RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 TSPAN19P0C672 248 aa0.43□□□□□ -2.34
CHD1-207ENST00000511628 MPC1LP0DKB6 136 aa0.43□□□□□ -2.34
CHD1-207ENST00000511628 ZNF137PP52743 207 aa0.43□□□□□ -2.34
CHD1-207ENST00000511628 KLKP1Q107X0 134 aa0.43□□□□□ -2.34
CHD1-207ENST00000511628 IQCJQ1A5X6 159 aa0.43□□□□□ -2.34
CHD1-207ENST00000511628 CLLU1Q5K131 121 aa0.43□□□□□ -2.34
CHD1-207ENST00000511628 SCIMPQ6UWF3 145 aa0.43□□□□□ -2.34
CHD1-207ENST00000511628 CTAGE3PQ8IX95 158 aa0.43□□□□□ -2.34
CHD1-207ENST00000511628 C5orf56Q8N8D9 126 aa0.43□□□□□ -2.34
CHD1-207ENST00000511628 PFDN5Q99471 154 aa0.43□□□□□ -2.34
CHD1-207ENST00000511628 BET1LQ9NYM9 111 aa0.43□□□□□ -2.34
CHD1-207ENST00000511628 PTPRGP23470 1445 aa0.43□□□□□ -2.34
CHD1-207ENST00000511628 KDM5CP41229 1560 aa0.43□□□□□ -2.34
CHD1-207ENST00000511628 ARHGEF10O15013 1369 aa0.43□□□□□ -2.34
CHD1-207ENST00000511628 KIDINS220Q9ULH0 1771 aa0.42□□□□□ -2.34
CHD1-207ENST00000511628 LRP5O75197 1615 aa0.42□□□□□ -2.34
CHD1-207ENST00000511628 CCDC171Q6TFL3 1326 aa0.42□□□□□ -2.34
CHD1-207ENST00000511628 BCORL1Q5H9F3 1711 aa0.42□□□□□ -2.34
CHD1-207ENST00000511628 FHAD1B1AJZ9 1412 aa0.42□□□□□ -2.34
CHD1-207ENST00000511628 ARHGAP31Q2M1Z3 1444 aa0.42□□□□□ -2.34
CHD1-207ENST00000511628 ABCA4P78363 2273 aa0.42□□□□□ -2.34
CHD1-207ENST00000511628 TRAV12-2A0A075B6T6 113 aa0.42□□□□□ -2.34
CHD1-207ENST00000511628 ARPC5O15511 151 aa0.42□□□□□ -2.34
CHD1-207ENST00000511628 COX4I1P13073 169 aa0.42□□□□□ -2.34
CHD1-207ENST00000511628 HIST1H1AQ02539 215 aaPredicted RBP0.42□□□□□ -2.34
CHD1-207ENST00000511628 ZNF56Q15929 161 aa0.42□□□□□ -2.34
CHD1-207ENST00000511628 SNX29P2Q8IUI4 249 aa0.42□□□□□ -2.34
CHD1-207ENST00000511628 TCEAL4Q96EI5 215 aa0.42□□□□□ -2.34
CHD1-207ENST00000511628 FAM103A1Q9BTL3 118 aaKnown RBP0.42□□□□□ -2.34
CHD1-207ENST00000511628 MYO7AQ13402 2215 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 AFDNP55196 1824 aaKnown RBP0.41□□□□□ -2.34
CHD1-207ENST00000511628 TRAV17A0A0B4J275 112 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 CXorf51AA0A1B0GTR3 108 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 LOC105371267A0A1B0GV96 52 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 RBAKDNA6NC62 111 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 FXYD1O00168 92 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 PRH1P02810 166 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 TFF1P04155 84 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 KRTAP2-3P0C7H8 128 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 IGLC6P0CF74 106 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 S100A12P80511 92 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 SMIM21Q3B7S5 101 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 LINC01545Q5VT33 79 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 TMEM141Q96I45 108 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 KRTAP2-4Q9BYR9 128 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 KRTAP2-1Q9BYU5 128 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 SMIM3Q9BZL3 60 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 TMEM14BQ9NUH8 114 aa0.41□□□□□ -2.34
CHD1-207ENST00000511628 ESPL1Q14674 2120 aa0.4□□□□□ -2.35
CHD1-207ENST00000511628 A6NIN4 97 aa0.4□□□□□ -2.35
CHD1-207ENST00000511628 K7ERU9 68 aa0.4□□□□□ -2.35
CHD1-207ENST00000511628 GUCA1AP43080 201 aaPredicted RBP0.4□□□□□ -2.35
CHD1-207ENST00000511628 SPINK7P58062 85 aa0.4□□□□□ -2.35
CHD1-207ENST00000511628 RRAS2P62070 204 aaPredicted RBP0.4□□□□□ -2.35
CHD1-207ENST00000511628 SPCS2Q15005 226 aa0.4□□□□□ -2.35
CHD1-207ENST00000511628 SPANXN1Q5VSR9 72 aa0.4□□□□□ -2.35
CHD1-207ENST00000511628 VSTM2AQ8TAG5 236 aa0.4□□□□□ -2.35
CHD1-207ENST00000511628 DSCR8Q96T75 97 aa0.4□□□□□ -2.35
CHD1-207ENST00000511628 PSMG3Q9BT73 122 aaPredicted RBP0.4□□□□□ -2.35
CHD1-207ENST00000511628 LSM2Q9Y333 95 aaKnown RBP0.4□□□□□ -2.35
CHD1-207ENST00000511628 CPDO75976 1380 aa0.4□□□□□ -2.35
CHD1-207ENST00000511628 ZCCHC6Q5VYS8 1495 aaKnown RBP0.4□□□□□ -2.35
CHD1-207ENST00000511628 CDK5RAP2Q96SN8 1893 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 MUC5ACP98088 5654 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 PIGBOS1A0A0B4J2F0 54 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 TCRBV3S1A0A5B6 114 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 ZNF670-ZNF695F2Z2N8 137 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 LINC00694P0DN24 101 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 PYYP10082 97 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 SLC25A6P12236 298 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 PIPP12273 146 aaPredicted RBP0.39□□□□□ -2.35
CHD1-207ENST00000511628 COPZ1P61923 177 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 RPL37P61927 97 aaKnown RBP0.39□□□□□ -2.35
CHD1-207ENST00000511628 SSBP1Q04837 148 aaKnown RBP0.39□□□□□ -2.35
CHD1-207ENST00000511628 KRTAP21-1Q3LI58 79 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 CCDC58Q4VC31 144 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 FAM74A4Q5TZK3 123 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 OR2T2Q6IF00 324 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 CYP2G1PQ6ZSU1 146 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 TSTD1Q8NFU3 115 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 COPS9Q8WXC6 57 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 CCDC167Q9P0B6 97 aa0.39□□□□□ -2.35
CHD1-207ENST00000511628 BLMP54132 1417 aaPredicted RBP0.38□□□□□ -2.35
CHD1-207ENST00000511628 CACNA1EQ15878 2313 aa0.38□□□□□ -2.35
CHD1-207ENST00000511628 ABCA1O95477 2261 aa0.38□□□□□ -2.35
CHD1-207ENST00000511628 RREB1Q92766 1687 aa0.38□□□□□ -2.35
CHD1-207ENST00000511628 SYNJ1O43426 1573 aa0.38□□□□□ -2.35
CHD1-207ENST00000511628 A0A096LNT2 108 aa0.38□□□□□ -2.35
CHD1-207ENST00000511628 NPFFO15130 113 aa0.38□□□□□ -2.35
CHD1-207ENST00000511628 IFNA17P01571 189 aa0.38□□□□□ -2.35
CHD1-207ENST00000511628 ARPC4P59998 168 aa0.38□□□□□ -2.35
CHD1-207ENST00000511628 SELENOWP63302 87 aa0.38□□□□□ -2.35
CHD1-207ENST00000511628 RPL7L1Q6DKI1 246 aaKnown RBP0.38□□□□□ -2.35
CHD1-207ENST00000511628 C4orf33Q8N1A6 199 aa0.38□□□□□ -2.35
CHD1-207ENST00000511628 KCNRGQ8N5I3 272 aa0.38□□□□□ -2.35
CHD1-207ENST00000511628 TMEM191AQ9H0A3 160 aa0.38□□□□□ -2.35
CHD1-207ENST00000511628 TPT1P8Q9HAU6 139 aa0.38□□□□□ -2.35
CHD1-207ENST00000511628 MYH13Q9UKX3 1938 aa0.38□□□□□ -2.35
CHD1-207ENST00000511628 VIRMAQ69YN4 1812 aaKnown RBP0.38□□□□□ -2.35
CHD1-207ENST00000511628 FRAS1Q86XX4 4008 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms