RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 WFDC10AQ9H1F0 79 aa5.3□□□□□ -1.56
NUP54-204ENST00000506098 RBMY1BA6NDE4 496 aaKnown RBP5.29□□□□□ -1.56
NUP54-204ENST00000506098 RBMY1EA6NEQ0 496 aaKnown RBP5.29□□□□□ -1.56
NUP54-204ENST00000506098 ZNF727A8MUV8 499 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 KLLNB2CW77 178 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 J3QR89 54 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 RBMY1DP0C7P1 496 aaKnown RBP5.29□□□□□ -1.56
NUP54-204ENST00000506098 PRB4P10163 310 aaPredicted RBP5.29□□□□□ -1.56
NUP54-204ENST00000506098 LEPP41159 167 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 GAGE5Q13069 117 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 GAGE6Q13070 117 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 CENPWQ5EE01 88 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 PRNTQ86SH4 94 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 BAGE2Q86Y30 109 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 ZFAND2AQ8N6M9 145 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 OCC1Q8TAD7 63 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 MRAPQ8TCY5 172 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 SGK494Q96LW2 274 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 SMIM7Q9BQ49 75 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 NDFIP1Q9BT67 221 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 SRD5A3Q9H8P0 318 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 SDF2L1Q9HCN8 221 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 UQCR10Q9UDW1 63 aa5.29□□□□□ -1.56
NUP54-204ENST00000506098 CRXO43186 299 aaPredicted RBP5.28□□□□□ -1.56
NUP54-204ENST00000506098 TRGC1P0CF51 173 aa5.28□□□□□ -1.56
NUP54-204ENST00000506098 IGHV4-30-4P0DP06 118 aa5.28□□□□□ -1.56
NUP54-204ENST00000506098 TSPOP30536 169 aa5.28□□□□□ -1.56
NUP54-204ENST00000506098 GNG4P50150 75 aa5.28□□□□□ -1.56
NUP54-204ENST00000506098 RPL32P62910 135 aaKnown RBP5.28□□□□□ -1.56
NUP54-204ENST00000506098 Q6AWC8 147 aa5.28□□□□□ -1.56
NUP54-204ENST00000506098 MORN3Q6PF18 240 aaPredicted RBP5.28□□□□□ -1.56
NUP54-204ENST00000506098 BOD1L2Q8IYS8 172 aa5.28□□□□□ -1.56
NUP54-204ENST00000506098 KIR2DL5BQ8NHK3 375 aa5.28□□□□□ -1.56
NUP54-204ENST00000506098 Q8TAT8 98 aa5.28□□□□□ -1.56
NUP54-204ENST00000506098 C8orf49Q96NF6 230 aa5.28□□□□□ -1.56
NUP54-204ENST00000506098 LAMTOR2Q9Y2Q5 125 aa5.28□□□□□ -1.56
NUP54-204ENST00000506098 LOC102724200A0A096LPH7 203 aaPredicted RBP5.27□□□□□ -1.57
NUP54-204ENST00000506098 K7EN84 100 aa5.27□□□□□ -1.57
NUP54-204ENST00000506098 ZNF324O75467 553 aaPredicted RBP5.27□□□□□ -1.57
NUP54-204ENST00000506098 IGKV3-20P01619 116 aa5.27□□□□□ -1.57
NUP54-204ENST00000506098 GPX1P07203 203 aa5.27□□□□□ -1.57
NUP54-204ENST00000506098 GIG44P09565 113 aaPredicted RBP5.27□□□□□ -1.57
NUP54-204ENST00000506098 CRIP1P50238 77 aa5.27□□□□□ -1.57
NUP54-204ENST00000506098 RPL23P62829 140 aaKnown RBP5.27□□□□□ -1.57
NUP54-204ENST00000506098 PNRC1Q12796 327 aaPredicted RBP5.27□□□□□ -1.57
NUP54-204ENST00000506098 ELOBQ15370 118 aa5.27□□□□□ -1.57
NUP54-204ENST00000506098 PRR9Q5T870 116 aa5.27□□□□□ -1.57
NUP54-204ENST00000506098 ZC2HC1AQ96GY0 325 aa5.27□□□□□ -1.57
NUP54-204ENST00000506098 ASCL2Q99929 193 aa5.27□□□□□ -1.57
NUP54-204ENST00000506098 NIPSNAP3BQ9BS92 247 aa5.27□□□□□ -1.57
NUP54-204ENST00000506098 MRPL16Q9NX20 251 aaKnown RBP5.27□□□□□ -1.57
NUP54-204ENST00000506098 GAGE12BA1L429 117 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 C7orf71A4D174 169 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 TMEM189A5PLL7 270 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 C19orf71A6NCJ1 209 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 FABP5P3A8MUU1 101 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 K7EIL1 84 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 M0R2Z0 102 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 SNAI2O43623 268 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 AZU1P20160 251 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 ZNF80P51504 273 aaPredicted RBP5.26□□□□□ -1.57
NUP54-204ENST00000506098 KIR3DS1Q14943 382 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 SPINK13Q1W4C9 94 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 GFI1BQ5VTD9 330 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 FAM231DQ6ZW35 169 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 GTF2H5Q6ZYL4 71 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 FA2HQ7L5A8 372 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 FER1L6-AS1Q8NA97 138 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 CSNK1G2-AS1Q8NCQ2 148 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 SPATA25Q9BR10 227 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 C1QTNF4Q9BXJ3 329 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 CTDSP1Q9GZU7 261 aa5.26□□□□□ -1.57
NUP54-204ENST00000506098 DNHD1Q96M86 4753 aa5.25□□□□□ -1.57
NUP54-204ENST00000506098 TRAV21A0A0B4J279 112 aa5.25□□□□□ -1.57
NUP54-204ENST00000506098 SIVA1O15304 175 aa5.25□□□□□ -1.57
NUP54-204ENST00000506098 PFN1P07737 140 aaKnown RBP5.25□□□□□ -1.57
NUP54-204ENST00000506098 RPL35AP18077 110 aaKnown RBP5.25□□□□□ -1.57
NUP54-204ENST00000506098 RNASE4P34096 147 aaKnown RBP5.25□□□□□ -1.57
NUP54-204ENST00000506098 APOC4P55056 127 aa5.25□□□□□ -1.57
NUP54-204ENST00000506098 FXYD7P58549 80 aa5.25□□□□□ -1.57
NUP54-204ENST00000506098 FAM162BQ5T6X4 162 aa5.25□□□□□ -1.57
NUP54-204ENST00000506098 NEGR1Q7Z3B1 354 aa5.25□□□□□ -1.57
NUP54-204ENST00000506098 TMEM256Q8N2U0 113 aa5.25□□□□□ -1.57
NUP54-204ENST00000506098 LINC00467Q9BRT7 94 aa5.25□□□□□ -1.57
NUP54-204ENST00000506098 OSTCQ9NRP0 149 aa5.25□□□□□ -1.57
NUP54-204ENST00000506098 TRAV12-2A0A075B6T6 113 aa5.24□□□□□ -1.57
NUP54-204ENST00000506098 TRAV12-3A0A0B4J271 114 aa5.24□□□□□ -1.57
NUP54-204ENST00000506098 SH2D1AO60880 128 aa5.24□□□□□ -1.57
NUP54-204ENST00000506098 INSP01308 110 aa5.24□□□□□ -1.57
NUP54-204ENST00000506098 TRGC2P03986 189 aa5.24□□□□□ -1.57
NUP54-204ENST00000506098 FRMD6-AS1P0C7T7 363 aa5.24□□□□□ -1.57
NUP54-204ENST00000506098 RBMY1A1P0DJD3 496 aaKnown RBP5.24□□□□□ -1.57
NUP54-204ENST00000506098 RBMY1CP0DJD4 496 aa5.24□□□□□ -1.57
NUP54-204ENST00000506098 MGST1P10620 155 aaKnown RBP5.24□□□□□ -1.57
NUP54-204ENST00000506098 RPL24P83731 157 aaKnown RBP5.24□□□□□ -1.57
NUP54-204ENST00000506098 RBMY1FQ15415 496 aaKnown RBP5.24□□□□□ -1.57
NUP54-204ENST00000506098 ADIRFQ15847 76 aa5.24□□□□□ -1.57
NUP54-204ENST00000506098 TDRG1Q3Y452 100 aa5.24□□□□□ -1.57
NUP54-204ENST00000506098 IBA57Q5T440 356 aaKnown RBP5.24□□□□□ -1.57
NUP54-204ENST00000506098 MRPL54Q6P161 138 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms