RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 SFRP2Q96HF1 295 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 C20orf24Q9BUV8 137 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 SLC25A2Q9BXI2 301 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 SAV1Q9H4B6 383 aaPredicted RBP1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 MRPL36Q9P0J6 103 aaKnown RBP1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 KLF12Q9Y4X4 402 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 YTHDF2Q9Y5A9 579 aaKnown RBP1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 RFNGQ9Y644 331 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 LRBAP50851 2863 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 RAI1Q7Z5J4 1906 aaPredicted RBP1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 SVILO95425 2214 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 JMJD1CQ15652 2540 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 DNHD1Q96M86 4753 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 BSNQ9UPA5 3926 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 ITPR2Q14571 2701 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 SPG11Q96JI7 2443 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 HEATR1Q9H583 2144 aaKnown RBP1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 ADGRG4Q8IZF6 3080 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 TRAV2A0A0B4J234 112 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 IGHV7-4-1A0A0J9YVY3 117 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 A0A1B0GW15 77 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 COLCA2A8K830 154 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 FABP5P3A8MUU1 101 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 GGTLC3B5MD39 225 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 DNASE2O00115 360 aaPredicted RBP1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 OVOL1O14753 267 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 TCF21O43680 179 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 GCGP01275 180 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 INSP01308 110 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 LTAP01374 205 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 P01737 135 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 MT-ND6P03923 174 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 S100A6P06703 90 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 LGALS1P09382 135 aaKnown RBP1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 PYYP10082 97 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 MGST1P10620 155 aaKnown RBP1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 RPS20P60866 119 aaKnown RBP1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 SNRPD3P62318 126 aaKnown RBP1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 USF2Q15853 346 aaPredicted RBP1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 PSG3Q16557 428 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 CENPWQ5EE01 88 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 TMEM78Q5T7P6 136 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 SPATA31B1PQ5VZV4 182 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 LCN12Q6JVE5 192 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 RASL11AQ6T310 242 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 FAM231DQ6ZW35 169 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 TMEM183AQ8IXX5 376 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 FAM24BQ8N5W8 94 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 SIGLECL1Q8N7X8 197 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 OR4B1Q8NGF8 309 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 OR10J6PQ8NGY7 276 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 C4orf3Q8WVX3 66 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 ISOC2Q96AB3 205 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 FAM210BQ96KR6 192 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 LINC00477Q96M19 166 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 TPPP3Q9BW30 176 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 C16orf95Q9H693 158 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 OSTCQ9NRP0 149 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 ZNF586Q9NXT0 402 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 IL36BQ9NZH7 164 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 NAT8BQ9UHF3 227 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 LENEPQ9Y5L5 61 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 SOX21Q9Y651 276 aaPredicted RBP1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 S4R3C0 116 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 SPENQ96T58 3664 aaKnown RBP1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 ESPL1Q14674 2120 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 MYO7BQ6PIF6 2116 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 ZGRF1Q86YA3 2104 aa1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 CHD3Q12873 2000 aaKnown RBP1.61□□□□□ -2.15
TOPBP1-205ENST00000506779 RTTNQ86VV8 2226 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 UTP20O75691 2785 aaKnown RBP1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 ATRQ13535 2644 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 TRBV20OR9-2A0A075B6H5 130 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 TRAV25A0A0B4J276 109 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 ZNF705GA8MUZ8 300 aaPredicted RBP1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 A8MWP6 167 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 F2Z2F3 143 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 LINC01619G3V211 115 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 MRPS12O15235 138 aaKnown RBP1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 GATCO43716 136 aaKnown RBP1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 SCO1O75880 301 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 IGHV3-11P01762 117 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 TYMSP04818 313 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 PFN1P07737 140 aaKnown RBP1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 CBLN1P23435 193 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 TSPOP30536 169 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 RPS10P46783 165 aaKnown RBP1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 ZNF138P52744 262 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 FOXA3P55318 350 aaPredicted RBP1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 ELOBQ15370 118 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 SMUG1Q53HV7 270 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 FAM162BQ5T6X4 162 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 EBLN2Q6P2I7 272 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 C19orf35Q6ZS72 473 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 GOLT1AQ6ZVE7 132 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 SMIM15Q7Z3B0 74 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 ATP5L2Q7Z4Y8 100 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 PRNTQ86SH4 94 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 CBLN2Q8IUK8 224 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms