RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 RCHY1Q96PM5 261 aa13.61□□□□□ -0.23
SMN2-206ENST00000506734 RBMY1A1P0DJD3 496 aaKnown RBP13.6□□□□□ -0.23
SMN2-206ENST00000506734 RBMY1CP0DJD4 496 aa13.6□□□□□ -0.23
SMN2-206ENST00000506734 RBMY1FQ15415 496 aaKnown RBP13.6□□□□□ -0.23
SMN2-206ENST00000506734 MRPL51Q4U2R6 128 aaKnown RBP13.6□□□□□ -0.23
SMN2-206ENST00000506734 SMIM15Q7Z3B0 74 aa13.6□□□□□ -0.23
SMN2-206ENST00000506734 RNF185Q96GF1 192 aa13.6□□□□□ -0.23
SMN2-206ENST00000506734 PACRGQ96M98 296 aaPredicted RBP13.6□□□□□ -0.23
SMN2-206ENST00000506734 C20orf144Q9BQM9 153 aa13.6□□□□□ -0.23
SMN2-206ENST00000506734 C19orf73Q9NVV2 129 aa13.6□□□□□ -0.23
SMN2-206ENST00000506734 PHLDA3Q9Y5J5 127 aa13.6□□□□□ -0.23
SMN2-206ENST00000506734 IGHV3-16A0A0C4DH30 117 aa13.59□□□□□ -0.23
SMN2-206ENST00000506734 RAB4AP20338 218 aa13.59□□□□□ -0.23
SMN2-206ENST00000506734 OR10D4PQ8NGN7 298 aa13.59□□□□□ -0.23
SMN2-206ENST00000506734 TIMM8BQ9Y5J9 83 aaPredicted RBP13.59□□□□□ -0.23
SMN2-206ENST00000506734 D6R8Y8 96 aa13.58□□□□□ -0.23
SMN2-206ENST00000506734 KRTAP24-1Q3LI83 254 aa13.58□□□□□ -0.23
SMN2-206ENST00000506734 C9orf66Q5T8R8 295 aa13.58□□□□□ -0.23
SMN2-206ENST00000506734 ORMDL3Q8N138 153 aa13.58□□□□□ -0.23
SMN2-206ENST00000506734 Q8N1Y9 231 aa13.58□□□□□ -0.23
SMN2-206ENST00000506734 C9orf85Q96MD7 179 aa13.58□□□□□ -0.23
SMN2-206ENST00000506734 TRGV11A0A075B6L2 103 aa13.58□□□□□ -0.24
SMN2-206ENST00000506734 PPBPP02775 128 aa13.58□□□□□ -0.24
SMN2-206ENST00000506734 LINC00518Q8N0U6 118 aa13.58□□□□□ -0.24
SMN2-206ENST00000506734 LINC00467Q9BRT7 94 aa13.58□□□□□ -0.24
SMN2-206ENST00000506734 SMIM6P0DI80 62 aa13.57□□□□□ -0.24
SMN2-206ENST00000506734 EVI2AP22794 236 aa13.57□□□□□ -0.24
SMN2-206ENST00000506734 VWFP04275 2813 aa13.57□□□□□ -0.24
SMN2-206ENST00000506734 M0R381 172 aa13.56□□□□□ -0.24
SMN2-206ENST00000506734 INSP01308 110 aa13.56□□□□□ -0.24
SMN2-206ENST00000506734 PRELID3AQ96N28 172 aa13.56□□□□□ -0.24
SMN2-206ENST00000506734 CKS2P33552 79 aa13.55□□□□□ -0.24
SMN2-206ENST00000506734 NUTF2P61970 127 aaKnown RBP13.55□□□□□ -0.24
SMN2-206ENST00000506734 NIT1Q86X76 327 aa13.55□□□□□ -0.24
SMN2-206ENST00000506734 SPATA3Q8NHX4 192 aa13.55□□□□□ -0.24
SMN2-206ENST00000506734 URB1-AS1Q96HZ7 61 aa13.55□□□□□ -0.24
SMN2-206ENST00000506734 LAMTOR2Q9Y2Q5 125 aa13.55□□□□□ -0.24
SMN2-206ENST00000506734 CHCHD1Q96BP2 118 aaKnown RBP13.54□□□□□ -0.24
SMN2-206ENST00000506734 AP1S3Q96PC3 154 aa13.54□□□□□ -0.24
SMN2-206ENST00000506734 MDFICQ9P1T7 246 aa13.54□□□□□ -0.24
SMN2-206ENST00000506734 MUC4Q99102 2169 aa13.54□□□□□ -0.24
SMN2-206ENST00000506734 CBY3A6NI87 242 aa13.54□□□□□ -0.24
SMN2-206ENST00000506734 SPRY2O43597 315 aa13.54□□□□□ -0.24
SMN2-206ENST00000506734 WFDC9Q8NEX5 89 aa13.54□□□□□ -0.24
SMN2-206ENST00000506734 MCRIP2Q9BUT9 160 aaKnown RBP13.54□□□□□ -0.24
SMN2-206ENST00000506734 ZNF747Q9BV97 191 aa13.54□□□□□ -0.24
SMN2-206ENST00000506734 SAMD10Q9BYL1 202 aa13.54□□□□□ -0.24
SMN2-206ENST00000506734 DPH3P1Q9H4G8 78 aa13.54□□□□□ -0.24
SMN2-206ENST00000506734 RNASEKQ6P5S7 137 aaKnown RBP13.53□□□□□ -0.24
SMN2-206ENST00000506734 LINC00614P0C842 121 aa13.52□□□□□ -0.25
SMN2-206ENST00000506734 WFDC10AQ9H1F0 79 aa13.52□□□□□ -0.25
SMN2-206ENST00000506734 SMKR1H3BMG3 65 aa13.51□□□□□ -0.25
SMN2-206ENST00000506734 HSBP1O75506 76 aa13.51□□□□□ -0.25
SMN2-206ENST00000506734 NCR2O95944 276 aa13.51□□□□□ -0.25
SMN2-206ENST00000506734 NPYP01303 97 aa13.51□□□□□ -0.25
SMN2-206ENST00000506734 AMTP48728 403 aa13.51□□□□□ -0.25
SMN2-206ENST00000506734 PYY3Q5JQD4 70 aa13.51□□□□□ -0.25
SMN2-206ENST00000506734 PRIMA1Q86XR5 153 aa13.51□□□□□ -0.25
SMN2-206ENST00000506734 SYT8Q8NBV8 401 aa13.51□□□□□ -0.25
SMN2-206ENST00000506734 MRAP2Q96G30 205 aa13.51□□□□□ -0.25
SMN2-206ENST00000506734 C12orf57Q99622 126 aa13.51□□□□□ -0.25
SMN2-206ENST00000506734 XCL2Q9UBD3 114 aa13.51□□□□□ -0.25
SMN2-206ENST00000506734 POM121L12Q8N7R1 296 aa13.5□□□□□ -0.25
SMN2-206ENST00000506734 MAST4O15021 2626 aa13.5□□□□□ -0.25
SMN2-206ENST00000506734 WIPF1O43516 503 aa13.49□□□□□ -0.25
SMN2-206ENST00000506734 PMCHP20382 165 aa13.49□□□□□ -0.25
SMN2-206ENST00000506734 MORN3Q6PF18 240 aaPredicted RBP13.49□□□□□ -0.25
SMN2-206ENST00000506734 C14orf178Q8N769 122 aaPredicted RBP13.49□□□□□ -0.25
SMN2-206ENST00000506734 LINC01587Q99440 93 aa13.49□□□□□ -0.25
SMN2-206ENST00000506734 GSN-AS1Q9NRJ2 163 aa13.49□□□□□ -0.25
SMN2-206ENST00000506734 KIF25-AS1Q9Y6Z4 181 aa13.49□□□□□ -0.25
SMN2-206ENST00000506734 GTSCR1Q86UQ5 136 aa13.49□□□□□ -0.25
SMN2-206ENST00000506734 C1orf158Q8N1D5 194 aa13.49□□□□□ -0.25
SMN2-206ENST00000506734 GAS8-AS1O95177 125 aa13.48□□□□□ -0.25
SMN2-206ENST00000506734 TNFRSF6BO95407 300 aa13.48□□□□□ -0.25
SMN2-206ENST00000506734 GIG44P09565 113 aaPredicted RBP13.48□□□□□ -0.25
SMN2-206ENST00000506734 ZNF415Q09FC8 603 aa13.48□□□□□ -0.25
SMN2-206ENST00000506734 JOSD1Q15040 202 aaPredicted RBP13.48□□□□□ -0.25
SMN2-206ENST00000506734 Q6ZWC4 215 aa13.48□□□□□ -0.25
SMN2-206ENST00000506734 FAM19A2Q8N3H0 131 aa13.48□□□□□ -0.25
SMN2-206ENST00000506734 DEFB125Q8N687 156 aa13.48□□□□□ -0.25
SMN2-206ENST00000506734 PRSS3P2Q8NHM4 247 aa13.48□□□□□ -0.25
SMN2-206ENST00000506734 PTH2Q96A98 100 aa13.48□□□□□ -0.25
SMN2-206ENST00000506734 PRSS47A8MTI9 375 aa13.47□□□□□ -0.25
SMN2-206ENST00000506734 LINC00315P59091 139 aa13.47□□□□□ -0.25
SMN2-206ENST00000506734 PIK3CD-AS1Q5SR53 167 aa13.47□□□□□ -0.25
SMN2-206ENST00000506734 FA2HQ7L5A8 372 aa13.47□□□□□ -0.25
SMN2-206ENST00000506734 NRACQ8N912 160 aa13.47□□□□□ -0.25
SMN2-206ENST00000506734 MAP1LC3AQ9H492 121 aa13.47□□□□□ -0.25
SMN2-206ENST00000506734 NOTCH3Q9UM47 2321 aa13.47□□□□□ -0.25
SMN2-206ENST00000506734 FBN1P35555 2871 aaKnown RBP13.46□□□□□ -0.25
SMN2-206ENST00000506734 SMIM17P0DL12 118 aa13.46□□□□□ -0.25
SMN2-206ENST00000506734 HTN1P15515 57 aa13.46□□□□□ -0.25
SMN2-206ENST00000506734 IFI27P40305 119 aaPredicted RBP13.46□□□□□ -0.25
SMN2-206ENST00000506734 C11orf72Q8NBR9 251 aa13.46□□□□□ -0.25
SMN2-206ENST00000506734 C1QTNF4Q9BXJ3 329 aa13.46□□□□□ -0.25
SMN2-206ENST00000506734 AP5S1Q9NUS5 200 aa13.46□□□□□ -0.25
SMN2-206ENST00000506734 TRRAPQ9Y4A5 3859 aa13.46□□□□□ -0.25
SMN2-206ENST00000506734 TRAV26-2A0A0B4J265 109 aa13.45□□□□□ -0.26
SMN2-206ENST00000506734 IGHV1-24A0A0C4DH33 117 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms