RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 MT-ND6P03923 174 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 SNRPCP09234 159 aaKnown RBP3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 CBLN1P23435 193 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 ZNF138P52744 262 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 SYNJ2BPP57105 145 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 RPS20P60866 119 aaKnown RBP3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 PAFAH1B2P68402 229 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 TMEM78Q5T7P6 136 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 Q6AWC8 147 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 RASL11AQ6T310 242 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 TCF24Q7RTU0 167 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 ATP5L2Q7Z4Y8 100 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 PRNTQ86SH4 94 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 KLHL30-AS1Q8NEE0 82 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 OR9G4Q8NGQ1 327 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 TSKUQ8WUA8 353 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 LINC00477Q96M19 166 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 SMR3AQ99954 134 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 RPP21Q9H633 154 aaKnown RBP3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 SRD5A3Q9H8P0 318 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 F8P00451 2351 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 OTOGQ6ZRI0 2925 aa3.56□□□□□ -1.84
DEPDC1B-203ENST00000505017 FN1P02751 2386 aaKnown RBP3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 C2CD3Q4AC94 2353 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 HIVEP1P15822 2718 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 IGHV3OR16-13A0A075B7E8 117 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 IGHV3-49A0A0A0MS15 119 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 TRAV8-1A0A0A6YYK1 113 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 IGHV3-74A0A0B4J1X5 117 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 IGHV3-66A0A0C4DH42 116 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 A0A1B0GW15 77 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 A0A1W2PPQ1 181 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 CCL24O00175 119 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 CXCL1P09341 107 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 RPS10P46783 165 aaKnown RBP3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 FOXA3P55318 350 aaPredicted RBP3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 SNRPD3P62318 126 aaKnown RBP3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 HIST1H1AQ02539 215 aaPredicted RBP3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 OR5I1Q13606 314 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 SMUG1Q53HV7 270 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 FAM162BQ5T6X4 162 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 NDUFA11Q86Y39 141 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 ZNF738Q8NE65 137 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 OR11H1Q8NG94 326 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 OR2K2Q8NGT1 345 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 OR10J6PQ8NGY7 276 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 DCANP1Q8TF63 244 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 ODF3Q96PU9 254 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 RNASE7Q9H1E1 156 aaKnown RBP3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 NAT8BQ9UHF3 227 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 URGCP-MRPS24S4R325 110 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 ZFHX3Q15911 3703 aa3.55□□□□□ -1.84
DEPDC1B-203ENST00000505017 BAHCC1Q9P281 2608 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 IGKV2-40A0A087WW87 121 aaPredicted RBP3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 TGIF2-C20orf24A0A0A6YYL0 155 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 IZUMO1RA6ND01 250 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 FABP5P3A8MUU1 101 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 K7EQG2 157 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 DUSP14O95147 198 aaKnown RBP3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 IGKV2D-40P01614 121 aaPredicted RBP3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 S100A8P05109 93 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 CD28P10747 220 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 CRISP2P16562 243 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 CMC4P56277 68 aaPredicted RBP3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 PRR27Q6MZM9 219 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 RBPMS2Q6ZRY4 209 aaKnown RBP3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 APRG1Q8IVJ8 170 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 RNF182Q8N6D2 247 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 POM121L12Q8N7R1 296 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 NHLRC2Q8NBF2 726 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 OR8A1Q8NGG7 326 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 DYNLRB2Q8TF09 96 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 ZC2HC1AQ96GY0 325 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 SPAG8Q99932 426 aaPredicted RBP3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 CITED2Q99967 270 aaPredicted RBP3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 GNB1LQ9BYB4 327 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 MS4A6AQ9H2W1 248 aa3.54□□□□□ -1.84
DEPDC1B-203ENST00000505017 WNK1Q9H4A3 2382 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 SETD2Q9BYW2 2564 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 TMEM189A5PLL7 270 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 OR4C46A6NHA9 309 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 HIGD1CA8MV81 97 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 ZNF705FA8MVS1 300 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 SH2D1AO60880 128 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 HLA-DQA1P01909 254 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 CSN3P07498 182 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 HLA-DMBP28068 263 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 TSPOP30536 169 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 ZNF415Q09FC8 603 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 DEFB136Q30KP8 78 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 EBLN2Q6P2I7 272 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 FOXI2Q6ZQN5 318 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 NUP35Q8NFH5 326 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 OR2D3Q8NGH3 330 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 DLX4Q92988 240 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 BORCS7Q96B45 105 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 FAM19A4Q96LR4 140 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 AGPAT4-IT1Q9H0P7 198 aa3.53□□□□□ -1.84
DEPDC1B-203ENST00000505017 NF1P21359 2839 aa3.52□□□□□ -1.85
DEPDC1B-203ENST00000505017 SORL1Q92673 2214 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms