RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 PCLOQ9Y6V0 5065 aa12.67□□□□□ -0.38
LSM6-206ENST00000510331 M0R036 132 aa12.67□□□□□ -0.38
LSM6-206ENST00000510331 SH2D1AO60880 128 aa12.67□□□□□ -0.38
LSM6-206ENST00000510331 ASIPP42127 132 aa12.67□□□□□ -0.38
LSM6-206ENST00000510331 AKR1C3P42330 323 aa12.67□□□□□ -0.38
LSM6-206ENST00000510331 CRIP1P50238 77 aa12.67□□□□□ -0.38
LSM6-206ENST00000510331 MBD3L1Q8WWY6 194 aa12.67□□□□□ -0.38
LSM6-206ENST00000510331 FABP5P3A8MUU1 101 aa12.66□□□□□ -0.38
LSM6-206ENST00000510331 B4DEV8 164 aa12.66□□□□□ -0.38
LSM6-206ENST00000510331 H3BVH4 76 aa12.66□□□□□ -0.38
LSM6-206ENST00000510331 LTAP01374 205 aa12.66□□□□□ -0.38
LSM6-206ENST00000510331 TPT1P13693 172 aaKnown RBP12.66□□□□□ -0.38
LSM6-206ENST00000510331 SLC25A29Q8N8R3 303 aa12.66□□□□□ -0.38
LSM6-206ENST00000510331 NHLRC2Q8NBF2 726 aa12.66□□□□□ -0.38
LSM6-206ENST00000510331 TXNDC17Q9BRA2 123 aa12.66□□□□□ -0.38
LSM6-206ENST00000510331 LRP1BQ9NZR2 4599 aa12.66□□□□□ -0.38
LSM6-206ENST00000510331 SCO2A0A1W2PP80 73 aa12.65□□□□□ -0.38
LSM6-206ENST00000510331 S100A4P26447 101 aaKnown RBP12.65□□□□□ -0.38
LSM6-206ENST00000510331 FAM162BQ5T6X4 162 aa12.65□□□□□ -0.38
LSM6-206ENST00000510331 COX8CQ7Z4L0 72 aa12.65□□□□□ -0.38
LSM6-206ENST00000510331 PTH2Q96A98 100 aa12.65□□□□□ -0.38
LSM6-206ENST00000510331 ZFP30Q9Y2G7 519 aa12.65□□□□□ -0.38
LSM6-206ENST00000510331 TRBV6-1A0A0K0K1D8 114 aa12.64□□□□□ -0.39
LSM6-206ENST00000510331 MED14OSP0DP75 135 aa12.64□□□□□ -0.39
LSM6-206ENST00000510331 EIF5AP63241 154 aaKnown RBP12.64□□□□□ -0.39
LSM6-206ENST00000510331 Q6ZRN7 208 aaPredicted RBP12.64□□□□□ -0.39
LSM6-206ENST00000510331 GRIFINA4D1Z8 144 aa12.63□□□□□ -0.39
LSM6-206ENST00000510331 KRBOX1C9JBD0 128 aa12.63□□□□□ -0.39
LSM6-206ENST00000510331 H2AFB1P0C5Y9 115 aa12.63□□□□□ -0.39
LSM6-206ENST00000510331 RHOHQ15669 191 aa12.63□□□□□ -0.39
LSM6-206ENST00000510331 PARLQ9H300 379 aa12.63□□□□□ -0.39
LSM6-206ENST00000510331 IL36BQ9NZH7 164 aa12.63□□□□□ -0.39
LSM6-206ENST00000510331 DNAH5Q8TE73 4624 aa12.63□□□□□ -0.39
LSM6-206ENST00000510331 TMSB15BA0A087X1C1 80 aa12.62□□□□□ -0.39
LSM6-206ENST00000510331 TRBV6-4A0A1B0GX49 114 aa12.62□□□□□ -0.39
LSM6-206ENST00000510331 C16orf90A8MZG2 172 aa12.62□□□□□ -0.39
LSM6-206ENST00000510331 BTF3P20290 206 aaKnown RBP12.62□□□□□ -0.39
LSM6-206ENST00000510331 ZNF674Q2M3X9 581 aa12.62□□□□□ -0.39
LSM6-206ENST00000510331 TCTE3Q8IZS6 198 aa12.62□□□□□ -0.39
LSM6-206ENST00000510331 JPT2Q9H910 190 aa12.62□□□□□ -0.39
LSM6-206ENST00000510331 TNFRSF18Q9Y5U5 241 aa12.62□□□□□ -0.39
LSM6-206ENST00000510331 LY96Q9Y6Y9 160 aa12.62□□□□□ -0.39
LSM6-206ENST00000510331 LGALSLQ3ZCW2 172 aaPredicted RBP12.61□□□□□ -0.39
LSM6-206ENST00000510331 LINC01559Q495D7 138 aa12.61□□□□□ -0.39
LSM6-206ENST00000510331 Q6ZSN1 163 aa12.61□□□□□ -0.39
LSM6-206ENST00000510331 PRADC1Q9BSG0 188 aa12.61□□□□□ -0.39
LSM6-206ENST00000510331 CIDEAO60543 219 aa12.6□□□□□ -0.39
LSM6-206ENST00000510331 ARMS2P0C7Q2 107 aa12.6□□□□□ -0.39
LSM6-206ENST00000510331 MGST1P10620 155 aaKnown RBP12.6□□□□□ -0.39
LSM6-206ENST00000510331 CCL20P78556 96 aa12.6□□□□□ -0.39
LSM6-206ENST00000510331 DNLZQ5SXM8 178 aa12.6□□□□□ -0.39
LSM6-206ENST00000510331 SH2D6Q7Z4S9 175 aa12.6□□□□□ -0.39
LSM6-206ENST00000510331 SPATA12Q7Z6I5 190 aa12.6□□□□□ -0.39
LSM6-206ENST00000510331 SAMD10Q9BYL1 202 aa12.6□□□□□ -0.39
LSM6-206ENST00000510331 A8MWV9 139 aa12.59□□□□□ -0.39
LSM6-206ENST00000510331 DNAH10OSP0CZ25 163 aa12.59□□□□□ -0.39
LSM6-206ENST00000510331 PIK3CD-AS1Q5SR53 167 aa12.59□□□□□ -0.39
LSM6-206ENST00000510331 DMRTA1Q5VZB9 504 aa12.59□□□□□ -0.39
LSM6-206ENST00000510331 UFSP1Q6NVU6 142 aa12.59□□□□□ -0.39
LSM6-206ENST00000510331 Q6ZNX1 250 aa12.59□□□□□ -0.39
LSM6-206ENST00000510331 GNG13Q9P2W3 67 aa12.59□□□□□ -0.39
LSM6-206ENST00000510331 HSPG2P98160 4391 aa12.59□□□□□ -0.39
LSM6-206ENST00000510331 TIRAPP58753 221 aa12.58□□□□□ -0.4
LSM6-206ENST00000510331 KRTAP10-2P60368 255 aa12.58□□□□□ -0.4
LSM6-206ENST00000510331 ZFP2Q6ZN57 461 aa12.58□□□□□ -0.4
LSM6-206ENST00000510331 APOBP04114 4563 aaKnown RBP12.57□□□□□ -0.4
LSM6-206ENST00000510331 ABCA13Q86UQ4 5058 aa12.57□□□□□ -0.4
LSM6-206ENST00000510331 hCG_2014768A0A024R1R8 64 aa12.57□□□□□ -0.4
LSM6-206ENST00000510331 LINC00694P0DN24 101 aa12.57□□□□□ -0.4
LSM6-206ENST00000510331 RPL19P84098 196 aaKnown RBP12.57□□□□□ -0.4
LSM6-206ENST00000510331 SYT8Q8NBV8 401 aa12.57□□□□□ -0.4
LSM6-206ENST00000510331 DERL1Q9BUN8 251 aa12.57□□□□□ -0.4
LSM6-206ENST00000510331 SCRT2Q9NQ03 307 aa12.57□□□□□ -0.4
LSM6-206ENST00000510331 MANBALQ9NQG1 85 aa12.57□□□□□ -0.4
LSM6-206ENST00000510331 M0R381 172 aa12.56□□□□□ -0.4
LSM6-206ENST00000510331 C1QBP02746 253 aa12.56□□□□□ -0.4
LSM6-206ENST00000510331 S100A9P06702 114 aaKnown RBP12.56□□□□□ -0.4
LSM6-206ENST00000510331 EVI2AP22794 236 aa12.56□□□□□ -0.4
LSM6-206ENST00000510331 FAM74A4Q5TZK3 123 aa12.56□□□□□ -0.4
LSM6-206ENST00000510331 C14orf178Q8N769 122 aaPredicted RBP12.56□□□□□ -0.4
LSM6-206ENST00000510331 MSRB1Q9NZV6 116 aa12.56□□□□□ -0.4
LSM6-206ENST00000510331 Q9UF83 564 aa12.56□□□□□ -0.4
LSM6-206ENST00000510331 PHLDA3Q9Y5J5 127 aa12.56□□□□□ -0.4
LSM6-206ENST00000510331 TRAV1-1A0A0B4J248 108 aa12.55□□□□□ -0.4
LSM6-206ENST00000510331 GAGE12JA6NER3 117 aa12.55□□□□□ -0.4
LSM6-206ENST00000510331 CRYGDP07320 174 aa12.55□□□□□ -0.4
LSM6-206ENST00000510331 RPL35P42766 123 aaKnown RBP12.55□□□□□ -0.4
LSM6-206ENST00000510331 RAB5CP51148 216 aa12.55□□□□□ -0.4
LSM6-206ENST00000510331 GAGE1Q13065 139 aa12.55□□□□□ -0.4
LSM6-206ENST00000510331 GAGE4Q13068 117 aa12.55□□□□□ -0.4
LSM6-206ENST00000510331 GAGE5Q13069 117 aa12.55□□□□□ -0.4
LSM6-206ENST00000510331 GAGE13Q4V321 117 aa12.55□□□□□ -0.4
LSM6-206ENST00000510331 PRR27Q6MZM9 219 aa12.55□□□□□ -0.4
LSM6-206ENST00000510331 BAGE2Q86Y30 109 aa12.55□□□□□ -0.4
LSM6-206ENST00000510331 C11orf52Q96A22 123 aa12.55□□□□□ -0.4
LSM6-206ENST00000510331 MLST8Q9BVC4 326 aa12.55□□□□□ -0.4
LSM6-206ENST00000510331 TRAV9-2A0A087WT02 112 aa12.54□□□□□ -0.4
LSM6-206ENST00000510331 A0A087WWL8 130 aa12.54□□□□□ -0.4
LSM6-206ENST00000510331 IGHV3-38A0A0C4DH36 116 aa12.54□□□□□ -0.4
LSM6-206ENST00000510331 RHODO00212 210 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms