RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 RBM3P98179 157 aaKnown RBP8.25□□□□□ -1.09
NEK1-206ENST00000510533 C5orf38Q86SI9 138 aa8.25□□□□□ -1.09
NEK1-206ENST00000510533 NLRC5Q86WI3 1866 aa8.25□□□□□ -1.09
NEK1-206ENST00000510533 NBASA2RRP1 2371 aa8.25□□□□□ -1.09
NEK1-206ENST00000510533 Q6ZQT7 251 aa8.25□□□□□ -1.09
NEK1-206ENST00000510533 MUSTN1Q8IVN3 82 aa8.25□□□□□ -1.09
NEK1-206ENST00000510533 A0A0J9YXV3 536 aa8.24□□□□□ -1.09
NEK1-206ENST00000510533 TMEM258P61165 79 aa8.24□□□□□ -1.09
NEK1-206ENST00000510533 RNF138Q8WVD3 245 aa8.24□□□□□ -1.09
NEK1-206ENST00000510533 RITA1Q96K30 269 aa8.24□□□□□ -1.09
NEK1-206ENST00000510533 SLX1AQ9BQ83 275 aa8.24□□□□□ -1.09
NEK1-206ENST00000510533 IGKV2D-24A0A075B6R9 120 aa8.24□□□□□ -1.09
NEK1-206ENST00000510533 B5MCH6 92 aa8.24□□□□□ -1.09
NEK1-206ENST00000510533 CTSGP08311 255 aa8.24□□□□□ -1.09
NEK1-206ENST00000510533 LYPD6Q86Y78 171 aa8.24□□□□□ -1.09
NEK1-206ENST00000510533 RNF152Q8N8N0 203 aa8.24□□□□□ -1.09
NEK1-206ENST00000510533 IGKV1OR2-108A0A075B7D4 117 aa8.24□□□□□ -1.09
NEK1-206ENST00000510533 IGFBPL1Q8WX77 278 aa8.24□□□□□ -1.09
NEK1-206ENST00000510533 A4D1N5 150 aa8.24□□□□□ -1.09
NEK1-206ENST00000510533 CCL24O00175 119 aa8.23□□□□□ -1.09
NEK1-206ENST00000510533 DEFB136Q30KP8 78 aa8.23□□□□□ -1.09
NEK1-206ENST00000510533 GTSF1Q8WW33 167 aa8.23□□□□□ -1.09
NEK1-206ENST00000510533 FAM167A-AS1Q96KT0 104 aa8.23□□□□□ -1.09
NEK1-206ENST00000510533 ICOSQ9Y6W8 199 aa8.23□□□□□ -1.09
NEK1-206ENST00000510533 H0YGX0 51 aa8.23□□□□□ -1.09
NEK1-206ENST00000510533 C16orf54Q6UWD8 224 aa8.23□□□□□ -1.09
NEK1-206ENST00000510533 APRG1Q8IVJ8 170 aa8.23□□□□□ -1.09
NEK1-206ENST00000510533 AJUBAQ96IF1 538 aa8.23□□□□□ -1.09
NEK1-206ENST00000510533 BUB3O43684 328 aa8.23□□□□□ -1.09
NEK1-206ENST00000510533 DEFB105AQ8NG35 78 aa8.23□□□□□ -1.09
NEK1-206ENST00000510533 CGB7P0DN87 165 aa8.23□□□□□ -1.09
NEK1-206ENST00000510533 GRNP28799 593 aaKnown RBP8.23□□□□□ -1.09
NEK1-206ENST00000510533 SND1-IT1Q9HBX3 110 aa8.23□□□□□ -1.09
NEK1-206ENST00000510533 K7EQD1 137 aa8.22□□□□□ -1.09
NEK1-206ENST00000510533 UBE2BP63146 152 aa8.22□□□□□ -1.09
NEK1-206ENST00000510533 MALRD1Q5VYJ5 2156 aa8.22□□□□□ -1.09
NEK1-206ENST00000510533 PLXND1Q9Y4D7 1925 aa8.22□□□□□ -1.09
NEK1-206ENST00000510533 HIGD1BQ9P298 99 aa8.22□□□□□ -1.09
NEK1-206ENST00000510533 PIP4P1Q86T03 277 aa8.22□□□□□ -1.09
NEK1-206ENST00000510533 FXYD2P54710 66 aa8.22□□□□□ -1.09
NEK1-206ENST00000510533 SLURP1P55000 103 aa8.22□□□□□ -1.09
NEK1-206ENST00000510533 EML6Q6ZMW3 1958 aa8.22□□□□□ -1.09
NEK1-206ENST00000510533 DAZ2Q13117 558 aaKnown RBP8.21□□□□□ -1.09
NEK1-206ENST00000510533 DAZ4Q86SG3 579 aaKnown RBP8.21□□□□□ -1.09
NEK1-206ENST00000510533 C16orf74Q96GX8 76 aa8.21□□□□□ -1.09
NEK1-206ENST00000510533 DAZ3Q9NR90 486 aaKnown RBP8.21□□□□□ -1.09
NEK1-206ENST00000510533 SS18L2Q9UHA2 77 aa8.21□□□□□ -1.09
NEK1-206ENST00000510533 WI2-2373I1.2A0A1W2PRP0 233 aa8.21□□□□□ -1.09
NEK1-206ENST00000510533 Q71RC1 249 aaPredicted RBP8.21□□□□□ -1.09
NEK1-206ENST00000510533 TEN1Q86WV5 123 aa8.21□□□□□ -1.1
NEK1-206ENST00000510533 LINC01620Q4KN68 170 aa8.21□□□□□ -1.1
NEK1-206ENST00000510533 KMT2EQ8IZD2 1858 aa8.21□□□□□ -1.1
NEK1-206ENST00000510533 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.21□□□□□ -1.19e-10■■■■■ 36.7
NEK1-206ENST00000510533 SHANK1Q9Y566 2161 aa8.21□□□□□ -1.1
NEK1-206ENST00000510533 IGFL2Q6UWQ7 119 aa8.21□□□□□ -1.1
NEK1-206ENST00000510533 ATP6V0E2Q8NHE4 81 aa8.21□□□□□ -1.1
NEK1-206ENST00000510533 KIAA1671Q9BY89 1806 aa8.2□□□□□ -1.1
NEK1-206ENST00000510533 A0A0B4J2C4 111 aa8.2□□□□□ -1.1
NEK1-206ENST00000510533 FUSP35637 526 aaKnown RBP eCLIP8.2□□□□□ -1.1
NEK1-206ENST00000510533 HIST2H2BCQ6DN03 193 aa8.2□□□□□ -1.1
NEK1-206ENST00000510533 C1orf43Q9BWL3 253 aa8.2□□□□□ -1.1
NEK1-206ENST00000510533 NDUFS5O43920 106 aa8.2□□□□□ -1.1
NEK1-206ENST00000510533 GYPEP15421 78 aa8.2□□□□□ -1.1
NEK1-206ENST00000510533 IGHV4-4A0A075B6R2 117 aa8.2□□□□□ -1.1
NEK1-206ENST00000510533 IGHV4-61A0A0C4DH41 118 aa8.2□□□□□ -1.1
NEK1-206ENST00000510533 PRAC2D3DTV9 90 aa8.2□□□□□ -1.1
NEK1-206ENST00000510533 IGHV4-38-2P0DP08 117 aa8.2□□□□□ -1.1
NEK1-206ENST00000510533 COX7B2Q8TF08 81 aa8.2□□□□□ -1.1
NEK1-206ENST00000510533 TOMM6Q96B49 74 aa8.2□□□□□ -1.1
NEK1-206ENST00000510533 BLCAPP62952 87 aa8.2□□□□□ -1.1
NEK1-206ENST00000510533 C9orf47Q6ZRZ4 202 aa8.2□□□□□ -1.1
NEK1-206ENST00000510533 BAALCQ8WXS3 180 aa8.2□□□□□ -1.1
NEK1-206ENST00000510533 TTTY13Q9BZ97 58 aa8.2□□□□□ -1.1
NEK1-206ENST00000510533 ETDCA0A1B0GVM5 59 aa8.19□□□□□ -1.1
NEK1-206ENST00000510533 IGLV2-23P01705 113 aa8.19□□□□□ -1.1
NEK1-206ENST00000510533 RPL39P62891 51 aaKnown RBP8.19□□□□□ -1.1
NEK1-206ENST00000510533 Q8N9W7 124 aa8.19□□□□□ -1.1
NEK1-206ENST00000510533 CAMK2N2Q96S95 79 aa8.19□□□□□ -1.1
NEK1-206ENST00000510533 COX7A2LO14548 114 aa8.19□□□□□ -1.1
NEK1-206ENST00000510533 TAX1BP3O14907 124 aa8.19□□□□□ -1.1
NEK1-206ENST00000510533 WFDC2Q14508 124 aa8.19□□□□□ -1.1
NEK1-206ENST00000510533 Q9HAA7 133 aa8.19□□□□□ -1.1
NEK1-206ENST00000510533 WT1P19544 449 aaPredicted RBP8.19□□□□□ -1.1
NEK1-206ENST00000510533 OPRPNQ99935 248 aaPredicted RBP8.19□□□□□ -1.1
NEK1-206ENST00000510533 DKK4Q9UBT3 224 aa8.19□□□□□ -1.1
NEK1-206ENST00000510533 TEX22C9J3V5 150 aa8.19□□□□□ -1.1
NEK1-206ENST00000510533 E9PLD3 99 aa8.19□□□□□ -1.1
NEK1-206ENST00000510533 IGHG2P01859 326 aa8.19□□□□□ -1.1
NEK1-206ENST00000510533 CTRLP40313 264 aa8.18□□□□□ -1.1
NEK1-206ENST00000510533 Q8N1Y9 231 aa8.18□□□□□ -1.1
NEK1-206ENST00000510533 RPL18AQ02543 176 aaKnown RBP8.18□□□□□ -1.1
NEK1-206ENST00000510533 MRPL23Q16540 153 aaKnown RBP8.18□□□□□ -1.1
NEK1-206ENST00000510533 TIMM17AQ99595 171 aa8.18□□□□□ -1.1
NEK1-206ENST00000510533 IGLV10-54A0A075B6I4 117 aa8.18□□□□□ -1.1
NEK1-206ENST00000510533 MED14OSP0DP75 135 aa8.18□□□□□ -1.1
NEK1-206ENST00000510533 C5orf56Q8N8D9 126 aa8.18□□□□□ -1.1
NEK1-206ENST00000510533 IGLV2-14P01704 120 aa8.18□□□□□ -1.1
NEK1-206ENST00000510533 RNASE8Q8TDE3 154 aaKnown RBP8.18□□□□□ -1.1
NEK1-206ENST00000510533 ZMAT4Q9H898 229 aa8.18□□□□□ -1.1
NEK1-206ENST00000510533 PCNX1Q96RV3 2341 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms