RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 ARHGEF12Q9NZN5 1544 aa2.56□□□□□ -2
SMARCA5-202ENST00000508573 SHROOM2Q13796 1616 aa2.56□□□□□ -2
SMARCA5-202ENST00000508573 COL24A1Q17RW2 1714 aa2.56□□□□□ -2
SMARCA5-202ENST00000508573 CASZ1Q86V15 1759 aa2.56□□□□□ -2
SMARCA5-202ENST00000508573 HMSDA8MTL9 139 aa2.55□□□□□ -2
SMARCA5-202ENST00000508573 ATOX1O00244 68 aa2.55□□□□□ -2
SMARCA5-202ENST00000508573 MGAMO43451 1857 aa2.55□□□□□ -2
SMARCA5-202ENST00000508573 LRP5O75197 1615 aa2.55□□□□□ -2
SMARCA5-202ENST00000508573 SCN4AP35499 1836 aa2.55□□□□□ -2
SMARCA5-202ENST00000508573 FAUP35544 74 aaKnown RBP2.55□□□□□ -2
SMARCA5-202ENST00000508573 MIR22HGQ0VDD5 57 aa2.55□□□□□ -2
SMARCA5-202ENST00000508573 ZNF791Q3KP31 576 aaPredicted RBP2.55□□□□□ -2
SMARCA5-202ENST00000508573 ZC3H13Q5T200 1668 aaKnown RBP2.55□□□□□ -2
SMARCA5-202ENST00000508573 THADAQ6YHU6 1953 aa2.55□□□□□ -2
SMARCA5-202ENST00000508573 OR8B3Q8NGG8 313 aa2.55□□□□□ -2
SMARCA5-202ENST00000508573 FAM213BQ8TBF2 198 aa2.55□□□□□ -2
SMARCA5-202ENST00000508573 CYSTM1Q9H1C7 97 aa2.55□□□□□ -2
SMARCA5-202ENST00000508573 SHANK2Q9UPX8 1470 aa2.55□□□□□ -2
SMARCA5-202ENST00000508573 CPAMD8Q8IZJ3 1885 aa2.54□□□□□ -2
SMARCA5-202ENST00000508573 KIF20BQ96Q89 1820 aa2.54□□□□□ -2
SMARCA5-202ENST00000508573 STRCQ7RTU9 1775 aa2.54□□□□□ -2
SMARCA5-202ENST00000508573 CDC42BPBQ9Y5S2 1711 aa2.54□□□□□ -2
SMARCA5-202ENST00000508573 PXDNQ92626 1479 aa2.54□□□□□ -2
SMARCA5-202ENST00000508573 NLRP1Q9C000 1473 aa2.54□□□□□ -2
SMARCA5-202ENST00000508573 RTL8CO15255 209 aa2.54□□□□□ -2
SMARCA5-202ENST00000508573 HINT1P49773 126 aaPredicted RBP2.54□□□□□ -2
SMARCA5-202ENST00000508573 SLC48A1Q6P1K1 146 aa2.54□□□□□ -2
SMARCA5-202ENST00000508573 MYOZ3Q8TDC0 251 aa2.54□□□□□ -2
SMARCA5-202ENST00000508573 MRPL35Q9NZE8 188 aaKnown RBP2.54□□□□□ -2
SMARCA5-202ENST00000508573 KIF25-AS1Q9Y6Z4 181 aa2.54□□□□□ -2
SMARCA5-202ENST00000508573 DOCK9Q9BZ29 2069 aa2.54□□□□□ -2
SMARCA5-202ENST00000508573 PPLO60437 1756 aa2.54□□□□□ -2
SMARCA5-202ENST00000508573 MUC4Q99102 2169 aa2.53□□□□□ -2
SMARCA5-202ENST00000508573 DAPK1P53355 1430 aa2.53□□□□□ -2
SMARCA5-202ENST00000508573 KIAA1549Q9HCM3 1950 aa2.53□□□□□ -2
SMARCA5-202ENST00000508573 TMSB15BA0A087X1C1 80 aa2.53□□□□□ -2
SMARCA5-202ENST00000508573 TRAV10A0A0B4J240 114 aa2.53□□□□□ -2
SMARCA5-202ENST00000508573 TRAV17A0A0B4J275 112 aa2.53□□□□□ -2
SMARCA5-202ENST00000508573 POLR2JP52435 117 aaKnown RBP2.53□□□□□ -2
SMARCA5-202ENST00000508573 SEC11AP67812 179 aa2.53□□□□□ -2
SMARCA5-202ENST00000508573 CCL8P80075 99 aa2.53□□□□□ -2
SMARCA5-202ENST00000508573 C9orf163Q8N9P6 203 aa2.53□□□□□ -2
SMARCA5-202ENST00000508573 TMEM254Q8TBM7 123 aa2.53□□□□□ -2
SMARCA5-202ENST00000508573 LHFPL6Q9Y693 200 aa2.53□□□□□ -2
SMARCA5-202ENST00000508573 SPCS1Q9Y6A9 102 aa2.53□□□□□ -2
SMARCA5-202ENST00000508573 ANK1P16157 1881 aa2.53□□□□□ -2
SMARCA5-202ENST00000508573 DOCK1Q14185 1865 aa2.53□□□□□ -2
SMARCA5-202ENST00000508573 PLIN4Q96Q06 1357 aa2.52□□□□□ -2.01
SMARCA5-202ENST00000508573 TRAV2A0A0B4J234 112 aa2.52□□□□□ -2.01
SMARCA5-202ENST00000508573 SNRNP200O75643 2136 aaKnown RBP2.52□□□□□ -2.01
SMARCA5-202ENST00000508573 ERC2-IT1O76042 136 aa2.52□□□□□ -2.01
SMARCA5-202ENST00000508573 TFF1P04155 84 aa2.52□□□□□ -2.01
SMARCA5-202ENST00000508573 GNG11P61952 73 aa2.52□□□□□ -2.01
SMARCA5-202ENST00000508573 C9orf116Q5BN46 136 aaPredicted RBP2.52□□□□□ -2.01
SMARCA5-202ENST00000508573 LINC00299Q6ZSB3 139 aa2.52□□□□□ -2.01
SMARCA5-202ENST00000508573 PPDPFLQ8WWR9 84 aa2.52□□□□□ -2.01
SMARCA5-202ENST00000508573 ST20Q9HBF5 79 aa2.52□□□□□ -2.01
SMARCA5-202ENST00000508573 CYTL1Q9NRR1 136 aa2.52□□□□□ -2.01
SMARCA5-202ENST00000508573 R4GN34 69 aa2.52□□□□□ -2.01
SMARCA5-202ENST00000508573 MYH8P13535 1937 aa2.52□□□□□ -2.01
SMARCA5-202ENST00000508573 MAGI3Q5TCQ9 1506 aa2.52□□□□□ -2.01
SMARCA5-202ENST00000508573 TRAV12-1A0A0B4J245 112 aa2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 TCRBV4S1A1TA0A5B7 111 aa2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 H3BRM9 83 aa2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 IGLC2P0DOY2 106 aa2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 IGLC3P0DOY3 106 aa2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 CXCL8P10145 99 aa2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 RNASE2P10153 161 aaKnown RBP2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 ADIRFQ15847 76 aa2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 KRTAP26-1Q6PEX3 210 aa2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 HMGN2P46Q86SG4 172 aa2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 SERP2Q8N6R1 65 aa2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 SPTSSBQ8NFR3 76 aa2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 CACFD1Q9UGQ2 172 aa2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 PRO0461Q9UI25 63 aa2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 TUBGCP6Q96RT7 1819 aa2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 PLA2R1Q13018 1463 aa2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 CDK12Q9NYV4 1490 aaPredicted RBP2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 SCN3AQ9NY46 2000 aa2.51□□□□□ -2.01
SMARCA5-202ENST00000508573 EML5Q05BV3 1969 aa2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 DIDO1Q9BTC0 2240 aaKnown RBP2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 PIGBOS1A0A0B4J2F0 54 aa2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 CCL16O15467 120 aa2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 CFDP00746 253 aaPredicted RBP2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 MDKP21741 143 aaPredicted RBP2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 KRTDAPP60985 99 aa2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 ETDBQ3ZM63 59 aa2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 BVES-AS1Q5T3Y7 98 aa2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 RPL7L1Q6DKI1 246 aaKnown RBP2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 ZNF833PQ6ZTB9 187 aa2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 OR10AG1Q8NH19 301 aa2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 MGST2Q99735 147 aa2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 SCRT1Q9BWW7 348 aa2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 RABAC1Q9UI14 185 aa2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 MUC22E2RYF6 1773 aaPredicted RBP2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 RGPD4Q7Z3J3 1758 aa2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 PTPRFP10586 1907 aa2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 TET3O43151 1660 aa2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 PLXNA4Q9HCM2 1894 aa2.5□□□□□ -2.01
SMARCA5-202ENST00000508573 KIF14Q15058 1648 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms