RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 GNG3P63215 75 aa2.37□□□□□ -2.03
RFC1-216ENST00000514572 SELENOWP63302 87 aa2.37□□□□□ -2.03
RFC1-216ENST00000514572 KRTAP6-3Q3LI67 103 aa2.37□□□□□ -2.03
RFC1-216ENST00000514572 SBSPONQ8IVN8 264 aa2.37□□□□□ -2.03
RFC1-216ENST00000514572 OR8J3Q8NGG0 315 aa2.37□□□□□ -2.03
RFC1-216ENST00000514572 IMMP2LQ96T52 175 aa2.37□□□□□ -2.03
RFC1-216ENST00000514572 COMMD5Q9GZQ3 224 aa2.37□□□□□ -2.03
RFC1-216ENST00000514572 C11orf68Q9H3H3 251 aaKnown RBP2.37□□□□□ -2.03
RFC1-216ENST00000514572 FAM32AQ9Y421 112 aaKnown RBP2.37□□□□□ -2.03
RFC1-216ENST00000514572 PCLOQ9Y6V0 5065 aa2.37□□□□□ -2.03
RFC1-216ENST00000514572 HECTD4Q9Y4D8 3996 aa2.37□□□□□ -2.03
RFC1-216ENST00000514572 DMBT1Q9UGM3 2413 aaPredicted RBP2.37□□□□□ -2.03
RFC1-216ENST00000514572 FUOMA2VDF0 154 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 OOSP1A8MZH6 123 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 LGALS1P09382 135 aaKnown RBP2.36□□□□□ -2.03
RFC1-216ENST00000514572 PIPP12273 146 aaPredicted RBP2.36□□□□□ -2.03
RFC1-216ENST00000514572 CCL3L1P16619 93 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 HLA-DMBP28068 263 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 RPL28P46779 137 aaKnown RBP2.36□□□□□ -2.03
RFC1-216ENST00000514572 EDDM3BP56851 147 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 SMIM11AP58511 58 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 DEFA1P59665 94 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 KRTAP10-1P60331 282 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 IBA57Q5T440 356 aaKnown RBP2.36□□□□□ -2.03
RFC1-216ENST00000514572 RPL13AP3Q6NVV1 102 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 PP632Q6XCG6 107 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 GDPD1Q8N9F7 314 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 OR5A2Q8NGI9 324 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 SLAMF6Q96DU3 332 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 BTF3L4Q96K17 158 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 DNAJC30Q96LL9 226 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 ZNF714Q96N38 554 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 DERL1Q9BUN8 251 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 TMEM133Q9H2Q1 129 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 GID8Q9NWU2 228 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 HHLA3Q9XRX5 114 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 LINC00312Q9Y6C7 94 aa2.36□□□□□ -2.03
RFC1-216ENST00000514572 TRGV10A0A0A0MS01 117 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 ARRDC5A6NEK1 342 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 BBIP1A8MTZ0 92 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 G6PCP35575 357 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 RAB14P61106 215 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 MEF2BQ02080 365 aaPredicted RBP2.35□□□□□ -2.03
RFC1-216ENST00000514572 HES1Q14469 280 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 HACD4Q5VWC8 232 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 HAGHLQ6PII5 290 aaPredicted RBP2.35□□□□□ -2.03
RFC1-216ENST00000514572 C10orf99Q6UWK7 81 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 LYZL1Q6UWQ5 148 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 ARPINQ7Z6K5 226 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 SLC35E3Q7Z769 313 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 TRAPPC6BQ86SZ2 158 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 Q8IYB0 196 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 C4orf3Q8WVX3 66 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 AQP3Q92482 292 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 TOMM6Q96B49 74 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 ARMC1Q9NVT9 282 aa2.35□□□□□ -2.03
RFC1-216ENST00000514572 SAMHD1Q9Y3Z3 626 aaKnown RBP2.35□□□□□ -2.03
RFC1-216ENST00000514572 AMMECR1Q9Y4X0 333 aaPredicted RBP2.35□□□□□ -2.03
RFC1-216ENST00000514572 HUWE1Q7Z6Z7 4374 aaKnown RBP2.35□□□□□ -2.03
RFC1-216ENST00000514572 HERC2O95714 4834 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 PLECQ15149 4684 aaKnown RBP2.34□□□□□ -2.03
RFC1-216ENST00000514572 IGHV3-64A0A075B6Q5 118 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 TRAV7A0A075B6U4 112 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 RIIAD1A6NNX1 92 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 TMEM238C9JI98 176 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 BUB1B-PAK6H3BSN5 160 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 H3BT86 120 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 OVOL1O14753 267 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 SULT1B1O43704 296 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 IFNGP01579 166 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 IGHV3-7P01780 117 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 TFF1P04155 84 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 HIST1H2BOP23527 126 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 PSMB8P28062 276 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 ERP29P30040 261 aaKnown RBP2.34□□□□□ -2.03
RFC1-216ENST00000514572 HIST1H2BBP33778 126 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 RPS27P42677 84 aaKnown RBP2.34□□□□□ -2.03
RFC1-216ENST00000514572 FXYD6P3P58550 94 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 HIST1H2BDP58876 126 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 CDC42P60953 191 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 HIST1H2BCP62807 126 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 ZNF90Q03938 601 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 HIST2H2BEQ16778 126 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 DEFB136Q30KP8 78 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.34□□□□□ -2.03
RFC1-216ENST00000514572 AADACL3Q5VUY0 350 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 HEPN1Q6WQI6 88 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 LINC00471Q8N535 108 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 OR51T1Q8NGJ9 327 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 MCFD2Q8NI22 146 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 AP3S1Q92572 193 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 HIST1H2BHQ93079 126 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 HIST1H2BNQ99877 126 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 HIST1H2BMQ99879 126 aa2.34□□□□□ -2.03
RFC1-216ENST00000514572 FABP5P3A8MUU1 101 aa2.33□□□□□ -2.04
RFC1-216ENST00000514572 FXYD1O00168 92 aa2.33□□□□□ -2.04
RFC1-216ENST00000514572 ZNF737O75373 536 aa2.33□□□□□ -2.04
RFC1-216ENST00000514572 GADD45GO95257 159 aa2.33□□□□□ -2.04
RFC1-216ENST00000514572 CRYZL1O95825 349 aa2.33□□□□□ -2.04
RFC1-216ENST00000514572 LY6G6CO95867 125 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms