RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 TEX46H3BTG2 121 aa12.32□□□□□ -0.44
SMN1-204ENST00000506163 RS1O15537 224 aa12.32□□□□□ -0.44
SMN1-204ENST00000506163 BCL2P10415 239 aa12.32□□□□□ -0.44
SMN1-204ENST00000506163 CCL18P55774 89 aa12.32□□□□□ -0.44
SMN1-204ENST00000506163 LINC01559Q495D7 138 aa12.32□□□□□ -0.44
SMN1-204ENST00000506163 DNLZQ5SXM8 178 aa12.32□□□□□ -0.44
SMN1-204ENST00000506163 CFAP126Q5VTH2 177 aa12.32□□□□□ -0.44
SMN1-204ENST00000506163 PTH2Q96A98 100 aa12.32□□□□□ -0.44
SMN1-204ENST00000506163 TMSB15BA0A087X1C1 80 aa12.31□□□□□ -0.44
SMN1-204ENST00000506163 IGLV2-8P01709 118 aa12.31□□□□□ -0.44
SMN1-204ENST00000506163 MEF2BQ02080 365 aaPredicted RBP12.31□□□□□ -0.44
SMN1-204ENST00000506163 SLAQ13239 276 aa12.31□□□□□ -0.44
SMN1-204ENST00000506163 LYPD6BQ8NI32 183 aa12.31□□□□□ -0.44
SMN1-204ENST00000506163 TXNDC17Q9BRA2 123 aa12.31□□□□□ -0.44
SMN1-204ENST00000506163 RAB19A4D1S5 217 aa12.3□□□□□ -0.44
SMN1-204ENST00000506163 H3BVH4 76 aa12.3□□□□□ -0.44
SMN1-204ENST00000506163 S100A4P26447 101 aaKnown RBP12.3□□□□□ -0.44
SMN1-204ENST00000506163 ASIPP42127 132 aa12.3□□□□□ -0.44
SMN1-204ENST00000506163 FAM3BP58499 235 aaPredicted RBP12.3□□□□□ -0.44
SMN1-204ENST00000506163 RPL19P84098 196 aaKnown RBP12.3□□□□□ -0.44
SMN1-204ENST00000506163 JPT2Q9H910 190 aa12.3□□□□□ -0.44
SMN1-204ENST00000506163 IL36BQ9NZH7 164 aa12.3□□□□□ -0.44
SMN1-204ENST00000506163 LOC100131303A0A0U1RQF7 123 aa12.29□□□□□ -0.44
SMN1-204ENST00000506163 ARMS2P0C7Q2 107 aa12.29□□□□□ -0.44
SMN1-204ENST00000506163 GATA1P15976 413 aaPredicted RBP12.29□□□□□ -0.44
SMN1-204ENST00000506163 DMRTA1Q5VZB9 504 aa12.29□□□□□ -0.44
SMN1-204ENST00000506163 SCRT2Q9NQ03 307 aa12.29□□□□□ -0.44
SMN1-204ENST00000506163 VAX2Q9UIW0 290 aa12.29□□□□□ -0.44
SMN1-204ENST00000506163 FAT2Q9NYQ8 4349 aa12.29□□□□□ -0.44
SMN1-204ENST00000506163 TRBV20OR9-2A0A075B6H5 130 aa12.28□□□□□ -0.44
SMN1-204ENST00000506163 IGHV3-73A0A0B4J1V6 119 aa12.28□□□□□ -0.44
SMN1-204ENST00000506163 K7EQD1 137 aa12.28□□□□□ -0.44
SMN1-204ENST00000506163 BLOC1S1P78537 153 aa12.28□□□□□ -0.44
SMN1-204ENST00000506163 CENPWQ5EE01 88 aa12.28□□□□□ -0.44
SMN1-204ENST00000506163 Q6ZSN1 163 aa12.28□□□□□ -0.44
SMN1-204ENST00000506163 ICOSQ9Y6W8 199 aa12.28□□□□□ -0.44
SMN1-204ENST00000506163 BIRC6Q9NR09 4857 aa12.28□□□□□ -0.44
SMN1-204ENST00000506163 PDE6DO43924 150 aa12.28□□□□□ -0.44
SMN1-204ENST00000506163 IFNA1P01562 189 aa12.28□□□□□ -0.44
SMN1-204ENST00000506163 GYPEP15421 78 aa12.28□□□□□ -0.44
SMN1-204ENST00000506163 SAMD10Q9BYL1 202 aa12.28□□□□□ -0.44
SMN1-204ENST00000506163 MED9Q9NWA0 146 aa12.28□□□□□ -0.44
SMN1-204ENST00000506163 RTL8CO15255 209 aa12.27□□□□□ -0.45
SMN1-204ENST00000506163 PRR27Q6MZM9 219 aa12.27□□□□□ -0.45
SMN1-204ENST00000506163 UFSP1Q6NVU6 142 aa12.27□□□□□ -0.45
SMN1-204ENST00000506163 MRPS16Q9Y3D3 137 aaKnown RBP12.27□□□□□ -0.45
SMN1-204ENST00000506163 MRPL23Q16540 153 aaKnown RBP12.26□□□□□ -0.45
SMN1-204ENST00000506163 LYPD5Q6UWN5 251 aa12.26□□□□□ -0.45
SMN1-204ENST00000506163 SLC25A29Q8N8R3 303 aa12.26□□□□□ -0.45
SMN1-204ENST00000506163 UPK3BQ9BT76 320 aa12.26□□□□□ -0.45
SMN1-204ENST00000506163 PARLQ9H300 379 aa12.26□□□□□ -0.45
SMN1-204ENST00000506163 Q9H8V8 135 aa12.26□□□□□ -0.45
SMN1-204ENST00000506163 NBDYA0A0U1RRE5 68 aa12.25□□□□□ -0.45
SMN1-204ENST00000506163 PIK3CD-AS1Q5SR53 167 aa12.25□□□□□ -0.45
SMN1-204ENST00000506163 KRTAP1-5Q9BYS1 174 aa12.25□□□□□ -0.45
SMN1-204ENST00000506163 Q9UF83 564 aa12.24□□□□□ -0.45
SMN1-204ENST00000506163 HECTD4Q9Y4D8 3996 aa12.23□□□□□ -0.45
SMN1-204ENST00000506163 C19orf71A6NCJ1 209 aa12.23□□□□□ -0.45
SMN1-204ENST00000506163 RBFOX3A6NFN3 312 aa12.23□□□□□ -0.45
SMN1-204ENST00000506163 TAGLN2P37802 199 aaKnown RBP12.23□□□□□ -0.45
SMN1-204ENST00000506163 GNG4P50150 75 aa12.23□□□□□ -0.45
SMN1-204ENST00000506163 NEGR1Q7Z3B1 354 aa12.23□□□□□ -0.45
SMN1-204ENST00000506163 A8MWV9 139 aa12.22□□□□□ -0.45
SMN1-204ENST00000506163 MGST1P10620 155 aaKnown RBP12.22□□□□□ -0.45
SMN1-204ENST00000506163 PCNPQ8WW12 178 aaKnown RBP12.22□□□□□ -0.45
SMN1-204ENST00000506163 SSBP4Q9BWG4 385 aaPredicted RBP12.22□□□□□ -0.45
SMN1-204ENST00000506163 PHLDA3Q9Y5J5 127 aa12.22□□□□□ -0.45
SMN1-204ENST00000506163 MUC21A0A0G2JKD1 596 aa12.21□□□□□ -0.45
SMN1-204ENST00000506163 MUC21A0A140T8X8 626 aa12.21□□□□□ -0.45
SMN1-204ENST00000506163 TRBV6-4A0A1B0GX49 114 aa12.21□□□□□ -0.45
SMN1-204ENST00000506163 M0R381 172 aa12.21□□□□□ -0.45
SMN1-204ENST00000506163 CIDEAO60543 219 aa12.21□□□□□ -0.45
SMN1-204ENST00000506163 CRYGDP07320 174 aa12.21□□□□□ -0.45
SMN1-204ENST00000506163 CXCL1P09341 107 aa12.21□□□□□ -0.45
SMN1-204ENST00000506163 SRIP30626 198 aa12.21□□□□□ -0.45
SMN1-204ENST00000506163 ZFP2Q6ZN57 461 aa12.21□□□□□ -0.45
SMN1-204ENST00000506163 OR10AG1Q8NH19 301 aa12.21□□□□□ -0.45
SMN1-204ENST00000506163 SFRP2Q96HF1 295 aa12.21□□□□□ -0.45
SMN1-204ENST00000506163 SNAI2O43623 268 aa12.2□□□□□ -0.46
SMN1-204ENST00000506163 NXPH4O95158 308 aa12.2□□□□□ -0.46
SMN1-204ENST00000506163 GZMBP10144 247 aa12.2□□□□□ -0.46
SMN1-204ENST00000506163 A0A087WWL8 130 aa12.2□□□□□ -0.46
SMN1-204ENST00000506163 K7EN84 100 aa12.2□□□□□ -0.46
SMN1-204ENST00000506163 MED14OSP0DP75 135 aa12.2□□□□□ -0.46
SMN1-204ENST00000506163 C14orf178Q8N769 122 aaPredicted RBP12.2□□□□□ -0.46
SMN1-204ENST00000506163 SYT8Q8NBV8 401 aa12.2□□□□□ -0.46
SMN1-204ENST00000506163 OCC1Q8TAD7 63 aa12.2□□□□□ -0.46
SMN1-204ENST00000506163 SMIM12Q96EX1 92 aa12.2□□□□□ -0.46
SMN1-204ENST00000506163 RHOHQ15669 191 aa12.19□□□□□ -0.46
SMN1-204ENST00000506163 TOR2AQ5JU69 321 aa12.19□□□□□ -0.46
SMN1-204ENST00000506163 C1orf134Q5TEV5 83 aa12.19□□□□□ -0.46
SMN1-204ENST00000506163 TEX261Q6UWH6 196 aa12.19□□□□□ -0.46
SMN1-204ENST00000506163 ZFP82Q8N141 532 aa12.19□□□□□ -0.46
SMN1-204ENST00000506163 TMEM250H0YL14 139 aa12.18□□□□□ -0.46
SMN1-204ENST00000506163 OR5AL1P0C617 328 aa12.18□□□□□ -0.46
SMN1-204ENST00000506163 OR2D3Q8NGH3 330 aa12.18□□□□□ -0.46
SMN1-204ENST00000506163 FAM210AQ96ND0 272 aa12.18□□□□□ -0.46
SMN1-204ENST00000506163 PRADC1Q9BSG0 188 aa12.18□□□□□ -0.46
SMN1-204ENST00000506163 A0A1B0GVY2 172 aa12.17□□□□□ -0.46
SMN1-204ENST00000506163 IGLC6P0CF74 106 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms