RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, human

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-222	ENST00000510545	AMTN	Q6UX39	209 aa		11.99	□□□□□ -0.49
CLDND1-222	ENST00000510545	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.99	□□□□□ -0.49
CLDND1-222	ENST00000510545	DYNLRB2	Q8TF09	96 aa		11.99	□□□□□ -0.49
CLDND1-222	ENST00000510545	VAMP8	Q9BV40	100 aa		11.99	□□□□□ -0.49
CLDND1-222	ENST00000510545	PAM16	Q9Y3D7	125 aa		11.99	□□□□□ -0.49
CLDND1-222	ENST00000510545	C7orf71	A4D174	169 aa		11.99	□□□□□ -0.49
CLDND1-222	ENST00000510545	INAFM1	C9JVW0	142 aa		11.99	□□□□□ -0.49
CLDND1-222	ENST00000510545	GATA1	P15976	413 aa	Predicted RBP	11.99	□□□□□ -0.49
CLDND1-222	ENST00000510545	SPINK13	Q1W4C9	94 aa		11.99	□□□□□ -0.49
CLDND1-222	ENST00000510545	SCRT2	Q9NQ03	307 aa		11.99	□□□□□ -0.49
CLDND1-222	ENST00000510545	SIGLEC8	Q9NYZ4	499 aa		11.99	□□□□□ -0.49
CLDND1-222	ENST00000510545	NDUFA7	O95182	113 aa		11.98	□□□□□ -0.49
CLDND1-222	ENST00000510545	S100A4	P26447	101 aa	Known RBP	11.98	□□□□□ -0.49
CLDND1-222	ENST00000510545	LEP	P41159	167 aa		11.98	□□□□□ -0.49
CLDND1-222	ENST00000510545	NUTF2	P61970	127 aa	Known RBP	11.98	□□□□□ -0.49
CLDND1-222	ENST00000510545	CACNG7	P62955	275 aa		11.98	□□□□□ -0.49
CLDND1-222	ENST00000510545	LINC00173	Q6ZV60	143 aa		11.98	□□□□□ -0.49
CLDND1-222	ENST00000510545	PROK1	P58294	105 aa		11.98	□□□□□ -0.49
CLDND1-222	ENST00000510545	FN1	P02751	2386 aa	Known RBP	11.97	□□□□□ -0.49
CLDND1-222	ENST00000510545	TRAV2	A0A0B4J234	112 aa		11.97	□□□□□ -0.49
CLDND1-222	ENST00000510545		M0R381	172 aa		11.97	□□□□□ -0.49
CLDND1-222	ENST00000510545	DUSP14	O95147	198 aa	Known RBP	11.97	□□□□□ -0.49
CLDND1-222	ENST00000510545	CDKN1B	P46527	198 aa		11.97	□□□□□ -0.49
CLDND1-222	ENST00000510545	PRSS3P2	Q8NHM4	247 aa		11.97	□□□□□ -0.49
CLDND1-222	ENST00000510545	MIEN1	Q9BRT3	115 aa		11.97	□□□□□ -0.49
CLDND1-222	ENST00000510545	ADARB2-AS1	A8MUL3	147 aa		11.96	□□□□□ -0.49
CLDND1-222	ENST00000510545	FAM159A	Q6UWV7	190 aa		11.96	□□□□□ -0.49
CLDND1-222	ENST00000510545	AP5S1	Q9NUS5	200 aa		11.96	□□□□□ -0.49
CLDND1-222	ENST00000510545	MUC4	Q99102	2169 aa		11.96	□□□□□ -0.49
CLDND1-222	ENST00000510545	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.96	□□□□□ -0.5
CLDND1-222	ENST00000510545	PHLDA3	Q9Y5J5	127 aa		11.96	□□□□□ -0.5
CLDND1-222	ENST00000510545	RBMY1B	A6NDE4	496 aa	Known RBP	11.95	□□□□□ -0.5
CLDND1-222	ENST00000510545	RBMY1E	A6NEQ0	496 aa	Known RBP	11.95	□□□□□ -0.5
CLDND1-222	ENST00000510545	RBMY1D	P0C7P1	496 aa	Known RBP	11.95	□□□□□ -0.5
CLDND1-222	ENST00000510545	MED14OS	P0DP75	135 aa		11.95	□□□□□ -0.5
CLDND1-222	ENST00000510545	FXYD7	P58549	80 aa		11.95	□□□□□ -0.5
CLDND1-222	ENST00000510545	FA2H	Q7L5A8	372 aa		11.95	□□□□□ -0.5
CLDND1-222	ENST00000510545	SPATA12	Q7Z6I5	190 aa		11.95	□□□□□ -0.5
CLDND1-222	ENST00000510545	MAP6D1	Q9H9H5	199 aa		11.95	□□□□□ -0.5
CLDND1-222	ENST00000510545	TRAV26-2	A0A0B4J265	109 aa		11.95	□□□□□ -0.5
CLDND1-222	ENST00000510545		H3BMM0	161 aa		11.95	□□□□□ -0.5
CLDND1-222	ENST00000510545	TCAP	O15273	167 aa		11.95	□□□□□ -0.5
CLDND1-222	ENST00000510545	PPBP	P02775	128 aa		11.95	□□□□□ -0.5
CLDND1-222	ENST00000510545	HLA-DRB4	P13762	266 aa		11.95	□□□□□ -0.5
CLDND1-222	ENST00000510545	KRTAP10-3	P60369	221 aa		11.95	□□□□□ -0.5
CLDND1-222	ENST00000510545	JMJD8	Q96S16	334 aa		11.95	□□□□□ -0.5
CLDND1-222	ENST00000510545	HLA-DRB4	X5D2U9	266 aa		11.95	□□□□□ -0.5
CLDND1-222	ENST00000510545		A0A096LNJ9	63 aa		11.94	□□□□□ -0.5
CLDND1-222	ENST00000510545	TCF21	O43680	179 aa		11.94	□□□□□ -0.5
CLDND1-222	ENST00000510545	TNFRSF6B	O95407	300 aa		11.94	□□□□□ -0.5
CLDND1-222	ENST00000510545	CD7	P09564	240 aa		11.94	□□□□□ -0.5
CLDND1-222	ENST00000510545		A8MTW9	85 aa		11.93	□□□□□ -0.5
CLDND1-222	ENST00000510545	LEPROTL1	O95214	131 aa		11.93	□□□□□ -0.5
CLDND1-222	ENST00000510545	RBMY1A1	P0DJD3	496 aa	Known RBP	11.93	□□□□□ -0.5
CLDND1-222	ENST00000510545	RBMY1C	P0DJD4	496 aa		11.93	□□□□□ -0.5
CLDND1-222	ENST00000510545	TSPO	P30536	169 aa		11.93	□□□□□ -0.5
CLDND1-222	ENST00000510545	RBMY1F	Q15415	496 aa	Known RBP	11.93	□□□□□ -0.5
CLDND1-222	ENST00000510545	SMIM15	Q7Z3B0	74 aa		11.93	□□□□□ -0.5
CLDND1-222	ENST00000510545	C2CD3	Q4AC94	2353 aa		11.93	□□□□□ -0.5
CLDND1-222	ENST00000510545	SPAG8	Q99932	426 aa	Predicted RBP	11.93	□□□□□ -0.5
CLDND1-222	ENST00000510545	FLNB	O75369	2602 aa	Known RBP	11.92	□□□□□ -0.5
CLDND1-222	ENST00000510545	CRX	O43186	299 aa	Predicted RBP	11.92	□□□□□ -0.5
CLDND1-222	ENST00000510545	BTF3	P20290	206 aa	Known RBP	11.92	□□□□□ -0.5
CLDND1-222	ENST00000510545	NSUN5P1	Q3KNT7	163 aa		11.92	□□□□□ -0.5
CLDND1-222	ENST00000510545	MRPL52	Q86TS9	123 aa	Known RBP	11.92	□□□□□ -0.5
CLDND1-222	ENST00000510545	C14orf178	Q8N769	122 aa	Predicted RBP	11.92	□□□□□ -0.5
CLDND1-222	ENST00000510545	NRAC	Q8N912	160 aa		11.92	□□□□□ -0.5
CLDND1-222	ENST00000510545	MDFIC	Q9P1T7	246 aa		11.92	□□□□□ -0.5
CLDND1-222	ENST00000510545	IGHV3-16	A0A0C4DH30	117 aa		11.92	□□□□□ -0.5
CLDND1-222	ENST00000510545	NXPH4	O95158	308 aa		11.92	□□□□□ -0.5
CLDND1-222	ENST00000510545		Q8N1Y9	231 aa		11.92	□□□□□ -0.5
CLDND1-222	ENST00000510545	OR4C46	A6NHA9	309 aa		11.91	□□□□□ -0.5
CLDND1-222	ENST00000510545	ODF3L2	Q3SX64	289 aa		11.91	□□□□□ -0.5
CLDND1-222	ENST00000510545	SPATA45	Q537H7	98 aa		11.91	□□□□□ -0.5
CLDND1-222	ENST00000510545	LAMTOR2	Q9Y2Q5	125 aa		11.91	□□□□□ -0.5
CLDND1-222	ENST00000510545	IGHV1OR15-1	A0A075B7D0	117 aa		11.9	□□□□□ -0.5
CLDND1-222	ENST00000510545	OR2K2	Q8NGT1	345 aa		11.9	□□□□□ -0.5
CLDND1-222	ENST00000510545	MAP1LC3A	Q9H492	121 aa		11.9	□□□□□ -0.5
CLDND1-222	ENST00000510545	TRAV25	A0A0B4J276	109 aa		11.9	□□□□□ -0.5
CLDND1-222	ENST00000510545	ATOH7	Q8N100	152 aa		11.9	□□□□□ -0.5
CLDND1-222	ENST00000510545	TMEM70	Q9BUB7	260 aa		11.9	□□□□□ -0.5
CLDND1-222	ENST00000510545	JPT2	Q9H910	190 aa		11.9	□□□□□ -0.5
CLDND1-222	ENST00000510545	C9orf85	Q96MD7	179 aa		11.89	□□□□□ -0.51
CLDND1-222	ENST00000510545	SYS1-DBNDD2	H3BUS1	97 aa		11.89	□□□□□ -0.51
CLDND1-222	ENST00000510545	DPH3P1	Q9H4G8	78 aa		11.89	□□□□□ -0.51
CLDND1-222	ENST00000510545	KIF25-AS1	Q9Y6Z4	181 aa		11.89	□□□□□ -0.51
CLDND1-222	ENST00000510545	IGLV2-18	A0A075B6J9	118 aa		11.88	□□□□□ -0.51
CLDND1-222	ENST00000510545	ZNF747	Q9BV97	191 aa		11.88	□□□□□ -0.51
CLDND1-222	ENST00000510545	JMJD1C	Q15652	2540 aa		11.88	□□□□□ -0.51
CLDND1-222	ENST00000510545	LINC01546	A6NGU7	62 aa		11.87	□□□□□ -0.51
CLDND1-222	ENST00000510545	SAP30	O75446	220 aa		11.87	□□□□□ -0.51
CLDND1-222	ENST00000510545	PRM2	P04554	102 aa		11.87	□□□□□ -0.51
CLDND1-222	ENST00000510545	LINC00315	P59091	139 aa		11.87	□□□□□ -0.51
CLDND1-222	ENST00000510545	AP1S3	Q96PC3	154 aa		11.87	□□□□□ -0.51
CLDND1-222	ENST00000510545	MCRIP2	Q9BUT9	160 aa	Known RBP	11.87	□□□□□ -0.51
CLDND1-222	ENST00000510545	G0S2	P27469	103 aa		11.87	□□□□□ -0.51
CLDND1-222	ENST00000510545	MAJIN	Q3KP22	176 aa		11.87	□□□□□ -0.51
CLDND1-222	ENST00000510545	MRAP2	Q96G30	205 aa		11.87	□□□□□ -0.51
CLDND1-222	ENST00000510545	HSPB8	Q9UJY1	196 aa		11.87	□□□□□ -0.51
CLDND1-222	ENST00000510545	MGP	P08493	103 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms