6 3036 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 IGHV3-20A0A0C4DH32 117 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 RFPL3SP0C7P2 107 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 ZNF415Q09FC8 603 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 SERP2Q8N6R1 65 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 Q8NA96 180 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 PLEKHA3Q9HB20 300 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 LINC00527Q9UJ94 153 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 FREM1Q5H8C1 2179 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 PCNX2A6NKB5 2137 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 NCBP2LA6PVI3 153 aaKnown RBP3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 ATOX1O00244 68 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 RNASE4P34096 147 aaKnown RBP3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 MFAP4P55083 255 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 TMEM61Q8N0U2 210 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 GAFA1Q96PS6 74 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 S1PR3Q99500 378 aa3.31□□□□□ -1.88
SLC38A9-222ENST00000515159 ARHGAP32A7KAX9 2087 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 NACAE9PAV3 2078 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 IGLV3-9A0A075B6K5 115 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 TFF1P04155 84 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 CCL8P80075 99 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 IGFL2Q6UWQ7 119 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 MALRD1Q5VYJ5 2156 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 TRGV5A0A0B4J1U4 118 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 TRAV8-2A0A0B4J237 113 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 TRBV27A0A0K0K1C4 114 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 A0A1W2PPC4 97 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 LINC00477Q96M19 166 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 DOCK7Q96N67 2140 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 SLC50A1Q9BRV3 221 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 ICOSQ9Y6W8 199 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 ARID1AO14497 2285 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 ARID1BQ8NFD5 2236 aaPredicted RBP3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 TRBV10-3A0A0K0K1G6 114 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 LMO7DNF2Z398 122 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 UBALD1Q8TB05 177 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 CXXC4Q9H2H0 198 aa3.3□□□□□ -1.88
SLC38A9-222ENST00000515159 DOCK10Q96BY6 2186 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 CLPSL1A2RUU4 121 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 TRACP01848 142 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 MRPS36P82909 103 aaKnown RBP3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 FAM27E3Q08E93 113 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 C19orf54Q5BKX5 351 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 ADAMTSL4-AS1Q5T5F5 129 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 GOLT1AQ6ZVE7 132 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 PRR15Q8IV56 129 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 AAMDCQ9H7C9 122 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 ZNF256Q9Y2P7 627 aaPredicted RBP3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 SERP1Q9Y6X1 66 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 NDUFC2O95298 119 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 MRPS21P82921 87 aaKnown RBP3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 ORMDL2Q53FV1 153 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 C9orf153Q5TBE3 101 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 HCP5Q6MZN7 132 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 TMEM141Q96I45 108 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 WDFY4Q6ZS81 3184 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 KNTC1P50748 2209 aa3.29□□□□□ -1.88
SLC38A9-222ENST00000515159 LOC107984156A0A0G2JMH3 177 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 TINCRA0A1B0GVN0 87 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 CDX4O14627 284 aaPredicted RBP3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 SCRG1O75711 98 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 PRDX2P32119 198 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 CKS2P33552 79 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 CDSNQ15517 529 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 ARL17AQ8IVW1 177 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 BOD1L1Q8NFC6 3051 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 SPAG17Q6Q759 2223 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 LOC389332A0A1B0GUA5 103 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 ZNF815PA8K554 130 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 I3L3M4 83 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 NDUFA3O95167 84 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 GRPP07492 148 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 ERVK-16P61578 105 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 MIAQ16674 131 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 C9orf129Q5T035 196 aaKnown RBP3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 IGFL4Q6B9Z1 124 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 HRCT1Q6UXD1 115 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 MDP1Q86V88 176 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 KLHL30-AS1Q8NEE0 82 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 CACNA1GO43497 2377 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 IGHV3-43A0A0B4J1X8 118 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 IGHV3-43DP0DP04 118 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 PAPPA-AS1Q5QFB9 102 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 PRR9Q5T870 116 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 PRNTQ86SH4 94 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 SGK494Q96LW2 274 aa3.28□□□□□ -1.88
SLC38A9-222ENST00000515159 PRRC2AP48634 2157 aaKnown RBP3.28□□□□□ -1.89
SLC38A9-222ENST00000515159 NAV3Q8IVL0 2385 aa3.28□□□□□ -1.89
SLC38A9-222ENST00000515159 WDR87Q6ZQQ6 2873 aa3.28□□□□□ -1.89
SLC38A9-222ENST00000515159 TRAV12-2A0A075B6T6 113 aa3.27□□□□□ -1.89
SLC38A9-222ENST00000515159 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.27□□□□□ -1.89
SLC38A9-222ENST00000515159 IGLV5-39A0A0G2JS06 123 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms