RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 M0R3E3 92 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 SOCS3O14543 225 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 NPFFO15130 113 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 SIVA1O15304 175 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 HBDP02042 147 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 ZNF25P17030 456 aaPredicted RBP2.79□□□□□ -1.96
CAST-242ENST00000515063 PAX8Q06710 450 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 MAJINQ3KP22 176 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 KLF17Q5JT82 389 aaPredicted RBP2.79□□□□□ -1.96
CAST-242ENST00000515063 LCN12Q6JVE5 192 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 SLC25A34Q6PIV7 304 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 UNQ5815/PRO19632Q6UWF5 114 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 CD164L2Q6UWJ8 174 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 LYZL1Q6UWQ5 148 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 C12orf54Q6X4T0 127 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 FAM223AQ8IWN6 122 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 DYNAPQ8N1N2 210 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 FER1L6-AS1Q8NA97 138 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 RASL10AQ92737 203 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 LINC00477Q96M19 166 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 PRELID3AQ96N28 172 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 TMEM208Q9BTX3 173 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 PRORYQ9H606 182 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 NXT2Q9NPJ8 142 aaKnown RBP2.79□□□□□ -1.96
CAST-242ENST00000515063 GOLT1BQ9Y3E0 138 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 TLN1Q9Y490 2541 aaKnown RBP2.79□□□□□ -1.96
CAST-242ENST00000515063 BSNQ9UPA5 3926 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 CELSR3Q9NYQ7 3312 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 A0A1W2PPR1 153 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 TMEM89A2RUT3 159 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 OR2T8A6NH00 312 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 K7EMI3 77 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 OVOL1O14753 267 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 SNAI2O43623 268 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 TCF21O43680 179 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 CD5LO43866 347 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 LY6HO94772 140 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 IGHG4P01861 327 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 IGF1P05019 195 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 COX8AP10176 69 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 HLA-DRB4P13762 266 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 SAA4P35542 130 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 ZNF138P52744 262 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 CACNG7P62955 275 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 RHOGP84095 191 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 ATP5G2Q06055 141 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 C15orf32Q32M92 178 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 MRPL51Q4U2R6 128 aaKnown RBP2.78□□□□□ -1.96
CAST-242ENST00000515063 TCTEX1D4Q5JR98 221 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 SAMD13Q5VXD3 122 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 Q6ZRP5 223 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 C5orf56Q8N8D9 126 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 ZNF738Q8NE65 137 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 ITLN2Q8WWU7 325 aaPredicted RBP2.78□□□□□ -1.96
CAST-242ENST00000515063 USMG5Q96IX5 58 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 METTL26Q96S19 204 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 MAP1LC3AQ9H492 121 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 SMPXQ9UHP9 88 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 HLA-DRB4X5D2U9 266 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 ABCA1O95477 2261 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 PIEZO2Q9H5I5 2752 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 LOC400499M0QZD8 3231 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 SPENQ96T58 3664 aaKnown RBP2.78□□□□□ -1.96
CAST-242ENST00000515063 ARHGAP32A7KAX9 2087 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 ZNF462Q96JM2 2506 aa2.78□□□□□ -1.96
CAST-242ENST00000515063 CFAP47Q6ZTR5 3102 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 ABCA4P78363 2273 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 USP24Q9UPU5 2620 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 IGHV3OR16-10A0A075B7F0 116 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 IGHV4-30-2A0A087WSY4 118 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 IGKV2-40A0A087WW87 121 aaPredicted RBP2.77□□□□□ -1.97
CAST-242ENST00000515063 A0A096LNJ9 63 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 TRAV41A0A0B4J266 112 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 IGHV1-69DA0A0B4J2H0 117 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 CLPSL1A2RUU4 121 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 LINC01549A6NIU2 74 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 D6R8Y8 96 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 NDUFA4O00483 81 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 ATP5LO75964 103 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 PPP1R17O96001 155 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 IGKV2D-40P01614 121 aaPredicted RBP2.77□□□□□ -1.97
CAST-242ENST00000515063 IGHV1-69P01742 117 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 IGHG2P01859 326 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 CD24P25063 80 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 FCER1GP30273 86 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 CKS2P33552 79 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 IFI27P40305 119 aaPredicted RBP2.77□□□□□ -1.97
CAST-242ENST00000515063 ZNF80P51504 273 aaPredicted RBP2.77□□□□□ -1.97
CAST-242ENST00000515063 RIPPLY3P57055 190 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 SEC11AP67812 179 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 PRB3Q04118 309 aaPredicted RBP2.77□□□□□ -1.97
CAST-242ENST00000515063 TMEM78Q5T7P6 136 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 Q6ZVQ6 151 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 Q71RC1 249 aaPredicted RBP2.77□□□□□ -1.97
CAST-242ENST00000515063 SMIM15Q7Z3B0 74 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 APRG1Q8IVJ8 170 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 Q8N8P6 123 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 OR4X2Q8NGF9 303 aa2.77□□□□□ -1.97
CAST-242ENST00000515063 OR9G4Q8NGQ1 327 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms