RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 TMEM91Q6ZNR0 172 aa0.41□□□□□ -2.34
GYPB-207ENST00000506679 Q86TA4 180 aa0.41□□□□□ -2.34
GYPB-207ENST00000506679 VPS25Q9BRG1 176 aa0.41□□□□□ -2.34
GYPB-207ENST00000506679 BATF3Q9NR55 127 aa0.41□□□□□ -2.34
GYPB-207ENST00000506679 MRPL36Q9P0J6 103 aaKnown RBP0.41□□□□□ -2.34
GYPB-207ENST00000506679 HIGD1AQ9Y241 93 aa0.41□□□□□ -2.34
GYPB-207ENST00000506679 UHRF1BP1LA0JNW5 1464 aa0.41□□□□□ -2.34
GYPB-207ENST00000506679 DNHD1Q96M86 4753 aa0.41□□□□□ -2.34
GYPB-207ENST00000506679 MUC12Q9UKN1 5478 aa0.41□□□□□ -2.34
GYPB-207ENST00000506679 FLNAP21333 2647 aaKnown RBP0.4□□□□□ -2.34
GYPB-207ENST00000506679 ARHGAP31Q2M1Z3 1444 aa0.4□□□□□ -2.34
GYPB-207ENST00000506679 NAV3Q8IVL0 2385 aa0.4□□□□□ -2.34
GYPB-207ENST00000506679 VCANP13611 3396 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 RBP4P02753 201 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 HLA-DRB4P13762 266 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 ADCYAP1P18509 176 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 KDELR1P24390 212 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 SPINK13Q1W4C9 94 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 TMEM244Q5VVB8 128 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 SPATA8Q6RVD6 105 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 UNQ5815/PRO19632Q6UWF5 114 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 LYPD5Q6UWN5 251 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 PPDPFLQ8WWR9 84 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 ANP32BQ92688 251 aaKnown RBP0.4□□□□□ -2.35
GYPB-207ENST00000506679 SLC35B3Q9H1N7 401 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 ATG5Q9H1Y0 275 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 BANF2Q9H503 90 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 TAS2R8Q9NYW2 309 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 HLA-DRB4X5D2U9 266 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 CEP350Q5VT06 3117 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 NBEAL2Q6ZNJ1 2754 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 FAM208BQ5VWN6 2430 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 FASNP49327 2511 aaKnown RBP0.4□□□□□ -2.35
GYPB-207ENST00000506679 IGSF10Q6WRI0 2623 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 A0A0C4DFX4 3053 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 KDM5CP41229 1560 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 MAP1BP46821 2468 aaKnown RBP0.4□□□□□ -2.35
GYPB-207ENST00000506679 USH2AO75445 5202 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 DLEC1Q9Y238 1755 aa0.4□□□□□ -2.35
GYPB-207ENST00000506679 PLXNA2O75051 1894 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 ACACBO00763 2458 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 CDC42EP2O14613 210 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 MT-ND4LP03901 98 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 KRTAP2-3P0C7H8 128 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 SPINT3P49223 89 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 AKR1D1P51857 326 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 POLR2JP52435 117 aaKnown RBP0.39□□□□□ -2.35
GYPB-207ENST00000506679 ZNF137PP52743 207 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 KRTAP19-3Q7Z4W3 81 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 MMGT1Q8N4V1 131 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 PPP1R1CQ8WVI7 109 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 PLAC4Q8WY50 150 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 KRTAP2-4Q9BYR9 128 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 C10orf95Q9H7T3 257 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 COMMD3Q9UBI1 195 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 DNAJC15Q9Y5T4 150 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 CSMD1Q96PZ7 3565 aa0.39□□□□□ -2.35
GYPB-207ENST00000506679 CCDC171Q6TFL3 1326 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 KALRNO60229 2985 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 CDK5RAP2Q96SN8 1893 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 CDK12Q9NYV4 1490 aaPredicted RBP0.38□□□□□ -2.35
GYPB-207ENST00000506679 A0A0D9SG42 100 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 TRBV10-1A0A0K0K1A3 114 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 TEX49A0A1B0GTD5 131 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 A0A1B0GW64 132 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 APOC1P02654 83 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 CD3DP04234 171 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 IL7P13232 177 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 FXYD3Q14802 87 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 ALX1Q15699 326 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 GLYATL3Q5SZD4 288 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 SLC25A26Q70HW3 274 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 NDUFA11Q86Y39 141 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 ATP6V0E2Q8NHE4 81 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 LZICQ8WZA0 190 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 GSKIPQ9P0R6 139 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 LRP5O75197 1615 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 SZT2Q5T011 3432 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 OVOS2A0A0J9YW53 1432 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 OVOS2Q6IE36 1432 aa0.38□□□□□ -2.35
GYPB-207ENST00000506679 BDP1A6H8Y1 2624 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 RREB1Q92766 1687 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 ITPR1Q14643 2758 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 STAB2Q8WWQ8 2551 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 MYH13Q9UKX3 1938 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 C2CD3Q4AC94 2353 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 NBDYA0A0U1RRE5 68 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 LOC101927531A0A1B0GV80 90 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 IGKCP01834 107 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 CCKP06307 115 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 NCS1P62166 190 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 KLKP1Q107X0 134 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 C6orf52Q5T4I8 152 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 ATP11AUNQ6ZP68 121 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 C5orf56Q8N8D9 126 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 LINC00208Q96KT6 92 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 NOP16Q9Y3C1 178 aaKnown RBP0.37□□□□□ -2.35
GYPB-207ENST00000506679 CEP152O94986 1710 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 DISP2A7MBM2 1401 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 BLMP54132 1417 aaPredicted RBP0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms