RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 FAM74A3Q4VXF1 159 aa7.84□□□□□ -1.15
VCAN-205ENST00000503923 ZNF575Q86XF7 245 aa7.84□□□□□ -1.15
VCAN-205ENST00000503923 APLNQ9ULZ1 77 aa7.84□□□□□ -1.15
VCAN-205ENST00000503923 MUC4Q99102 2169 aa7.84□□□□□ -1.15
VCAN-205ENST00000503923 TRAV4A0A0B4J268 109 aa7.83□□□□□ -1.16
VCAN-205ENST00000503923 C9JQL5 133 aa7.83□□□□□ -1.16
VCAN-205ENST00000503923 K7EN84 100 aa7.83□□□□□ -1.16
VCAN-205ENST00000503923 IGHV3-53P01767 116 aa7.83□□□□□ -1.16
VCAN-205ENST00000503923 HOXA5P20719 270 aa7.83□□□□□ -1.16
VCAN-205ENST00000503923 RPS20P60866 119 aaKnown RBP7.83□□□□□ -1.16
VCAN-205ENST00000503923 PIK3CD-AS1Q5SR53 167 aa7.83□□□□□ -1.16
VCAN-205ENST00000503923 TMEM88Q6PEY1 159 aa7.83□□□□□ -1.16
VCAN-205ENST00000503923 SYT8Q8NBV8 401 aa7.83□□□□□ -1.16
VCAN-205ENST00000503923 OR4C5Q8NGB2 326 aa7.83□□□□□ -1.16
VCAN-205ENST00000503923 OR2D3Q8NGH3 330 aa7.83□□□□□ -1.16
VCAN-205ENST00000503923 PHLDA3Q9Y5J5 127 aa7.83□□□□□ -1.16
VCAN-205ENST00000503923 XKRY2A2RUG3 117 aa7.82□□□□□ -1.16
VCAN-205ENST00000503923 LCE2DQ5TA82 110 aaPredicted RBP7.82□□□□□ -1.16
VCAN-205ENST00000503923 C15orf53Q8NAA6 179 aa7.82□□□□□ -1.16
VCAN-205ENST00000503923 NUDT10Q8NFP7 164 aa7.82□□□□□ -1.16
VCAN-205ENST00000503923 NUDT11Q96G61 164 aa7.82□□□□□ -1.16
VCAN-205ENST00000503923 SCRT2Q9NQ03 307 aa7.82□□□□□ -1.16
VCAN-205ENST00000503923 KMT2CQ8NEZ4 4911 aaKnown RBP7.81□□□□□ -1.16
VCAN-205ENST00000503923 TRAV26-1A0A087WT03 109 aa7.81□□□□□ -1.16
VCAN-205ENST00000503923 TRGV4A0A0C4DH28 118 aa7.81□□□□□ -1.16
VCAN-205ENST00000503923 A8MWV9 139 aa7.81□□□□□ -1.16
VCAN-205ENST00000503923 RS1O15537 224 aa7.81□□□□□ -1.16
VCAN-205ENST00000503923 SNAI2O43623 268 aa7.81□□□□□ -1.16
VCAN-205ENST00000503923 CIDEAO60543 219 aa7.81□□□□□ -1.16
VCAN-205ENST00000503923 SFTA3P0C7M3 94 aa7.81□□□□□ -1.16
VCAN-205ENST00000503923 SLAQ13239 276 aa7.81□□□□□ -1.16
VCAN-205ENST00000503923 TMEM241Q24JQ0 296 aa7.81□□□□□ -1.16
VCAN-205ENST00000503923 SOHLH1Q5JUK2 328 aa7.81□□□□□ -1.16
VCAN-205ENST00000503923 FAM231DQ6ZW35 169 aa7.81□□□□□ -1.16
VCAN-205ENST00000503923 LINC01551Q86U37 167 aa7.81□□□□□ -1.16
VCAN-205ENST00000503923 ZFP82Q8N141 532 aa7.81□□□□□ -1.16
VCAN-205ENST00000503923 POM121L12Q8N7R1 296 aa7.81□□□□□ -1.16
VCAN-205ENST00000503923 ZNF479Q96JC4 524 aa7.81□□□□□ -1.16
VCAN-205ENST00000503923 SSBP4Q9BWG4 385 aaPredicted RBP7.81□□□□□ -1.16
VCAN-205ENST00000503923 RNASE7Q9H1E1 156 aaKnown RBP7.81□□□□□ -1.16
VCAN-205ENST00000503923 RPP21Q9H633 154 aaKnown RBP7.81□□□□□ -1.16
VCAN-205ENST00000503923 ALMS1Q8TCU4 4167 aa7.81□□□□□ -1.16
VCAN-205ENST00000503923 H3BNG1 76 aa7.8□□□□□ -1.16
VCAN-205ENST00000503923 OR5AL1P0C617 328 aa7.8□□□□□ -1.16
VCAN-205ENST00000503923 ERVFC1-1P60608 527 aa7.8□□□□□ -1.16
VCAN-205ENST00000503923 FHL2Q14192 279 aa7.8□□□□□ -1.16
VCAN-205ENST00000503923 CFAP126Q5VTH2 177 aa7.8□□□□□ -1.16
VCAN-205ENST00000503923 DMRTA1Q5VZB9 504 aa7.8□□□□□ -1.16
VCAN-205ENST00000503923 NAT8Q9UHE5 227 aa7.8□□□□□ -1.16
VCAN-205ENST00000503923 PRO0255Q9UI72 69 aa7.8□□□□□ -1.16
VCAN-205ENST00000503923 LYSTQ99698 3801 aa7.8□□□□□ -1.16
VCAN-205ENST00000503923 SACSQ9NZJ4 4579 aa7.79□□□□□ -1.16
VCAN-205ENST00000503923 DNAH1Q9P2D7 4330 aa7.79□□□□□ -1.16
VCAN-205ENST00000503923 A0A0J9YY99 117 aa7.79□□□□□ -1.16
VCAN-205ENST00000503923 LCE6AA0A183 80 aa7.79□□□□□ -1.16
VCAN-205ENST00000503923 M0R381 172 aa7.79□□□□□ -1.16
VCAN-205ENST00000503923 GATCO43716 136 aaKnown RBP7.79□□□□□ -1.16
VCAN-205ENST00000503923 IGLC6P0CF74 106 aa7.79□□□□□ -1.16
VCAN-205ENST00000503923 GZMBP10144 247 aa7.79□□□□□ -1.16
VCAN-205ENST00000503923 LGALS9CQ6DKI2 356 aa7.79□□□□□ -1.16
VCAN-205ENST00000503923 FER1L6-AS1Q8NA97 138 aa7.79□□□□□ -1.16
VCAN-205ENST00000503923 LINC00476Q8WZB0 136 aa7.79□□□□□ -1.16
VCAN-205ENST00000503923 HHLA3Q9XRX5 114 aa7.79□□□□□ -1.16
VCAN-205ENST00000503923 NACAE9PAV3 2078 aa7.79□□□□□ -1.16
VCAN-205ENST00000503923 A0A1W2PPQ1 181 aa7.78□□□□□ -1.16
VCAN-205ENST00000503923 F2Z2F3 143 aa7.78□□□□□ -1.16
VCAN-205ENST00000503923 PAX4O43316 350 aa7.78□□□□□ -1.16
VCAN-205ENST00000503923 NXPH4O95158 308 aa7.78□□□□□ -1.16
VCAN-205ENST00000503923 NUDT3O95989 172 aa7.78□□□□□ -1.16
VCAN-205ENST00000503923 CRYBA4P53673 196 aa7.78□□□□□ -1.16
VCAN-205ENST00000503923 RPL23P62829 140 aaKnown RBP7.78□□□□□ -1.16
VCAN-205ENST00000503923 CT83Q5H943 113 aa7.78□□□□□ -1.16
VCAN-205ENST00000503923 SPANXN1Q5VSR9 72 aa7.78□□□□□ -1.16
VCAN-205ENST00000503923 UQCC3Q6UW78 93 aa7.78□□□□□ -1.16
VCAN-205ENST00000503923 ZFP2Q6ZN57 461 aa7.78□□□□□ -1.16
VCAN-205ENST00000503923 OR10AG1Q8NH19 301 aa7.78□□□□□ -1.16
VCAN-205ENST00000503923 SFRP2Q96HF1 295 aa7.78□□□□□ -1.16
VCAN-205ENST00000503923 VSIG2Q96IQ7 327 aa7.78□□□□□ -1.16
VCAN-205ENST00000503923 TPPP3Q9BW30 176 aa7.78□□□□□ -1.16
VCAN-205ENST00000503923 OSTCQ9NRP0 149 aa7.78□□□□□ -1.16
VCAN-205ENST00000503923 A8MWL6 223 aa7.77□□□□□ -1.17
VCAN-205ENST00000503923 RHODO00212 210 aa7.77□□□□□ -1.17
VCAN-205ENST00000503923 LY6G6CO95867 125 aa7.77□□□□□ -1.17
VCAN-205ENST00000503923 P0DMU3 169 aa7.77□□□□□ -1.17
VCAN-205ENST00000503923 FAM231AP0DMU4 169 aa7.77□□□□□ -1.17
VCAN-205ENST00000503923 FAM231CP0DMU5 169 aa7.77□□□□□ -1.17
VCAN-205ENST00000503923 GATA1P15976 413 aaPredicted RBP7.77□□□□□ -1.17
VCAN-205ENST00000503923 CACNG7P62955 275 aa7.77□□□□□ -1.17
VCAN-205ENST00000503923 ADIRFQ15847 76 aa7.77□□□□□ -1.17
VCAN-205ENST00000503923 C15orf54Q8N8G6 183 aa7.77□□□□□ -1.17
VCAN-205ENST00000503923 ISOC2Q96AB3 205 aa7.77□□□□□ -1.17
VCAN-205ENST00000503923 JPT2Q9H910 190 aa7.77□□□□□ -1.17
VCAN-205ENST00000503923 IGHV3-73A0A0B4J1V6 119 aa7.76□□□□□ -1.17
VCAN-205ENST00000503923 MUC21A0A0G2JKD1 596 aa7.76□□□□□ -1.17
VCAN-205ENST00000503923 MUC21A0A140T8X8 626 aa7.76□□□□□ -1.17
VCAN-205ENST00000503923 LYZL1Q6UWQ5 148 aa7.76□□□□□ -1.17
VCAN-205ENST00000503923 SAMD10Q9BYL1 202 aa7.76□□□□□ -1.17
VCAN-205ENST00000503923 ICOSQ9Y6W8 199 aa7.76□□□□□ -1.17
VCAN-205ENST00000503923 VPS13DQ5THJ4 4388 aa7.76□□□□□ -1.17
VCAN-205ENST00000503923 A0A096LPF7 62 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms