RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 ZNF80P51504 273 aaPredicted RBP6.81□□□□□ -1.32
PDGFRA-205ENST00000507536 KRTAP10-4P60372 401 aaPredicted RBP6.81□□□□□ -1.32
PDGFRA-205ENST00000507536 GNG5P63218 68 aa6.81□□□□□ -1.32
PDGFRA-205ENST00000507536 ASAH1Q13510 395 aa6.81□□□□□ -1.32
PDGFRA-205ENST00000507536 C21orf62-AS1Q17RA5 79 aa6.81□□□□□ -1.32
PDGFRA-205ENST00000507536 GOLT1AQ6ZVE7 132 aa6.81□□□□□ -1.32
PDGFRA-205ENST00000507536 ATP5SQ99766 215 aa6.81□□□□□ -1.32
PDGFRA-205ENST00000507536 RPH3ALQ9UNE2 315 aa6.81□□□□□ -1.32
PDGFRA-205ENST00000507536 TRBV6-4A0A1B0GX49 114 aa6.8□□□□□ -1.32
PDGFRA-205ENST00000507536 PGPA6NDG6 321 aa6.8□□□□□ -1.32
PDGFRA-205ENST00000507536 KRTAP29-1A8MX34 341 aaPredicted RBP6.8□□□□□ -1.32
PDGFRA-205ENST00000507536 C17orf112F2Z3M2 114 aa6.8□□□□□ -1.32
PDGFRA-205ENST00000507536 LAGE3Q14657 143 aa6.8□□□□□ -1.32
PDGFRA-205ENST00000507536 OR10J3Q5JRS4 329 aa6.8□□□□□ -1.32
PDGFRA-205ENST00000507536 LELP1Q5T871 98 aa6.8□□□□□ -1.32
PDGFRA-205ENST00000507536 ASB13Q8WXK3 278 aa6.8□□□□□ -1.32
PDGFRA-205ENST00000507536 C9orf85Q96MD7 179 aa6.8□□□□□ -1.32
PDGFRA-205ENST00000507536 WFDC1Q9HC57 220 aa6.8□□□□□ -1.32
PDGFRA-205ENST00000507536 SDF2L1Q9HCN8 221 aa6.8□□□□□ -1.32
PDGFRA-205ENST00000507536 MBD2Q9UBB5 411 aa6.8□□□□□ -1.32
PDGFRA-205ENST00000507536 HSPB11Q9Y547 144 aa6.8□□□□□ -1.32
PDGFRA-205ENST00000507536 IGHV3-73A0A0B4J1V6 119 aa6.79□□□□□ -1.32
PDGFRA-205ENST00000507536 TRAV8-6A0A0B4J262 113 aa6.79□□□□□ -1.32
PDGFRA-205ENST00000507536 PFN1P07737 140 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-205ENST00000507536 TAS2R45P59539 299 aa6.79□□□□□ -1.32
PDGFRA-205ENST00000507536 RHOHQ15669 191 aa6.79□□□□□ -1.32
PDGFRA-205ENST00000507536 ZNF876PQ49A33 203 aa6.79□□□□□ -1.32
PDGFRA-205ENST00000507536 ZNF506Q5JVG8 444 aa6.79□□□□□ -1.32
PDGFRA-205ENST00000507536 ARL6IP6Q8N6S5 226 aa6.79□□□□□ -1.32
PDGFRA-205ENST00000507536 TMEM75Q8N9X5 138 aa6.79□□□□□ -1.32
PDGFRA-205ENST00000507536 PPP1R1CQ8WVI7 109 aa6.79□□□□□ -1.32
PDGFRA-205ENST00000507536 SGK494Q96LW2 274 aa6.79□□□□□ -1.32
PDGFRA-205ENST00000507536 TREM1Q9NP99 234 aa6.79□□□□□ -1.32
PDGFRA-205ENST00000507536 Q9UF83 564 aa6.79□□□□□ -1.32
PDGFRA-205ENST00000507536 PGPEP1LA6NFU8 196 aa6.78□□□□□ -1.32
PDGFRA-205ENST00000507536 LECT2O14960 151 aa6.78□□□□□ -1.32
PDGFRA-205ENST00000507536 IGLV2-11P01706 119 aa6.78□□□□□ -1.32
PDGFRA-205ENST00000507536 RNASE3P12724 160 aaKnown RBP6.78□□□□□ -1.32
PDGFRA-205ENST00000507536 RAB2AP61019 212 aa6.78□□□□□ -1.32
PDGFRA-205ENST00000507536 LINC01620Q4KN68 170 aa6.78□□□□□ -1.32
PDGFRA-205ENST00000507536 KCNS1Q96KK3 526 aa6.78□□□□□ -1.32
PDGFRA-205ENST00000507536 SMIM3Q9BZL3 60 aa6.78□□□□□ -1.32
PDGFRA-205ENST00000507536 GTSF1LQ9H1H1 148 aa6.78□□□□□ -1.32
PDGFRA-205ENST00000507536 HMGB3O15347 200 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-205ENST00000507536 MPC2O95563 127 aa6.77□□□□□ -1.33
PDGFRA-205ENST00000507536 IFITM3Q01628 133 aa6.77□□□□□ -1.33
PDGFRA-205ENST00000507536 MZT2BQ6NZ67 158 aa6.77□□□□□ -1.33
PDGFRA-205ENST00000507536 PQLC2Q6ZP29 291 aa6.77□□□□□ -1.33
PDGFRA-205ENST00000507536 SCXQ7RTU7 201 aa6.77□□□□□ -1.33
PDGFRA-205ENST00000507536 DAZ4Q86SG3 579 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-205ENST00000507536 ATP6V0E2Q8NHE4 81 aa6.77□□□□□ -1.33
PDGFRA-205ENST00000507536 CMTM2Q8TAZ6 248 aa6.77□□□□□ -1.33
PDGFRA-205ENST00000507536 PTH2Q96A98 100 aa6.77□□□□□ -1.33
PDGFRA-205ENST00000507536 DNAJC30Q96LL9 226 aa6.77□□□□□ -1.33
PDGFRA-205ENST00000507536 PRADC1Q9BSG0 188 aa6.77□□□□□ -1.33
PDGFRA-205ENST00000507536 DAZ3Q9NR90 486 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-205ENST00000507536 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.76□□□□□ -1.33
PDGFRA-205ENST00000507536 CIDEAO60543 219 aa6.76□□□□□ -1.33
PDGFRA-205ENST00000507536 ARL14EPLP0DKL9 152 aa6.76□□□□□ -1.33
PDGFRA-205ENST00000507536 MGST1P10620 155 aaKnown RBP6.76□□□□□ -1.33
PDGFRA-205ENST00000507536 CYCSP99999 105 aaKnown RBP6.76□□□□□ -1.33
PDGFRA-205ENST00000507536 UFSP1Q6NVU6 142 aa6.76□□□□□ -1.33
PDGFRA-205ENST00000507536 SUN5Q8TC36 379 aa6.76□□□□□ -1.33
PDGFRA-205ENST00000507536 PARLQ9H300 379 aa6.76□□□□□ -1.33
PDGFRA-205ENST00000507536 GGTLC3B5MD39 225 aa6.75□□□□□ -1.33
PDGFRA-205ENST00000507536 GCGP01275 180 aa6.75□□□□□ -1.33
PDGFRA-205ENST00000507536 TCRAP04437 139 aa6.75□□□□□ -1.33
PDGFRA-205ENST00000507536 RPL12P30050 165 aaKnown RBP6.75□□□□□ -1.33
PDGFRA-205ENST00000507536 FAM74A1Q5RGS3 127 aa6.75□□□□□ -1.33
PDGFRA-205ENST00000507536 ENKURQ8TC29 256 aa6.75□□□□□ -1.33
PDGFRA-205ENST00000507536 DEFB104AQ8WTQ1 72 aa6.75□□□□□ -1.33
PDGFRA-205ENST00000507536 TM2D2Q9BX73 214 aa6.75□□□□□ -1.33
PDGFRA-205ENST00000507536 NDUFA13Q9P0J0 144 aa6.75□□□□□ -1.33
PDGFRA-205ENST00000507536 INMT-MINDY4F8WBC2 141 aa6.74□□□□□ -1.33
PDGFRA-205ENST00000507536 TAAR5O14804 337 aa6.74□□□□□ -1.33
PDGFRA-205ENST00000507536 UPK1BO75841 260 aa6.74□□□□□ -1.33
PDGFRA-205ENST00000507536 STAG3L2P0CL84 134 aa6.74□□□□□ -1.33
PDGFRA-205ENST00000507536 STAG3L3P0CL85 134 aa6.74□□□□□ -1.33
PDGFRA-205ENST00000507536 ACOT6Q3I5F7 207 aaPredicted RBP6.74□□□□□ -1.33
PDGFRA-205ENST00000507536 LINC00299Q6ZSB3 139 aa6.74□□□□□ -1.33
PDGFRA-205ENST00000507536 C5orf17Q8NAS9 161 aa6.74□□□□□ -1.33
PDGFRA-205ENST00000507536 SCGB1C1Q8TD33 95 aa6.74□□□□□ -1.33
PDGFRA-205ENST00000507536 BAALCQ8WXS3 180 aa6.74□□□□□ -1.33
PDGFRA-205ENST00000507536 LINC00479Q96M42 142 aa6.74□□□□□ -1.33
PDGFRA-205ENST00000507536 MARVELD1Q9BSK0 173 aa6.74□□□□□ -1.33
PDGFRA-205ENST00000507536 JPT2Q9H910 190 aa6.74□□□□□ -1.33
PDGFRA-205ENST00000507536 PSG8Q9UQ74 426 aa6.74□□□□□ -1.33
PDGFRA-205ENST00000507536 TRAV8-3A0A0A6YYJ7 113 aa6.73□□□□□ -1.33
PDGFRA-205ENST00000507536 IGKV3D-20A0A0C4DH25 116 aa6.73□□□□□ -1.33
PDGFRA-205ENST00000507536 SERTM2A0A1B0GWG4 89 aa6.73□□□□□ -1.33
PDGFRA-205ENST00000507536 A0A1W2PPV4 95 aa6.73□□□□□ -1.33
PDGFRA-205ENST00000507536 GAGE12JA6NER3 117 aa6.73□□□□□ -1.33
PDGFRA-205ENST00000507536 GAGE1Q13065 139 aa6.73□□□□□ -1.33
PDGFRA-205ENST00000507536 GAGE4Q13068 117 aa6.73□□□□□ -1.33
PDGFRA-205ENST00000507536 GAGE5Q13069 117 aa6.73□□□□□ -1.33
PDGFRA-205ENST00000507536 GAGE13Q4V321 117 aa6.73□□□□□ -1.33
PDGFRA-205ENST00000507536 ZFP2Q6ZN57 461 aa6.73□□□□□ -1.33
PDGFRA-205ENST00000507536 C14orf178Q8N769 122 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-205ENST00000507536 OR10G9Q8NGN4 311 aa6.73□□□□□ -1.33
PDGFRA-205ENST00000507536 OR10G7Q8NGN6 311 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms