RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 RPL11P62913 178 aaKnown RBP11.27□□□□□ -0.6
DDR1-271ENST00000513240 PRR25Q96S07 402 aa11.27□□□□□ -0.6
DDR1-271ENST00000513240 RNF5Q99942 180 aa11.27□□□□□ -0.6
DDR1-271ENST00000513240 TRAV40A0A0B4J280 105 aa11.27□□□□□ -0.61
DDR1-271ENST00000513240 LOC107984156A0A0G2JMH3 177 aa11.27□□□□□ -0.61
DDR1-271ENST00000513240 NPYP01303 97 aa11.27□□□□□ -0.61
DDR1-271ENST00000513240 ARL17AQ8IVW1 177 aa11.27□□□□□ -0.61
DDR1-271ENST00000513240 FOXC2Q99958 501 aa11.27□□□□□ -0.61
DDR1-271ENST00000513240 TMEM160Q9NX00 188 aa11.27□□□□□ -0.61
DDR1-271ENST00000513240 NF1P21359 2839 aa11.27□□□□□ -0.61
DDR1-271ENST00000513240 NAV2Q8IVL1 2488 aa11.27□□□□□ -0.61
DDR1-271ENST00000513240 IGKCP01834 107 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 HIST2H2BDQ6DRA6 164 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 DOPEY1Q5JWR5 2465 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 TRAV26-2A0A0B4J265 109 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 CENPVL3A0A0U1RRI6 287 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 EDN2P20800 178 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 MORN3Q6PF18 240 aaPredicted RBP11.26□□□□□ -0.61
DDR1-271ENST00000513240 ORMDL3Q8N138 153 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 C3orf56Q8N813 242 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 CCDC140Q96MF4 163 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 TEX15Q9BXT5 2789 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 WNK1Q9H4A3 2382 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 GAGE12JA6NER3 117 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 GAGE7O76087 117 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 GAGE12FP0CL80 117 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 GAGE12GP0CL81 117 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 GAGE12IP0CL82 117 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 IGHV4-38-2P0DP08 117 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 GAGE4Q13068 117 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 ZFP2Q6ZN57 461 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 Q8N6K4 173 aa11.26□□□□□ -0.61
DDR1-271ENST00000513240 ITLN2Q8WWU7 325 aaPredicted RBP11.26□□□□□ -0.61
DDR1-271ENST00000513240 IGHV4-39P01824 125 aa11.25□□□□□ -0.61
DDR1-271ENST00000513240 PAX8Q06710 450 aa11.25□□□□□ -0.61
DDR1-271ENST00000513240 ATP6V0E2Q8NHE4 81 aa11.25□□□□□ -0.61
DDR1-271ENST00000513240 ANKRD17O75179 2603 aaKnown RBP11.25□□□□□ -0.61
DDR1-271ENST00000513240 IGHV4-61A0A0C4DH41 118 aa11.25□□□□□ -0.61
DDR1-271ENST00000513240 MRPL51Q4U2R6 128 aaKnown RBP11.25□□□□□ -0.61
DDR1-271ENST00000513240 TMEM8BA6NDV4 472 aa11.24□□□□□ -0.61
DDR1-271ENST00000513240 FABP5P3A8MUU1 101 aa11.24□□□□□ -0.61
DDR1-271ENST00000513240 H3BVH4 76 aa11.24□□□□□ -0.61
DDR1-271ENST00000513240 RPL7P18124 248 aaKnown RBP11.24□□□□□ -0.61
DDR1-271ENST00000513240 PPDPFLQ8WWR9 84 aa11.24□□□□□ -0.61
DDR1-271ENST00000513240 DLX4Q92988 240 aaPredicted RBP11.24□□□□□ -0.61
DDR1-271ENST00000513240 C11orf21Q9P2W6 132 aa11.24□□□□□ -0.61
DDR1-271ENST00000513240 CKS2P33552 79 aa11.24□□□□□ -0.61
DDR1-271ENST00000513240 EFNA4P52798 201 aa11.24□□□□□ -0.61
DDR1-271ENST00000513240 BLCAPP62952 87 aa11.24□□□□□ -0.61
DDR1-271ENST00000513240 ZNF575Q86XF7 245 aa11.24□□□□□ -0.61
DDR1-271ENST00000513240 NIPBLQ6KC79 2804 aaeCLIP11.23□□□□□ -0.61
DDR1-271ENST00000513240 F6UB75 175 aa11.23□□□□□ -0.61
DDR1-271ENST00000513240 NPFFO15130 113 aa11.23□□□□□ -0.61
DDR1-271ENST00000513240 LEPP41159 167 aa11.23□□□□□ -0.61
DDR1-271ENST00000513240 NDUFV3P56181 108 aaKnown RBP11.23□□□□□ -0.61
DDR1-271ENST00000513240 UNQ9165/PRO28630Q6UXU0 137 aa11.23□□□□□ -0.61
DDR1-271ENST00000513240 DTX2Q86UW9 622 aa11.23□□□□□ -0.61
DDR1-271ENST00000513240 KLK15Q9H2R5 256 aa11.23□□□□□ -0.61
DDR1-271ENST00000513240 FAM104BQ5XKR9 115 aa11.23□□□□□ -0.61
DDR1-271ENST00000513240 UCNP55089 124 aa11.22□□□□□ -0.61
DDR1-271ENST00000513240 YAE1D1Q9NRH1 226 aa11.22□□□□□ -0.61
DDR1-271ENST00000513240 CLPSL1A2RUU4 121 aa11.22□□□□□ -0.61
DDR1-271ENST00000513240 LINC01549A6NIU2 74 aa11.22□□□□□ -0.61
DDR1-271ENST00000513240 TRGV3P03979 118 aa11.22□□□□□ -0.61
DDR1-271ENST00000513240 UBE2E1P51965 193 aa11.22□□□□□ -0.61
DDR1-271ENST00000513240 FAM159AQ6UWV7 190 aa11.22□□□□□ -0.61
DDR1-271ENST00000513240 CITED1Q99966 193 aa11.22□□□□□ -0.61
DDR1-271ENST00000513240 AGPAT4-IT1Q9H0P7 198 aa11.22□□□□□ -0.61
DDR1-271ENST00000513240 PPDPFQ9H3Y8 114 aa11.22□□□□□ -0.61
DDR1-271ENST00000513240 TRAV4A0A0B4J268 109 aa11.21□□□□□ -0.61
DDR1-271ENST00000513240 HOXA3O43365 443 aaPredicted RBP11.21□□□□□ -0.61
DDR1-271ENST00000513240 BUB3O43684 328 aa11.21□□□□□ -0.61
DDR1-271ENST00000513240 CRLF1O75462 422 aa11.21□□□□□ -0.61
DDR1-271ENST00000513240 DPM2O94777 84 aa11.21□□□□□ -0.61
DDR1-271ENST00000513240 ZNF688P0C7X2 276 aa11.21□□□□□ -0.61
DDR1-271ENST00000513240 TEN1Q86WV5 123 aa11.21□□□□□ -0.61
DDR1-271ENST00000513240 PIFOQ8TCI5 191 aa11.21□□□□□ -0.61
DDR1-271ENST00000513240 ZMAT4Q9H898 229 aa11.21□□□□□ -0.61
DDR1-271ENST00000513240 A0A087WX48 190 aa11.21□□□□□ -0.62
DDR1-271ENST00000513240 PRB1P04280 392 aa11.21□□□□□ -0.62
DDR1-271ENST00000513240 SRSF1Q07955 248 aaKnown RBP eCLIP11.21□□□□□ -0.62
DDR1-271ENST00000513240 GAGE2BQ13066 116 aa11.21□□□□□ -0.62
DDR1-271ENST00000513240 GAGE2EQ4V326 116 aa11.21□□□□□ -0.62
DDR1-271ENST00000513240 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.21□□□□□ -0.62
DDR1-271ENST00000513240 MRPL35Q9NZE8 188 aaKnown RBP11.21□□□□□ -0.62
DDR1-271ENST00000513240 GAGE2DQ9UEU5 116 aa11.21□□□□□ -0.62
DDR1-271ENST00000513240 TRBV7-3A0A075B6L6 115 aa11.2□□□□□ -0.62
DDR1-271ENST00000513240 ATP5J2P56134 94 aa11.2□□□□□ -0.62
DDR1-271ENST00000513240 C10orf99Q6UWK7 81 aa11.2□□□□□ -0.62
DDR1-271ENST00000513240 ZFAND3Q9H8U3 227 aa11.2□□□□□ -0.62
DDR1-271ENST00000513240 ZNF469Q96JG9 3925 aaPredicted RBP11.19□□□□□ -0.62
DDR1-271ENST00000513240 RHODO00212 210 aa11.19□□□□□ -0.62
DDR1-271ENST00000513240 U3KQK5 164 aa11.19□□□□□ -0.62
DDR1-271ENST00000513240 NBPF19A0A087WUL8 3843 aa11.19□□□□□ -0.62
DDR1-271ENST00000513240 TTC32Q5I0X7 151 aa11.19□□□□□ -0.62
DDR1-271ENST00000513240 MINOS1Q5TGZ0 78 aa11.19□□□□□ -0.62
DDR1-271ENST00000513240 ANKRD29Q8N6D5 301 aa11.19□□□□□ -0.62
DDR1-271ENST00000513240 GATD1Q8NB37 220 aa11.19□□□□□ -0.62
DDR1-271ENST00000513240 TMEM158Q8WZ71 300 aa11.19□□□□□ -0.62
DDR1-271ENST00000513240 MINOS1-NBL1R4GNA1 71 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms