RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 DNAH10OSP0CZ25 163 aa8.12□□□□□ -1.11
MED28-203ENST00000503945 TIRAPP58753 221 aa8.12□□□□□ -1.11
MED28-203ENST00000503945 UBE2G2P60604 165 aa8.12□□□□□ -1.11
MED28-203ENST00000503945 ERVFC1-1P60608 527 aa8.12□□□□□ -1.11
MED28-203ENST00000503945 Q6ZRN7 208 aaPredicted RBP8.12□□□□□ -1.11
MED28-203ENST00000503945 WFDC10BQ8IUB3 73 aa8.12□□□□□ -1.11
MED28-203ENST00000503945 C10orf126Q8N4M7 172 aa8.12□□□□□ -1.11
MED28-203ENST00000503945 STOML3Q8TAV4 291 aa8.12□□□□□ -1.11
MED28-203ENST00000503945 HIST1H2BAQ96A08 127 aa8.12□□□□□ -1.11
MED28-203ENST00000503945 HERC1Q15751 4861 aa8.11□□□□□ -1.11
MED28-203ENST00000503945 IGHV3-38A0A0C4DH36 116 aa8.11□□□□□ -1.11
MED28-203ENST00000503945 ARPC5O15511 151 aa8.11□□□□□ -1.11
MED28-203ENST00000503945 MGST1P10620 155 aaKnown RBP8.11□□□□□ -1.11
MED28-203ENST00000503945 FGF8P55075 233 aaPredicted RBP8.11□□□□□ -1.11
MED28-203ENST00000503945 ZNF726P1Q15940 193 aa8.11□□□□□ -1.11
MED28-203ENST00000503945 C9orf85Q96MD7 179 aa8.11□□□□□ -1.11
MED28-203ENST00000503945 ZFP30Q9Y2G7 519 aa8.11□□□□□ -1.11
MED28-203ENST00000503945 ARL2-SNX15V9GYD0 113 aa8.11□□□□□ -1.11
MED28-203ENST00000503945 IGKV3D-20A0A0C4DH25 116 aa8.1□□□□□ -1.11
MED28-203ENST00000503945 FAM74A7A6NL05 159 aa8.1□□□□□ -1.11
MED28-203ENST00000503945 PEX7O00628 323 aa8.1□□□□□ -1.11
MED28-203ENST00000503945 RNASE3P12724 160 aaKnown RBP8.1□□□□□ -1.11
MED28-203ENST00000503945 RHOHQ15669 191 aa8.1□□□□□ -1.11
MED28-203ENST00000503945 LGALSLQ3ZCW2 172 aaPredicted RBP8.1□□□□□ -1.11
MED28-203ENST00000503945 OR10J3Q5JRS4 329 aa8.1□□□□□ -1.11
MED28-203ENST00000503945 ZNF506Q5JVG8 444 aa8.1□□□□□ -1.11
MED28-203ENST00000503945 DPPA3Q6W0C5 159 aa8.1□□□□□ -1.11
MED28-203ENST00000503945 A8MWV9 139 aa8.09□□□□□ -1.11
MED28-203ENST00000503945 FUSP35637 526 aaKnown RBP eCLIP8.09□□□□□ -1.11
MED28-203ENST00000503945 ASIPP42127 132 aa8.09□□□□□ -1.11
MED28-203ENST00000503945 PIK3CD-AS1Q5SR53 167 aa8.09□□□□□ -1.11
MED28-203ENST00000503945 CST9LP1Q5W188 147 aa8.09□□□□□ -1.11
MED28-203ENST00000503945 CDPF1Q6NVV7 123 aa8.09□□□□□ -1.11
MED28-203ENST00000503945 ZFP2Q6ZN57 461 aa8.09□□□□□ -1.11
MED28-203ENST00000503945 ATP6V0E2Q8NHE4 81 aa8.09□□□□□ -1.11
MED28-203ENST00000503945 CYTL1Q9NRR1 136 aa8.09□□□□□ -1.11
MED28-203ENST00000503945 A0A087WTM6 91 aa8.08□□□□□ -1.12
MED28-203ENST00000503945 MAP1LC3B2A6NCE7 125 aa8.08□□□□□ -1.12
MED28-203ENST00000503945 B4DEV8 164 aa8.08□□□□□ -1.12
MED28-203ENST00000503945 PSCAO43653 123 aa8.08□□□□□ -1.12
MED28-203ENST00000503945 UBE2G1P62253 170 aa8.08□□□□□ -1.12
MED28-203ENST00000503945 MAP1LC3BQ9GZQ8 125 aa8.08□□□□□ -1.12
MED28-203ENST00000503945 GTSF1LQ9H1H1 148 aa8.08□□□□□ -1.12
MED28-203ENST00000503945 FHITP49789 147 aa8.07□□□□□ -1.12
MED28-203ENST00000503945 CRIP1P50238 77 aa8.07□□□□□ -1.12
MED28-203ENST00000503945 LINC01556Q5JQF7 62 aa8.07□□□□□ -1.12
MED28-203ENST00000503945 FAM162BQ5T6X4 162 aa8.07□□□□□ -1.12
MED28-203ENST00000503945 LELP1Q5T871 98 aa8.07□□□□□ -1.12
MED28-203ENST00000503945 SYT8Q8NBV8 401 aa8.07□□□□□ -1.12
MED28-203ENST00000503945 FMC1Q96HJ9 113 aa8.07□□□□□ -1.12
MED28-203ENST00000503945 TCEAL7Q9BRU2 100 aa8.07□□□□□ -1.12
MED28-203ENST00000503945 IL36BQ9NZH7 164 aa8.07□□□□□ -1.12
MED28-203ENST00000503945 A0A0D9SG52 128 aa8.06□□□□□ -1.12
MED28-203ENST00000503945 IBA57-AS1B1ANH7 110 aa8.06□□□□□ -1.12
MED28-203ENST00000503945 KRBOX1C9JBD0 128 aa8.06□□□□□ -1.12
MED28-203ENST00000503945 G3V3Q6 166 aa8.06□□□□□ -1.12
MED28-203ENST00000503945 SMLR1H3BR10 107 aa8.06□□□□□ -1.12
MED28-203ENST00000503945 ARMS2P0C7Q2 107 aa8.06□□□□□ -1.12
MED28-203ENST00000503945 COX8CQ7Z4L0 72 aa8.06□□□□□ -1.12
MED28-203ENST00000503945 SFT2D1Q8WV19 159 aa8.06□□□□□ -1.12
MED28-203ENST00000503945 PARLQ9H300 379 aa8.06□□□□□ -1.12
MED28-203ENST00000503945 PHLDA3Q9Y5J5 127 aa8.06□□□□□ -1.12
MED28-203ENST00000503945 HMSDA8MTL9 139 aa8.05□□□□□ -1.12
MED28-203ENST00000503945 EPM2AB3EWF7 344 aa8.05□□□□□ -1.12
MED28-203ENST00000503945 UMAD1C9J7I0 102 aa8.05□□□□□ -1.12
MED28-203ENST00000503945 M0R036 132 aa8.05□□□□□ -1.12
MED28-203ENST00000503945 IGHV3-30P01768 117 aa8.05□□□□□ -1.12
MED28-203ENST00000503945 IGHV3-33P01772 117 aa8.05□□□□□ -1.12
MED28-203ENST00000503945 S100A9P06702 114 aaKnown RBP8.05□□□□□ -1.12
MED28-203ENST00000503945 SEC11BP0C7V7 166 aa8.05□□□□□ -1.12
MED28-203ENST00000503945 IGHV3-30-3P0DP02 117 aa8.05□□□□□ -1.12
MED28-203ENST00000503945 IGHV3-30-5P0DP03 117 aa8.05□□□□□ -1.12
MED28-203ENST00000503945 DNLZQ5SXM8 178 aa8.05□□□□□ -1.12
MED28-203ENST00000503945 Q6ZSN1 163 aa8.05□□□□□ -1.12
MED28-203ENST00000503945 Q86TA4 180 aa8.05□□□□□ -1.12
MED28-203ENST00000503945 KCNRGQ8N5I3 272 aa8.05□□□□□ -1.12
MED28-203ENST00000503945 ZC2HC1AQ96GY0 325 aa8.05□□□□□ -1.12
MED28-203ENST00000503945 FAT1Q14517 4588 aa8.05□□□□□ -1.12
MED28-203ENST00000503945 TRBV6-1A0A0K0K1D8 114 aa8.04□□□□□ -1.12
MED28-203ENST00000503945 GRIFINA4D1Z8 144 aa8.04□□□□□ -1.12
MED28-203ENST00000503945 GAGE12JA6NER3 117 aa8.04□□□□□ -1.12
MED28-203ENST00000503945 H3BVH4 76 aa8.04□□□□□ -1.12
MED28-203ENST00000503945 PAGE4O60829 102 aa8.04□□□□□ -1.12
MED28-203ENST00000503945 SH2D1AO60880 128 aa8.04□□□□□ -1.12
MED28-203ENST00000503945 EIF5AP63241 154 aaKnown RBP8.04□□□□□ -1.12
MED28-203ENST00000503945 GAGE1Q13065 139 aa8.04□□□□□ -1.12
MED28-203ENST00000503945 GAGE4Q13068 117 aa8.04□□□□□ -1.12
MED28-203ENST00000503945 GAGE5Q13069 117 aa8.04□□□□□ -1.12
MED28-203ENST00000503945 ZNF345Q14585 488 aa8.04□□□□□ -1.12
MED28-203ENST00000503945 ZNF674Q2M3X9 581 aa8.04□□□□□ -1.12
MED28-203ENST00000503945 GAGE13Q4V321 117 aa8.04□□□□□ -1.12
MED28-203ENST00000503945 OR11H4Q8NGC9 324 aa8.04□□□□□ -1.12
MED28-203ENST00000503945 MBD3L1Q8WWY6 194 aa8.04□□□□□ -1.12
MED28-203ENST00000503945 SAMD10Q9BYL1 202 aa8.04□□□□□ -1.12
MED28-203ENST00000503945 A0A087WWC5 75 aa8.03□□□□□ -1.12
MED28-203ENST00000503945 KANTRA0A1W2PQU2 76 aa8.03□□□□□ -1.12
MED28-203ENST00000503945 RHODO00212 210 aa8.03□□□□□ -1.12
MED28-203ENST00000503945 LTAP01374 205 aa8.03□□□□□ -1.12
MED28-203ENST00000503945 INAFM2P0DMQ5 153 aa8.03□□□□□ -1.12
MED28-203ENST00000503945 TPT1P13693 172 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms