RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 Q6ZVH6 145 aa9.44□□□□□ -0.9
AFF3-215ENST00000498090 MYOZ3Q8TDC0 251 aa9.44□□□□□ -0.9
AFF3-215ENST00000498090 C11orf21Q9P2W6 132 aa9.44□□□□□ -0.9
AFF3-215ENST00000498090 ZNF580Q9UK33 172 aa9.44□□□□□ -0.9
AFF3-215ENST00000498090 FN1P02751 2386 aaKnown RBP9.44□□□□□ -0.9
AFF3-215ENST00000498090 DPM2O94777 84 aa9.43□□□□□ -0.9
AFF3-215ENST00000498090 PPP1R17O96001 155 aa9.43□□□□□ -0.9
AFF3-215ENST00000498090 PRSS1P07477 247 aa9.43□□□□□ -0.9
AFF3-215ENST00000498090 NRACQ8N912 160 aa9.43□□□□□ -0.9
AFF3-215ENST00000498090 AP1S3Q96PC3 154 aa9.43□□□□□ -0.9
AFF3-215ENST00000498090 IGHV3OR16-13A0A075B7E8 117 aa9.42□□□□□ -0.9
AFF3-215ENST00000498090 IGHV3-74A0A0B4J1X5 117 aa9.42□□□□□ -0.9
AFF3-215ENST00000498090 SOCS3O14543 225 aa9.42□□□□□ -0.9
AFF3-215ENST00000498090 HOXA3O43365 443 aaPredicted RBP9.42□□□□□ -0.9
AFF3-215ENST00000498090 SMIM17P0DL12 118 aa9.42□□□□□ -0.9
AFF3-215ENST00000498090 PPIFP30405 207 aaKnown RBP9.42□□□□□ -0.9
AFF3-215ENST00000498090 ADAMTSL5Q6ZMM2 481 aa9.42□□□□□ -0.9
AFF3-215ENST00000498090 GTF2H5Q6ZYL4 71 aa9.42□□□□□ -0.9
AFF3-215ENST00000498090 APRG1Q8IVJ8 170 aa9.42□□□□□ -0.9
AFF3-215ENST00000498090 TMEM158Q8WZ71 300 aa9.42□□□□□ -0.9
AFF3-215ENST00000498090 C20orf78Q9BR46 151 aa9.42□□□□□ -0.9
AFF3-215ENST00000498090 CBY3A6NI87 242 aa9.42□□□□□ -0.9
AFF3-215ENST00000498090 INAFM1C9JVW0 142 aa9.42□□□□□ -0.9
AFF3-215ENST00000498090 ZNF207O43670 478 aaKnown RBP9.42□□□□□ -0.9
AFF3-215ENST00000498090 ASIPP42127 132 aa9.42□□□□□ -0.9
AFF3-215ENST00000498090 NMUP48645 174 aa9.42□□□□□ -0.9
AFF3-215ENST00000498090 ORMDL2Q53FV1 153 aa9.42□□□□□ -0.9
AFF3-215ENST00000498090 DKK2Q9UBU2 259 aa9.42□□□□□ -0.9
AFF3-215ENST00000498090 HHLA3Q9XRX5 114 aa9.42□□□□□ -0.9
AFF3-215ENST00000498090 IGHV3-49A0A0A0MS15 119 aa9.41□□□□□ -0.9
AFF3-215ENST00000498090 C9orf118A6NHY6 69 aa9.41□□□□□ -0.9
AFF3-215ENST00000498090 LINC01549A6NIU2 74 aa9.41□□□□□ -0.9
AFF3-215ENST00000498090 M0R381 172 aa9.41□□□□□ -0.9
AFF3-215ENST00000498090 PLNP26678 52 aa9.41□□□□□ -0.9
AFF3-215ENST00000498090 FXYD7P58549 80 aa9.41□□□□□ -0.9
AFF3-215ENST00000498090 FOXE3Q13461 319 aa9.41□□□□□ -0.9
AFF3-215ENST00000498090 AMMECR1LQ6DCA0 310 aa9.41□□□□□ -0.9
AFF3-215ENST00000498090 FAM19A4Q96LR4 140 aa9.41□□□□□ -0.9
AFF3-215ENST00000498090 C18orf15Q96N68 181 aa9.41□□□□□ -0.9
AFF3-215ENST00000498090 DUX5Q96PT3 197 aa9.41□□□□□ -0.9
AFF3-215ENST00000498090 VPREB3Q9UKI3 123 aa9.41□□□□□ -0.9
AFF3-215ENST00000498090 UFC1Q9Y3C8 167 aa9.41□□□□□ -0.9
AFF3-215ENST00000498090 TRAV12-1A0A0B4J245 112 aa9.4□□□□□ -0.9
AFF3-215ENST00000498090 SRD5A1P18405 259 aa9.4□□□□□ -0.9
AFF3-215ENST00000498090 ZFAND2AQ8N6M9 145 aa9.4□□□□□ -0.9
AFF3-215ENST00000498090 DPH3P1Q9H4G8 78 aa9.4□□□□□ -0.9
AFF3-215ENST00000498090 ESM1Q9NQ30 184 aa9.4□□□□□ -0.9
AFF3-215ENST00000498090 SONP18583 2426 aaKnown RBP9.4□□□□□ -0.91
AFF3-215ENST00000498090 K7EMT4 169 aa9.39□□□□□ -0.91
AFF3-215ENST00000498090 Q6ZS46 218 aa9.39□□□□□ -0.91
AFF3-215ENST00000498090 C20orf173Q96LM9 149 aa9.39□□□□□ -0.91
AFF3-215ENST00000498090 SMIM2Q9BVW6 85 aa9.39□□□□□ -0.91
AFF3-215ENST00000498090 HIVEP2P31629 2446 aa9.39□□□□□ -0.91
AFF3-215ENST00000498090 A0A087WX48 190 aa9.39□□□□□ -0.91
AFF3-215ENST00000498090 DNAJC9-AS1A6NH13 148 aa9.39□□□□□ -0.91
AFF3-215ENST00000498090 H3BVH4 76 aa9.39□□□□□ -0.91
AFF3-215ENST00000498090 GAS8-AS1O95177 125 aa9.39□□□□□ -0.91
AFF3-215ENST00000498090 IGLV1-40P01703 118 aa9.39□□□□□ -0.91
AFF3-215ENST00000498090 GATA1P15976 413 aaPredicted RBP9.39□□□□□ -0.91
AFF3-215ENST00000498090 S100A4P26447 101 aaKnown RBP9.39□□□□□ -0.91
AFF3-215ENST00000498090 CDKN1BP46527 198 aa9.39□□□□□ -0.91
AFF3-215ENST00000498090 BLCAPP62952 87 aa9.39□□□□□ -0.91
AFF3-215ENST00000498090 UNQ9165/PRO28630Q6UXU0 137 aa9.39□□□□□ -0.91
AFF3-215ENST00000498090 GPHB5Q86YW7 130 aa9.39□□□□□ -0.91
AFF3-215ENST00000498090 DAZ1Q9NQZ3 744 aaKnown RBP9.39□□□□□ -0.91
AFF3-215ENST00000498090 GAGE10A6NGK3 116 aa9.38□□□□□ -0.91
AFF3-215ENST00000498090 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.38□□□□□ -0.91
AFF3-215ENST00000498090 ID1P41134 155 aa9.38□□□□□ -0.91
AFF3-215ENST00000498090 TAL2Q16559 108 aa9.38□□□□□ -0.91
AFF3-215ENST00000498090 PCP2Q8IVA1 136 aa9.38□□□□□ -0.91
AFF3-215ENST00000498090 TMEM86BQ8N661 226 aa9.38□□□□□ -0.91
AFF3-215ENST00000498090 PHLDA3Q9Y5J5 127 aa9.38□□□□□ -0.91
AFF3-215ENST00000498090 TRAV8-6A0A0B4J262 113 aa9.37□□□□□ -0.91
AFF3-215ENST00000498090 TMEM89A2RUT3 159 aa9.37□□□□□ -0.91
AFF3-215ENST00000498090 SUMO2P61956 95 aaKnown RBP9.37□□□□□ -0.91
AFF3-215ENST00000498090 WFDC3Q8IUB2 231 aa9.37□□□□□ -0.91
AFF3-215ENST00000498090 POM121L12Q8N7R1 296 aa9.37□□□□□ -0.91
AFF3-215ENST00000498090 RNASE8Q8TDE3 154 aaKnown RBP9.37□□□□□ -0.91
AFF3-215ENST00000498090 CUBNO60494 3623 aa9.37□□□□□ -0.91
AFF3-215ENST00000498090 NXPH4O95158 308 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 PF4V1P10720 104 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 RBX1P62877 108 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 RPL32P62910 135 aaKnown RBP9.36□□□□□ -0.91
AFF3-215ENST00000498090 PRR9Q5T870 116 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 ZC2HC1BQ5TFG8 222 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 OR5A1Q8NGJ0 315 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 TOMM6Q96B49 74 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 RHPN1-AS1Q9BWJ2 59 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 CST9LQ9H4G1 147 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 LINC00527Q9UJ94 153 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 MXRA5Q9NR99 2828 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 GAGE12BA1L429 117 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 H7C1H1 209 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 TRBV12-3P01733 135 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 SMIM13P0DJ93 91 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 CFHR3Q02985 330 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 SCGB2A2Q13296 93 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 UFSP1Q6NVU6 142 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 ZNF702PQ9H963 129 aa9.36□□□□□ -0.91
AFF3-215ENST00000498090 TRAV26-2A0A0B4J265 109 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms