RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 PPP1R1AQ13522 171 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 LINC00518Q8N0U6 118 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 Q8N1X5 172 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 TMEM252Q8N6L7 170 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 OR2D3Q8NGH3 330 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 PTH2Q96A98 100 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 C2orf88Q9BSF0 95 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 ZNF492Q9P255 531 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 MUC3AQ02505 3323 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 FXYD6-FXYD2A0A087WZ82 144 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 TGIF2-C20orf24A0A0A6YYL0 155 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 A0A1B0GW15 77 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 GAGE12JA6NER3 117 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 CRISP2P16562 243 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 HNRNPA3P51991 378 aaKnown RBP2.03□□□□□ -2.08
CLOCK-209ENST00000511124 GAGE1Q13065 139 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 GAGE4Q13068 117 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 GAGE5Q13069 117 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 GAGE13Q4V321 117 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 MUC21Q5SSG8 566 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 ZNF767PQ75MW2 155 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 BAGE2Q86Y30 109 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 BAP18Q8IXM2 172 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 TPPP3Q9BW30 176 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 PSG8Q9UQ74 426 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 HSPB11Q9Y547 144 aa2.03□□□□□ -2.08
CLOCK-209ENST00000511124 IGHV3-30P01768 117 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 IGHV3-33P01772 117 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 IGHV3-30-3P0DP02 117 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 IGHV3-30-5P0DP03 117 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 CAMPP49913 170 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 RAB4BP61018 213 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 BSXQ3C1V8 233 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 LRRC37A5PQ49AS3 106 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 TMEM14EPQ6UXP3 125 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 TRIM63Q969Q1 353 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 FAM24AA6NFZ4 105 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 IBA57-AS1B1ANH7 110 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 PDE6DO43924 150 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 ZNF25P17030 456 aaPredicted RBP2.02□□□□□ -2.09
CLOCK-209ENST00000511124 FHITP49789 147 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 UBE2BP63146 152 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 GFI1BQ5VTD9 330 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 SFTA2Q6UW10 78 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 KCNRGQ8N5I3 272 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 Q8TAT8 98 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 PARD6GQ9BYG4 376 aaPredicted RBP2.02□□□□□ -2.09
CLOCK-209ENST00000511124 MRPL16Q9NX20 251 aaKnown RBP2.02□□□□□ -2.09
CLOCK-209ENST00000511124 FLVCR2Q9UPI3 526 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 KLF12Q9Y4X4 402 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 SVEP1Q4LDE5 3571 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 TRAV12-2A0A075B6T6 113 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 A0A087WWL8 130 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 IGHV1-58A0A0C4DH39 117 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 hDV102S1A0JD36 115 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 SLC17A3O00476 420 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 GATCO43716 136 aaKnown RBP2.02□□□□□ -2.09
CLOCK-209ENST00000511124 HLA-DQA1P01909 254 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 MT-ND6P03923 174 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 GNG4P50150 75 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 CRYBA4P53673 196 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 LINC00315P59091 139 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 COX19Q49B96 90 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 AMTNQ6UX39 209 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 COMMD7Q86VX2 200 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 OCC1Q8TAD7 63 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 SMIM12Q96EX1 92 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 KRTAP4-2Q9BYR5 136 aa2.02□□□□□ -2.09
CLOCK-209ENST00000511124 IGKV1D-8A0A087WSZ0 117 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 SPINK4O60575 86 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 IGLV2-8P01709 118 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 S100PP25815 95 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 NKX2-5P52952 324 aaPredicted RBP2.01□□□□□ -2.09
CLOCK-209ENST00000511124 EWSR1Q01844 656 aaKnown RBP eCLIP2.01□□□□□ -2.09
CLOCK-209ENST00000511124 RAB32Q13637 225 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 INSL4Q14641 139 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 ZNF664Q8N3J9 261 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 COPS9Q8WXC6 57 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 PGLYRP4Q96LB8 373 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 MAP1LC3CQ9BXW4 147 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 NPCDR1Q9BY65 106 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 EPDR1Q9UM22 224 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 TRIOO75962 3097 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 MAP1LC3B2A6NCE7 125 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 M0R381 172 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 RTL8CO15255 209 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 PROP1O75360 226 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 DNAH10OSP0CZ25 163 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 ERCC8Q13216 396 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 RASL11AQ6T310 242 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 TMEM75Q8N9X5 138 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 ZNRF2Q8NHG8 242 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 DIRC1Q969H9 104 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 MRAP2Q96G30 205 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 SOSTQ9BQB4 213 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 MAP1LC3BQ9GZQ8 125 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 KLK12Q9UKR0 248 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 PLA2G2DQ9UNK4 145 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 TRBV7-3A0A075B6L6 115 aa2.01□□□□□ -2.09
CLOCK-209ENST00000511124 A0A087WTM6 91 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms