RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 CIDEAO60543 219 aa11.08□□□□□ -0.64
PDLIM5-216ENST00000511767 SH2D1AO60880 128 aa11.08□□□□□ -0.64
PDLIM5-216ENST00000511767 GYPEP15421 78 aa11.08□□□□□ -0.64
PDLIM5-216ENST00000511767 GATA1P15976 413 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-216ENST00000511767 AKR1C3P42330 323 aa11.08□□□□□ -0.64
PDLIM5-216ENST00000511767 NEGR1Q7Z3B1 354 aa11.08□□□□□ -0.64
PDLIM5-216ENST00000511767 MLST8Q9BVC4 326 aa11.08□□□□□ -0.64
PDLIM5-216ENST00000511767 hCG_2014768A0A024R1R8 64 aa11.07□□□□□ -0.64
PDLIM5-216ENST00000511767 SOHLH1Q5JUK2 328 aa11.07□□□□□ -0.64
PDLIM5-216ENST00000511767 ZNF506Q5JVG8 444 aa11.07□□□□□ -0.64
PDLIM5-216ENST00000511767 FAM162BQ5T6X4 162 aa11.07□□□□□ -0.64
PDLIM5-216ENST00000511767 AKAP14Q86UN6 197 aa11.07□□□□□ -0.64
PDLIM5-216ENST00000511767 IL36BQ9NZH7 164 aa11.07□□□□□ -0.64
PDLIM5-216ENST00000511767 HECTD4Q9Y4D8 3996 aa11.07□□□□□ -0.64
PDLIM5-216ENST00000511767 DYNC1H1Q14204 4646 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-216ENST00000511767 SCO2A0A1W2PP80 73 aa11.06□□□□□ -0.64
PDLIM5-216ENST00000511767 B4DEV8 164 aa11.06□□□□□ -0.64
PDLIM5-216ENST00000511767 PIK3CD-AS1Q5SR53 167 aa11.06□□□□□ -0.64
PDLIM5-216ENST00000511767 BAGE2Q86Y30 109 aa11.06□□□□□ -0.64
PDLIM5-216ENST00000511767 C6orf223Q8N319 242 aa11.06□□□□□ -0.64
PDLIM5-216ENST00000511767 C9orf62Q8N4C0 152 aa11.06□□□□□ -0.64
PDLIM5-216ENST00000511767 KRTAP1-5Q9BYS1 174 aa11.06□□□□□ -0.64
PDLIM5-216ENST00000511767 DNAH11Q96DT5 4516 aa11.06□□□□□ -0.64
PDLIM5-216ENST00000511767 LOC100131303A0A0U1RQF7 123 aa11.05□□□□□ -0.64
PDLIM5-216ENST00000511767 GRIFINA4D1Z8 144 aa11.05□□□□□ -0.64
PDLIM5-216ENST00000511767 M0R036 132 aa11.05□□□□□ -0.64
PDLIM5-216ENST00000511767 ARMS2P0C7Q2 107 aa11.05□□□□□ -0.64
PDLIM5-216ENST00000511767 S100A4P26447 101 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-216ENST00000511767 ASIPP42127 132 aa11.05□□□□□ -0.64
PDLIM5-216ENST00000511767 DMRTA1Q5VZB9 504 aa11.05□□□□□ -0.64
PDLIM5-216ENST00000511767 SLC25A29Q8N8R3 303 aa11.05□□□□□ -0.64
PDLIM5-216ENST00000511767 GNG13Q9P2W3 67 aa11.05□□□□□ -0.64
PDLIM5-216ENST00000511767 IGHV3-73A0A0B4J1V6 119 aa11.04□□□□□ -0.64
PDLIM5-216ENST00000511767 A0A1W2PPQ1 181 aa11.04□□□□□ -0.64
PDLIM5-216ENST00000511767 NXPH4O95158 308 aa11.04□□□□□ -0.64
PDLIM5-216ENST00000511767 SRIP30626 198 aa11.04□□□□□ -0.64
PDLIM5-216ENST00000511767 LINC01559Q495D7 138 aa11.04□□□□□ -0.64
PDLIM5-216ENST00000511767 Q6ZSN1 163 aa11.04□□□□□ -0.64
PDLIM5-216ENST00000511767 NHLRC2Q8NBF2 726 aa11.04□□□□□ -0.64
PDLIM5-216ENST00000511767 SCRT2Q9NQ03 307 aa11.04□□□□□ -0.64
PDLIM5-216ENST00000511767 MANBALQ9NQG1 85 aa11.04□□□□□ -0.64
PDLIM5-216ENST00000511767 A0A1B0GVG6 124 aa11.03□□□□□ -0.64
PDLIM5-216ENST00000511767 TRBV6-4A0A1B0GX49 114 aa11.03□□□□□ -0.64
PDLIM5-216ENST00000511767 TEX46H3BTG2 121 aa11.03□□□□□ -0.64
PDLIM5-216ENST00000511767 SIVA1O15304 175 aa11.03□□□□□ -0.64
PDLIM5-216ENST00000511767 C11orf52Q96A22 123 aa11.03□□□□□ -0.64
PDLIM5-216ENST00000511767 TXNDC17Q9BRA2 123 aa11.03□□□□□ -0.64
PDLIM5-216ENST00000511767 JPT2Q9H910 190 aa11.03□□□□□ -0.64
PDLIM5-216ENST00000511767 TMSB15BA0A087X1C1 80 aa11.02□□□□□ -0.65
PDLIM5-216ENST00000511767 A8MWV9 139 aa11.02□□□□□ -0.65
PDLIM5-216ENST00000511767 RPL35P42766 123 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-216ENST00000511767 TNP2Q05952 138 aa11.02□□□□□ -0.65
PDLIM5-216ENST00000511767 ZFP2Q6ZN57 461 aa11.02□□□□□ -0.65
PDLIM5-216ENST00000511767 PCNPQ8WW12 178 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-216ENST00000511767 SAMD10Q9BYL1 202 aa11.02□□□□□ -0.65
PDLIM5-216ENST00000511767 PARLQ9H300 379 aa11.02□□□□□ -0.65
PDLIM5-216ENST00000511767 H3BVH4 76 aa11.01□□□□□ -0.65
PDLIM5-216ENST00000511767 BTF3P20290 206 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-216ENST00000511767 TTC32Q5I0X7 151 aa11.01□□□□□ -0.65
PDLIM5-216ENST00000511767 UFSP1Q6NVU6 142 aa11.01□□□□□ -0.65
PDLIM5-216ENST00000511767 SH2D6Q7Z4S9 175 aa11.01□□□□□ -0.65
PDLIM5-216ENST00000511767 DERL1Q9BUN8 251 aa11.01□□□□□ -0.65
PDLIM5-216ENST00000511767 TIRAPP58753 221 aa11□□□□□ -0.65
PDLIM5-216ENST00000511767 PRADC1Q9BSG0 188 aa11□□□□□ -0.65
PDLIM5-216ENST00000511767 RAB19A4D1S5 217 aa10.99□□□□□ -0.65
PDLIM5-216ENST00000511767 IGLV2-8P01709 118 aa10.99□□□□□ -0.65
PDLIM5-216ENST00000511767 MGST1P10620 155 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-216ENST00000511767 SFRP2Q96HF1 295 aa10.99□□□□□ -0.65
PDLIM5-216ENST00000511767 SSBP4Q9BWG4 385 aaPredicted RBP10.99□□□□□ -0.65
PDLIM5-216ENST00000511767 Q9UF83 564 aa10.99□□□□□ -0.65
PDLIM5-216ENST00000511767 PHLDA3Q9Y5J5 127 aa10.99□□□□□ -0.65
PDLIM5-216ENST00000511767 KIAA1109Q2LD37 5005 aa10.98□□□□□ -0.65
PDLIM5-216ENST00000511767 CRYGDP07320 174 aa10.98□□□□□ -0.65
PDLIM5-216ENST00000511767 RPL19P84098 196 aaKnown RBP10.98□□□□□ -0.65
PDLIM5-216ENST00000511767 MEF2BQ02080 365 aaPredicted RBP10.98□□□□□ -0.65
PDLIM5-216ENST00000511767 RHOHQ15669 191 aa10.98□□□□□ -0.65
PDLIM5-216ENST00000511767 SYT8Q8NBV8 401 aa10.98□□□□□ -0.65
PDLIM5-216ENST00000511767 PKHD1P08F94 4074 aa10.98□□□□□ -0.65
PDLIM5-216ENST00000511767 HERC2O95714 4834 aa10.97□□□□□ -0.65
PDLIM5-216ENST00000511767 CXCL1P09341 107 aa10.97□□□□□ -0.65
PDLIM5-216ENST00000511767 MED9Q9NWA0 146 aa10.97□□□□□ -0.65
PDLIM5-216ENST00000511767 VAX2Q9UIW0 290 aa10.97□□□□□ -0.65
PDLIM5-216ENST00000511767 BOLA1Q9Y3E2 137 aa10.97□□□□□ -0.65
PDLIM5-216ENST00000511767 TNFRSF18Q9Y5U5 241 aa10.97□□□□□ -0.65
PDLIM5-216ENST00000511767 PDE6DO43924 150 aa10.96□□□□□ -0.65
PDLIM5-216ENST00000511767 DNAH10OSP0CZ25 163 aa10.96□□□□□ -0.65
PDLIM5-216ENST00000511767 MED14OSP0DP75 135 aa10.96□□□□□ -0.65
PDLIM5-216ENST00000511767 BCL2P10415 239 aa10.96□□□□□ -0.65
PDLIM5-216ENST00000511767 WFDC10BQ8IUB3 73 aa10.96□□□□□ -0.65
PDLIM5-216ENST00000511767 C14orf178Q8N769 122 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-216ENST00000511767 TRAV9-2A0A087WT02 112 aa10.95□□□□□ -0.66
PDLIM5-216ENST00000511767 M0R381 172 aa10.95□□□□□ -0.66
PDLIM5-216ENST00000511767 IFNA1P01562 189 aa10.95□□□□□ -0.66
PDLIM5-216ENST00000511767 NKX2-5P52952 324 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-216ENST00000511767 LINC00315P59091 139 aa10.95□□□□□ -0.66
PDLIM5-216ENST00000511767 BLOC1S1P78537 153 aa10.95□□□□□ -0.66
PDLIM5-216ENST00000511767 CENPWQ5EE01 88 aa10.95□□□□□ -0.66
PDLIM5-216ENST00000511767 PRR27Q6MZM9 219 aa10.95□□□□□ -0.66
PDLIM5-216ENST00000511767 ALKAL2Q6UX46 152 aa10.95□□□□□ -0.66
PDLIM5-216ENST00000511767 Q6ZRN7 208 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms