RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 AKR1C3P42330 323 aa12.59□□□□□ -0.39
HOXD11-202ENST00000498438 COX8CQ7Z4L0 72 aa12.59□□□□□ -0.39
HOXD11-202ENST00000498438 TXNDC17Q9BRA2 123 aa12.59□□□□□ -0.39
HOXD11-202ENST00000498438 IGHV3-73A0A0B4J1V6 119 aa12.58□□□□□ -0.4
HOXD11-202ENST00000498438 TRBV6-1A0A0K0K1D8 114 aa12.58□□□□□ -0.4
HOXD11-202ENST00000498438 B4DEV8 164 aa12.58□□□□□ -0.4
HOXD11-202ENST00000498438 SH2D1AO60880 128 aa12.58□□□□□ -0.4
HOXD11-202ENST00000498438 LTAP01374 205 aa12.58□□□□□ -0.4
HOXD11-202ENST00000498438 S100A4P26447 101 aaKnown RBP12.58□□□□□ -0.4
HOXD11-202ENST00000498438 ASIPP42127 132 aa12.58□□□□□ -0.4
HOXD11-202ENST00000498438 CRIP1P50238 77 aa12.58□□□□□ -0.4
HOXD11-202ENST00000498438 PTH2Q96A98 100 aa12.58□□□□□ -0.4
HOXD11-202ENST00000498438 H2AFB1P0C5Y9 115 aa12.57□□□□□ -0.4
HOXD11-202ENST00000498438 FAM162BQ5T6X4 162 aa12.57□□□□□ -0.4
HOXD11-202ENST00000498438 ZNF575Q86XF7 245 aa12.57□□□□□ -0.4
HOXD11-202ENST00000498438 TCTE3Q8IZS6 198 aa12.57□□□□□ -0.4
HOXD11-202ENST00000498438 SCO2A0A1W2PP80 73 aa12.56□□□□□ -0.4
HOXD11-202ENST00000498438 KRBOX1C9JBD0 128 aa12.56□□□□□ -0.4
HOXD11-202ENST00000498438 H3BVH4 76 aa12.56□□□□□ -0.4
HOXD11-202ENST00000498438 M0R036 132 aa12.56□□□□□ -0.4
HOXD11-202ENST00000498438 CIDEAO60543 219 aa12.56□□□□□ -0.4
HOXD11-202ENST00000498438 LINC00315P59091 139 aa12.56□□□□□ -0.4
HOXD11-202ENST00000498438 SLC25A29Q8N8R3 303 aa12.56□□□□□ -0.4
HOXD11-202ENST00000498438 NHLRC2Q8NBF2 726 aa12.56□□□□□ -0.4
HOXD11-202ENST00000498438 BTF3P20290 206 aaKnown RBP12.55□□□□□ -0.4
HOXD11-202ENST00000498438 ZNF674Q2M3X9 581 aa12.55□□□□□ -0.4
HOXD11-202ENST00000498438 WFDC10BQ8IUB3 73 aa12.55□□□□□ -0.4
HOXD11-202ENST00000498438 IL36BQ9NZH7 164 aa12.55□□□□□ -0.4
HOXD11-202ENST00000498438 TRBV6-4A0A1B0GX49 114 aa12.54□□□□□ -0.4
HOXD11-202ENST00000498438 RHOHQ15669 191 aa12.54□□□□□ -0.4
HOXD11-202ENST00000498438 LGALSLQ3ZCW2 172 aaPredicted RBP12.54□□□□□ -0.4
HOXD11-202ENST00000498438 Q6ZNX1 250 aa12.54□□□□□ -0.4
HOXD11-202ENST00000498438 SH2D6Q7Z4S9 175 aa12.54□□□□□ -0.4
HOXD11-202ENST00000498438 PRADC1Q9BSG0 188 aa12.54□□□□□ -0.4
HOXD11-202ENST00000498438 PARLQ9H300 379 aa12.54□□□□□ -0.4
HOXD11-202ENST00000498438 GRIFINA4D1Z8 144 aa12.53□□□□□ -0.4
HOXD11-202ENST00000498438 MED14OSP0DP75 135 aa12.53□□□□□ -0.4
HOXD11-202ENST00000498438 LINC01559Q495D7 138 aa12.53□□□□□ -0.4
HOXD11-202ENST00000498438 PIK3CD-AS1Q5SR53 167 aa12.53□□□□□ -0.4
HOXD11-202ENST00000498438 DNLZQ5SXM8 178 aa12.53□□□□□ -0.4
HOXD11-202ENST00000498438 LY96Q9Y6Y9 160 aa12.53□□□□□ -0.4
HOXD11-202ENST00000498438 TMSB15BA0A087X1C1 80 aa12.52□□□□□ -0.41
HOXD11-202ENST00000498438 A8MWV9 139 aa12.52□□□□□ -0.41
HOXD11-202ENST00000498438 S100A9P06702 114 aaKnown RBP12.52□□□□□ -0.41
HOXD11-202ENST00000498438 ARMS2P0C7Q2 107 aa12.52□□□□□ -0.41
HOXD11-202ENST00000498438 MGST1P10620 155 aaKnown RBP12.52□□□□□ -0.41
HOXD11-202ENST00000498438 JPT2Q9H910 190 aa12.52□□□□□ -0.41
HOXD11-202ENST00000498438 C1QBP02746 253 aa12.51□□□□□ -0.41
HOXD11-202ENST00000498438 RAB5CP51148 216 aa12.51□□□□□ -0.41
HOXD11-202ENST00000498438 TIRAPP58753 221 aa12.51□□□□□ -0.41
HOXD11-202ENST00000498438 CCL20P78556 96 aa12.51□□□□□ -0.41
HOXD11-202ENST00000498438 DMRTA1Q5VZB9 504 aa12.51□□□□□ -0.41
HOXD11-202ENST00000498438 EIF5AL1Q6IS14 154 aaKnown RBP12.51□□□□□ -0.41
HOXD11-202ENST00000498438 ZFP2Q6ZN57 461 aa12.51□□□□□ -0.41
HOXD11-202ENST00000498438 Q6ZRN7 208 aaPredicted RBP12.51□□□□□ -0.41
HOXD11-202ENST00000498438 MANBALQ9NQG1 85 aa12.51□□□□□ -0.41
HOXD11-202ENST00000498438 TRAV1-1A0A0B4J248 108 aa12.5□□□□□ -0.41
HOXD11-202ENST00000498438 DNAH10OSP0CZ25 163 aa12.5□□□□□ -0.41
HOXD11-202ENST00000498438 Q6ZSN1 163 aa12.5□□□□□ -0.41
HOXD11-202ENST00000498438 SYT8Q8NBV8 401 aa12.5□□□□□ -0.41
HOXD11-202ENST00000498438 GNG13Q9P2W3 67 aa12.5□□□□□ -0.41
HOXD11-202ENST00000498438 TRAV9-2A0A087WT02 112 aa12.49□□□□□ -0.41
HOXD11-202ENST00000498438 C16orf90A8MZG2 172 aa12.49□□□□□ -0.41
HOXD11-202ENST00000498438 EVI2AP22794 236 aa12.49□□□□□ -0.41
HOXD11-202ENST00000498438 SULT1A2P50226 295 aa12.49□□□□□ -0.41
HOXD11-202ENST00000498438 UFSP1Q6NVU6 142 aa12.49□□□□□ -0.41
HOXD11-202ENST00000498438 BAGE2Q86Y30 109 aa12.49□□□□□ -0.41
HOXD11-202ENST00000498438 MLST8Q9BVC4 326 aa12.49□□□□□ -0.41
HOXD11-202ENST00000498438 SAMD10Q9BYL1 202 aa12.49□□□□□ -0.41
HOXD11-202ENST00000498438 SCRT2Q9NQ03 307 aa12.49□□□□□ -0.41
HOXD11-202ENST00000498438 PHLDA3Q9Y5J5 127 aa12.49□□□□□ -0.41
HOXD11-202ENST00000498438 TNFRSF18Q9Y5U5 241 aa12.49□□□□□ -0.41
HOXD11-202ENST00000498438 hCG_2014768A0A024R1R8 64 aa12.48□□□□□ -0.41
HOXD11-202ENST00000498438 SPATA12Q7Z6I5 190 aa12.48□□□□□ -0.41
HOXD11-202ENST00000498438 SLC51BQ86UW2 128 aa12.48□□□□□ -0.41
HOXD11-202ENST00000498438 LRP1BQ9NZR2 4599 aa12.48□□□□□ -0.41
HOXD11-202ENST00000498438 RPL35P42766 123 aaKnown RBP12.47□□□□□ -0.41
HOXD11-202ENST00000498438 RPL19P84098 196 aaKnown RBP12.47□□□□□ -0.41
HOXD11-202ENST00000498438 AKAP14Q86UN6 197 aa12.47□□□□□ -0.41
HOXD11-202ENST00000498438 DERL1Q9BUN8 251 aa12.47□□□□□ -0.41
HOXD11-202ENST00000498438 TEX46H3BTG2 121 aa12.46□□□□□ -0.41
HOXD11-202ENST00000498438 K7EP13 123 aa12.46□□□□□ -0.41
HOXD11-202ENST00000498438 M0R381 172 aa12.46□□□□□ -0.41
HOXD11-202ENST00000498438 RHODO00212 210 aa12.46□□□□□ -0.41
HOXD11-202ENST00000498438 CRYGDP07320 174 aa12.46□□□□□ -0.41
HOXD11-202ENST00000498438 FAM74A4Q5TZK3 123 aa12.46□□□□□ -0.41
HOXD11-202ENST00000498438 PRR27Q6MZM9 219 aa12.46□□□□□ -0.41
HOXD11-202ENST00000498438 ATP6V0E2Q8NHE4 81 aa12.46□□□□□ -0.41
HOXD11-202ENST00000498438 C11orf52Q96A22 123 aa12.46□□□□□ -0.41
HOXD11-202ENST00000498438 MSRB1Q9NZV6 116 aa12.46□□□□□ -0.41
HOXD11-202ENST00000498438 RYR1P21817 5038 aa12.46□□□□□ -0.42
HOXD11-202ENST00000498438 TRAV8-6A0A0B4J262 113 aa12.45□□□□□ -0.42
HOXD11-202ENST00000498438 IGHV3-38A0A0C4DH36 116 aa12.45□□□□□ -0.42
HOXD11-202ENST00000498438 GAGE12JA6NER3 117 aa12.45□□□□□ -0.42
HOXD11-202ENST00000498438 LINC00694P0DN24 101 aa12.45□□□□□ -0.42
HOXD11-202ENST00000498438 GAGE1Q13065 139 aa12.45□□□□□ -0.42
HOXD11-202ENST00000498438 GAGE4Q13068 117 aa12.45□□□□□ -0.42
HOXD11-202ENST00000498438 GAGE5Q13069 117 aa12.45□□□□□ -0.42
HOXD11-202ENST00000498438 GAGE13Q4V321 117 aa12.45□□□□□ -0.42
HOXD11-202ENST00000498438 OR10J3Q5JRS4 329 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms