RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SMIM21Q3B7S5 101 aa0.41□□□□□ -2.34
TRAPPC11-207ENST00000511409 GLYATL3Q5SZD4 288 aa0.41□□□□□ -2.34
TRAPPC11-207ENST00000511409 RPL7L1Q6DKI1 246 aaKnown RBP0.41□□□□□ -2.34
TRAPPC11-207ENST00000511409 C10orf99Q6UWK7 81 aa0.41□□□□□ -2.34
TRAPPC11-207ENST00000511409 TSKUQ8WUA8 353 aa0.41□□□□□ -2.34
TRAPPC11-207ENST00000511409 TMEM141Q96I45 108 aa0.41□□□□□ -2.34
TRAPPC11-207ENST00000511409 SMR3AQ99954 134 aa0.41□□□□□ -2.34
TRAPPC11-207ENST00000511409 BET1LQ9NYM9 111 aa0.41□□□□□ -2.34
TRAPPC11-207ENST00000511409 ERG28Q9UKR5 140 aa0.41□□□□□ -2.34
TRAPPC11-207ENST00000511409 PAIP2BQ9ULR5 123 aaKnown RBP0.41□□□□□ -2.34
TRAPPC11-207ENST00000511409 KCPQ6ZWJ8 1503 aa0.41□□□□□ -2.34
TRAPPC11-207ENST00000511409 NAV3Q8IVL0 2385 aa0.41□□□□□ -2.34
TRAPPC11-207ENST00000511409 CTTNBP2Q8WZ74 1663 aa0.4□□□□□ -2.34
TRAPPC11-207ENST00000511409 SOGA1O94964 1423 aa0.4□□□□□ -2.34
TRAPPC11-207ENST00000511409 TRPM7Q96QT4 1865 aa0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 KNTC1P50748 2209 aa0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 CXorf51AA0A1B0GTR3 108 aa0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 TFF1P04155 84 aa0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 TSPAN19P0C672 248 aa0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 PYYP10082 97 aa0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 GUCA1AP43080 201 aaPredicted RBP0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 COPZ1P61923 177 aa0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 RRAS2P62070 204 aaPredicted RBP0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 KLKP1Q107X0 134 aa0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 SPCS2Q15005 226 aa0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 DEFB132Q7Z7B7 95 aa0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 NDUFA11Q86Y39 141 aa0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 KCNRGQ8N5I3 272 aa0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 C5orf56Q8N8D9 126 aa0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 TCEAL4Q96EI5 215 aa0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 TMEM14BQ9NUH8 114 aa0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 LSM2Q9Y333 95 aaKnown RBP0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 MUC5BQ9HC84 5762 aaPredicted RBP0.4□□□□□ -2.35
TRAPPC11-207ENST00000511409 CCDC171Q6TFL3 1326 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 FER1L6Q2WGJ9 1857 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 NINQ8N4C6 2090 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 NBDYA0A0U1RRE5 68 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 FAM236AA0A1B0GUQ0 79 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 FAM236BA0A1B0GV22 79 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 TCRBV3S1A0A5B6 114 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 RBAKDNA6NC62 111 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 ZNF670-ZNF695F2Z2N8 137 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 NPFFO15130 113 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 SNCGO76070 127 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 NCR2O95944 276 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 ARPC4P59998 168 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 RPS25P62851 125 aaKnown RBP0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 SELENOWP63302 87 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 S100A12P80511 92 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 MIC13Q5XKP0 118 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 SCIMPQ6UWF3 145 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 TPT1P8Q9HAU6 139 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 ARAP1Q96P48 1450 aa0.39□□□□□ -2.35
TRAPPC11-207ENST00000511409 OVOS2A0A0J9YW53 1432 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 ARHGAP31Q2M1Z3 1444 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 OVOS2Q6IE36 1432 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 ATG2AQ2TAZ0 1938 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 UHRF1BP1LA0JNW5 1464 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 TRAV12-2A0A075B6T6 113 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 HMGN1P05114 100 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 PIRTP0C851 137 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 PIPP12273 146 aaPredicted RBP0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 SSBP1Q04837 148 aaKnown RBP0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 SPANXN1Q5VSR9 72 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 LINC01545Q5VT33 79 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 OR2T2Q6IF00 324 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 CYP2G1PQ6ZSU1 146 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 VSTM2AQ8TAG5 236 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 IFI27L1Q96BM0 104 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 DSCR8Q96T75 97 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 TSC22D3Q99576 134 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 RPRMQ9NS64 109 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 TMEM242Q9NWH2 141 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 NDUFA12Q9UI09 145 aa0.38□□□□□ -2.35
TRAPPC11-207ENST00000511409 PIGBOS1A0A0B4J2F0 54 aa0.37□□□□□ -2.35
TRAPPC11-207ENST00000511409 MCRIP1C9JLW8 97 aa0.37□□□□□ -2.35
TRAPPC11-207ENST00000511409 F2Z2F3 143 aa0.37□□□□□ -2.35
TRAPPC11-207ENST00000511409 M0R129 80 aa0.37□□□□□ -2.35
TRAPPC11-207ENST00000511409 NDUFB6O95139 128 aa0.37□□□□□ -2.35
TRAPPC11-207ENST00000511409 IL5P05113 134 aa0.37□□□□□ -2.35
TRAPPC11-207ENST00000511409 ELOF1P60002 83 aaKnown RBP0.37□□□□□ -2.35
TRAPPC11-207ENST00000511409 UBE2G1P62253 170 aa0.37□□□□□ -2.35
TRAPPC11-207ENST00000511409 FAM74A4Q5TZK3 123 aa0.37□□□□□ -2.35
TRAPPC11-207ENST00000511409 COPS9Q8WXC6 57 aa0.37□□□□□ -2.35
TRAPPC11-207ENST00000511409 SPTSSAQ969W0 71 aa0.37□□□□□ -2.35
TRAPPC11-207ENST00000511409 FAM107BQ9H098 131 aa0.37□□□□□ -2.35
TRAPPC11-207ENST00000511409 CCDC167Q9P0B6 97 aa0.37□□□□□ -2.35
TRAPPC11-207ENST00000511409 USP24Q9UPU5 2620 aa0.37□□□□□ -2.35
TRAPPC11-207ENST00000511409 FHAD1B1AJZ9 1412 aa0.37□□□□□ -2.35
TRAPPC11-207ENST00000511409 MYH1P12882 1939 aa0.36□□□□□ -2.35
TRAPPC11-207ENST00000511409 TRAV12-3A0A0B4J271 114 aa0.36□□□□□ -2.35
TRAPPC11-207ENST00000511409 FAM92AA1XBS5 289 aa0.36□□□□□ -2.35
TRAPPC11-207ENST00000511409 FAM25AB3EWG3 89 aa0.36□□□□□ -2.35
TRAPPC11-207ENST00000511409 FAM25CB3EWG5 89 aa0.36□□□□□ -2.35
TRAPPC11-207ENST00000511409 FAM25GB3EWG6 89 aa0.36□□□□□ -2.35
TRAPPC11-207ENST00000511409 IFNA17P01571 189 aa0.36□□□□□ -2.35
TRAPPC11-207ENST00000511409 RPL37P61927 97 aaKnown RBP0.36□□□□□ -2.35
TRAPPC11-207ENST00000511409 C9orf116Q5BN46 136 aaPredicted RBP0.36□□□□□ -2.35
TRAPPC11-207ENST00000511409 Q6ZUT4 128 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms