RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 TMSB15BA0A087X1C1 80 aa2.35□□□□□ -2.03
GYPA-205ENST00000508337 ERC2-IT1O76042 136 aa2.35□□□□□ -2.03
GYPA-205ENST00000508337 KRTDAPP60985 99 aa2.35□□□□□ -2.03
GYPA-205ENST00000508337 CCL8P80075 99 aa2.35□□□□□ -2.03
GYPA-205ENST00000508337 C15orf53Q8NAA6 179 aa2.35□□□□□ -2.03
GYPA-205ENST00000508337 Q8TAT8 98 aa2.35□□□□□ -2.03
GYPA-205ENST00000508337 CMTM2Q8TAZ6 248 aa2.35□□□□□ -2.03
GYPA-205ENST00000508337 MGST2Q99735 147 aa2.35□□□□□ -2.03
GYPA-205ENST00000508337 ARHGAP5Q13017 1502 aa2.35□□□□□ -2.03
GYPA-205ENST00000508337 MAP3K1Q13233 1512 aa2.35□□□□□ -2.03
GYPA-205ENST00000508337 NISCHQ9Y2I1 1504 aa2.35□□□□□ -2.03
GYPA-205ENST00000508337 UBR2Q8IWV8 1755 aa2.35□□□□□ -2.03
GYPA-205ENST00000508337 LTBP4Q8N2S1 1624 aa2.35□□□□□ -2.03
GYPA-205ENST00000508337 SHANK1Q9Y566 2161 aa2.34□□□□□ -2.03
GYPA-205ENST00000508337 FYCO1Q9BQS8 1478 aa2.34□□□□□ -2.03
GYPA-205ENST00000508337 ADGRB3O60242 1522 aa2.34□□□□□ -2.03
GYPA-205ENST00000508337 IBA57-AS1B1ANH7 110 aa2.34□□□□□ -2.03
GYPA-205ENST00000508337 ATOX1O00244 68 aa2.34□□□□□ -2.03
GYPA-205ENST00000508337 POLR2JP52435 117 aaKnown RBP2.34□□□□□ -2.03
GYPA-205ENST00000508337 PYDC2Q56P42 97 aa2.34□□□□□ -2.03
GYPA-205ENST00000508337 C9orf116Q5BN46 136 aaPredicted RBP2.34□□□□□ -2.03
GYPA-205ENST00000508337 MYOZ3Q8TDC0 251 aa2.34□□□□□ -2.03
GYPA-205ENST00000508337 SPCS1Q9Y6A9 102 aa2.34□□□□□ -2.03
GYPA-205ENST00000508337 TRPM3Q9HCF6 1732 aaPredicted RBP2.34□□□□□ -2.04
GYPA-205ENST00000508337 CPSF1Q10570 1443 aaKnown RBP2.34□□□□□ -2.04
GYPA-205ENST00000508337 CASKIN1Q8WXD9 1431 aa2.34□□□□□ -2.04
GYPA-205ENST00000508337 SCAPERQ9BY12 1400 aa2.34□□□□□ -2.04
GYPA-205ENST00000508337 SCAF11Q99590 1463 aaKnown RBP2.33□□□□□ -2.04
GYPA-205ENST00000508337 COL5A1P20908 1838 aaPredicted RBP2.33□□□□□ -2.04
GYPA-205ENST00000508337 PHIPQ8WWQ0 1821 aa2.33□□□□□ -2.04
GYPA-205ENST00000508337 WNK3Q9BYP7 1800 aa2.33□□□□□ -2.04
GYPA-205ENST00000508337 HELZP42694 1942 aaKnown RBP2.33□□□□□ -2.04
GYPA-205ENST00000508337 DNMBPQ6XZF7 1577 aa2.33□□□□□ -2.04
GYPA-205ENST00000508337 ALPK3Q96L96 1907 aa2.33□□□□□ -2.04
GYPA-205ENST00000508337 TNRC6AQ8NDV7 1962 aaKnown RBP2.33□□□□□ -2.04
GYPA-205ENST00000508337 A0A087WSZ3 146 aa2.33□□□□□ -2.04
GYPA-205ENST00000508337 CRYM-AS1A6NIL9 109 aa2.33□□□□□ -2.04
GYPA-205ENST00000508337 HCG22E2RYF7 251 aa2.33□□□□□ -2.04
GYPA-205ENST00000508337 J3QRE1 110 aa2.33□□□□□ -2.04
GYPA-205ENST00000508337 MIFP14174 115 aa2.33□□□□□ -2.04
GYPA-205ENST00000508337 Q1T7F1 81 aa2.33□□□□□ -2.04
GYPA-205ENST00000508337 SLC48A1Q6P1K1 146 aa2.33□□□□□ -2.04
GYPA-205ENST00000508337 PPDPFLQ8WWR9 84 aa2.33□□□□□ -2.04
GYPA-205ENST00000508337 ST20Q9HBF5 79 aa2.33□□□□□ -2.04
GYPA-205ENST00000508337 NDUFB11Q9NX14 153 aa2.33□□□□□ -2.04
GYPA-205ENST00000508337 MRPL35Q9NZE8 188 aaKnown RBP2.33□□□□□ -2.04
GYPA-205ENST00000508337 GOLGA3Q08378 1498 aa2.33□□□□□ -2.04
GYPA-205ENST00000508337 AKAP11Q9UKA4 1901 aa2.32□□□□□ -2.04
GYPA-205ENST00000508337 MYH13Q9UKX3 1938 aa2.32□□□□□ -2.04
GYPA-205ENST00000508337 TRPM1Q7Z4N2 1603 aa2.32□□□□□ -2.04
GYPA-205ENST00000508337 TRBV7-7A0A0K0K1E9 115 aa2.32□□□□□ -2.04
GYPA-205ENST00000508337 NAP1L6A6NFF2 107 aa2.32□□□□□ -2.04
GYPA-205ENST00000508337 ODF3BA8MYP8 253 aa2.32□□□□□ -2.04
GYPA-205ENST00000508337 H3BRM9 83 aa2.32□□□□□ -2.04
GYPA-205ENST00000508337 PSCAO43653 123 aa2.32□□□□□ -2.04
GYPA-205ENST00000508337 NUPR1O60356 82 aa2.32□□□□□ -2.04
GYPA-205ENST00000508337 CXCL8P10145 99 aa2.32□□□□□ -2.04
GYPA-205ENST00000508337 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
GYPA-205ENST00000508337 C2orf82Q6UX34 121 aa2.32□□□□□ -2.04
GYPA-205ENST00000508337 C9orf163Q8N9P6 203 aa2.32□□□□□ -2.04
GYPA-205ENST00000508337 NXT2Q9NPJ8 142 aaKnown RBP2.32□□□□□ -2.04
GYPA-205ENST00000508337 MYH9P35579 1960 aaKnown RBP2.32□□□□□ -2.04
GYPA-205ENST00000508337 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
GYPA-205ENST00000508337 TRAV13-2A0A0B4J235 113 aa2.31□□□□□ -2.04
GYPA-205ENST00000508337 TRAV12-1A0A0B4J245 112 aa2.31□□□□□ -2.04
GYPA-205ENST00000508337 WFDC2Q14508 124 aa2.31□□□□□ -2.04
GYPA-205ENST00000508337 ETDBQ3ZM63 59 aa2.31□□□□□ -2.04
GYPA-205ENST00000508337 HCP5Q6MZN7 132 aa2.31□□□□□ -2.04
GYPA-205ENST00000508337 SERP2Q8N6R1 65 aa2.31□□□□□ -2.04
GYPA-205ENST00000508337 MANBALQ9NQG1 85 aa2.31□□□□□ -2.04
GYPA-205ENST00000508337 RABAC1Q9UI14 185 aa2.31□□□□□ -2.04
GYPA-205ENST00000508337 LHFPL6Q9Y693 200 aa2.31□□□□□ -2.04
GYPA-205ENST00000508337 ERVK-7P63135 1459 aa2.31□□□□□ -2.04
GYPA-205ENST00000508337 HEATR5AQ86XA9 2040 aa2.3□□□□□ -2.04
GYPA-205ENST00000508337 TRAV2A0A0B4J234 112 aa2.3□□□□□ -2.04
GYPA-205ENST00000508337 CCL16O15467 120 aa2.3□□□□□ -2.04
GYPA-205ENST00000508337 MPV17LQ2QL34 196 aa2.3□□□□□ -2.04
GYPA-205ENST00000508337 CACFD1Q9UGQ2 172 aa2.3□□□□□ -2.04
GYPA-205ENST00000508337 PLIN4Q96Q06 1357 aa2.3□□□□□ -2.04
GYPA-205ENST00000508337 GLI3P10071 1580 aa2.3□□□□□ -2.04
GYPA-205ENST00000508337 BCORL1Q5H9F3 1711 aa2.3□□□□□ -2.04
GYPA-205ENST00000508337 DIDO1Q9BTC0 2240 aaKnown RBP2.3□□□□□ -2.04
GYPA-205ENST00000508337 CUL9Q8IWT3 2517 aa2.3□□□□□ -2.04
GYPA-205ENST00000508337 ANKRD26Q9UPS8 1709 aa2.29□□□□□ -2.04
GYPA-205ENST00000508337 GAPVD1Q14C86 1478 aa2.29□□□□□ -2.04
GYPA-205ENST00000508337 CCDC141Q6ZP82 1450 aa2.29□□□□□ -2.04
GYPA-205ENST00000508337 A0A1W2PPM0 123 aa2.29□□□□□ -2.04
GYPA-205ENST00000508337 TMEM30CPA0ZSE6 113 aa2.29□□□□□ -2.04
GYPA-205ENST00000508337 C2orf70A6NJV1 201 aa2.29□□□□□ -2.04
GYPA-205ENST00000508337 HRES1P13985 223 aa2.29□□□□□ -2.04
GYPA-205ENST00000508337 NMSQ5H8A3 153 aa2.29□□□□□ -2.04
GYPA-205ENST00000508337 SFTA2Q6UW10 78 aa2.29□□□□□ -2.04
GYPA-205ENST00000508337 ZNF431Q8TF32 576 aaPredicted RBP2.29□□□□□ -2.04
GYPA-205ENST00000508337 S100ZQ8WXG8 99 aa2.29□□□□□ -2.04
GYPA-205ENST00000508337 IFI27L1Q96BM0 104 aa2.29□□□□□ -2.04
GYPA-205ENST00000508337 AMELYQ99218 206 aa2.29□□□□□ -2.04
GYPA-205ENST00000508337 MGAMO43451 1857 aa2.28□□□□□ -2.04
GYPA-205ENST00000508337 TRIOBPQ9H2D6 2365 aa2.28□□□□□ -2.04
GYPA-205ENST00000508337 TRBV10-3A0A0K0K1G6 114 aa2.28□□□□□ -2.04
GYPA-205ENST00000508337 CFDP00746 253 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms