RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 NXPH4O95158 308 aa6.01□□□□□ -1.45
PDGFC-205ENST00000506880 IGLV2-8P01709 118 aa6.01□□□□□ -1.45
PDGFC-205ENST00000506880 HTN1P15515 57 aa6.01□□□□□ -1.45
PDGFC-205ENST00000506880 CRIP1P50238 77 aa6.01□□□□□ -1.45
PDGFC-205ENST00000506880 FOXA3P55318 350 aaPredicted RBP6.01□□□□□ -1.45
PDGFC-205ENST00000506880 C15orf54Q8N8G6 183 aa6.01□□□□□ -1.45
PDGFC-205ENST00000506880 DERL1Q9BUN8 251 aa6.01□□□□□ -1.45
PDGFC-205ENST00000506880 CNFNQ9BYD5 112 aa6.01□□□□□ -1.45
PDGFC-205ENST00000506880 GSN-AS1Q9NRJ2 163 aa6.01□□□□□ -1.45
PDGFC-205ENST00000506880 NACAE9PAV3 2078 aa6□□□□□ -1.45
PDGFC-205ENST00000506880 TRGV1A0A0A0MS02 117 aa6□□□□□ -1.45
PDGFC-205ENST00000506880 LINC00862A6NCI5 91 aa6□□□□□ -1.45
PDGFC-205ENST00000506880 MGST1P10620 155 aaKnown RBP6□□□□□ -1.45
PDGFC-205ENST00000506880 RNASE3P12724 160 aaKnown RBP6□□□□□ -1.45
PDGFC-205ENST00000506880 IFITM2Q01629 132 aa6□□□□□ -1.45
PDGFC-205ENST00000506880 OR5I1Q13606 314 aa6□□□□□ -1.45
PDGFC-205ENST00000506880 ZNF876PQ49A33 203 aa6□□□□□ -1.45
PDGFC-205ENST00000506880 MUC21Q5SSG8 566 aa6□□□□□ -1.45
PDGFC-205ENST00000506880 Q6ZTC4 211 aa6□□□□□ -1.45
PDGFC-205ENST00000506880 LINC01551Q86U37 167 aa6□□□□□ -1.45
PDGFC-205ENST00000506880 OCC1Q8TAD7 63 aa6□□□□□ -1.45
PDGFC-205ENST00000506880 SGK494Q96LW2 274 aa6□□□□□ -1.45
PDGFC-205ENST00000506880 PRO0255Q9UI72 69 aa6□□□□□ -1.45
PDGFC-205ENST00000506880 NAGKQ9UJ70 344 aa6□□□□□ -1.45
PDGFC-205ENST00000506880 CELA1Q9UNI1 258 aa6□□□□□ -1.45
PDGFC-205ENST00000506880 PHLDA3Q9Y5J5 127 aa6□□□□□ -1.45
PDGFC-205ENST00000506880 TENM2Q9NT68 2774 aa6□□□□□ -1.45
PDGFC-205ENST00000506880 A0A1B0GW15 77 aa5.99□□□□□ -1.45
PDGFC-205ENST00000506880 TRBV6-4A0A1B0GX49 114 aa5.99□□□□□ -1.45
PDGFC-205ENST00000506880 K7EP13 123 aa5.99□□□□□ -1.45
PDGFC-205ENST00000506880 EMP1P54849 157 aa5.99□□□□□ -1.45
PDGFC-205ENST00000506880 NANOS2P60321 138 aaKnown RBP5.99□□□□□ -1.45
PDGFC-205ENST00000506880 RNF212Q495C1 297 aa5.99□□□□□ -1.45
PDGFC-205ENST00000506880 RPP21Q9H633 154 aaKnown RBP5.99□□□□□ -1.45
PDGFC-205ENST00000506880 MDFICQ9P1T7 246 aa5.99□□□□□ -1.45
PDGFC-205ENST00000506880 C11orf21Q9P2W6 132 aa5.99□□□□□ -1.45
PDGFC-205ENST00000506880 CSMD3Q7Z407 3707 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 TRAV26-1A0A087WT03 109 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 TRBV10-1A0A0K0K1A3 114 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 RS1O15537 224 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 GNRH2O43555 120 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 TRGC1P0CF51 173 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 IGLC6P0CF74 106 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 P0DMU3 169 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 FAM231AP0DMU4 169 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 FAM231CP0DMU5 169 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 DEFB130BP0DP73 79 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 DEFB130AP0DP74 79 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 BTF3P20290 206 aaKnown RBP5.98□□□□□ -1.45
PDGFC-205ENST00000506880 CTRLP40313 264 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 TIRAPP58753 221 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 RPL19P84098 196 aaKnown RBP5.98□□□□□ -1.45
PDGFC-205ENST00000506880 LGALS9CQ6DKI2 356 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 Q6ZTI0 123 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 FER1L6-AS1Q8NA97 138 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 OR4C5Q8NGB2 326 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 OR2D3Q8NGH3 330 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 TSKUQ8WUA8 353 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 SEC11CQ9BY50 192 aa5.98□□□□□ -1.45
PDGFC-205ENST00000506880 GAGE12BA1L429 117 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 DEFB4AO15263 64 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 GATCO43716 136 aaKnown RBP5.97□□□□□ -1.45
PDGFC-205ENST00000506880 GAGE7O76087 117 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 S100A8P05109 93 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 ARMS2P0C7Q2 107 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 GAGE12FP0CL80 117 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 GAGE12GP0CL81 117 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 GAGE12IP0CL82 117 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 ERVFC1-1P60608 527 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 RHOHQ15669 191 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 MRPL23Q16540 153 aaKnown RBP5.97□□□□□ -1.45
PDGFC-205ENST00000506880 NDUFA5Q16718 116 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 PRR27Q6MZM9 219 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 NUDT10Q8NFP7 164 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 ISOC2Q96AB3 205 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 BORCS7Q96B45 105 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 ANAPC16Q96DE5 110 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 NUDT11Q96G61 164 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 SFRP2Q96HF1 295 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 AP1S3Q96PC3 154 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 PRADC1Q9BSG0 188 aa5.97□□□□□ -1.45
PDGFC-205ENST00000506880 H3BVH4 76 aa5.96□□□□□ -1.46
PDGFC-205ENST00000506880 H7C1H1 209 aa5.96□□□□□ -1.46
PDGFC-205ENST00000506880 K7EN84 100 aa5.96□□□□□ -1.46
PDGFC-205ENST00000506880 MT-ND4LP03901 98 aa5.96□□□□□ -1.46
PDGFC-205ENST00000506880 SPANXN1Q5VSR9 72 aa5.96□□□□□ -1.46
PDGFC-205ENST00000506880 CFAP126Q5VTH2 177 aa5.96□□□□□ -1.46
PDGFC-205ENST00000506880 SMIM15Q7Z3B0 74 aa5.96□□□□□ -1.46
PDGFC-205ENST00000506880 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.96□□□□□ -1.46
PDGFC-205ENST00000506880 NHLRC2Q8NBF2 726 aa5.96□□□□□ -1.46
PDGFC-205ENST00000506880 BTF3L4Q96K17 158 aa5.96□□□□□ -1.46
PDGFC-205ENST00000506880 IMMP2LQ96T52 175 aa5.96□□□□□ -1.46
PDGFC-205ENST00000506880 TMEM242Q9NWH2 141 aa5.96□□□□□ -1.46
PDGFC-205ENST00000506880 HHLA3Q9XRX5 114 aa5.96□□□□□ -1.46
PDGFC-205ENST00000506880 TRAV9-1A0A075B6T8 112 aa5.95□□□□□ -1.46
PDGFC-205ENST00000506880 TRGV4A0A0C4DH28 118 aa5.95□□□□□ -1.46
PDGFC-205ENST00000506880 TMEM218A2RU14 115 aa5.95□□□□□ -1.46
PDGFC-205ENST00000506880 F5H768 121 aa5.95□□□□□ -1.46
PDGFC-205ENST00000506880 M0R036 132 aa5.95□□□□□ -1.46
PDGFC-205ENST00000506880 PPP1R17O96001 155 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms