RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 SH2D1AO60880 128 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 CA1P00915 261 aaPredicted RBP3.91□□□□□ -1.78
GGPS1-208ENST00000497327 RAB5AP20339 215 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 FOXA3P55318 350 aaPredicted RBP3.91□□□□□ -1.78
GGPS1-208ENST00000497327 SNRPD3P62318 126 aaKnown RBP3.91□□□□□ -1.78
GGPS1-208ENST00000497327 SMUG1Q53HV7 270 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 PSMG4Q5JS54 123 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 TMEM78Q5T7P6 136 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 PRR9Q5T870 116 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 PRR27Q6MZM9 219 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 AMTNQ6UX39 209 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 FOXI2Q6ZQN5 318 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 OR4B1Q8NGF8 309 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 OR10J6PQ8NGY7 276 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 DYNLRB2Q8TF09 96 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 TSKUQ8WUA8 353 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 GTSF1Q8WW33 167 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 GFRA4Q9GZZ7 299 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 SAV1Q9H4B6 383 aaPredicted RBP3.91□□□□□ -1.78
GGPS1-208ENST00000497327 RPP21Q9H633 154 aaKnown RBP3.91□□□□□ -1.78
GGPS1-208ENST00000497327 SCRT2Q9NQ03 307 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 URGCP-MRPS24S4R325 110 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 CUBNO60494 3623 aa3.91□□□□□ -1.78
GGPS1-208ENST00000497327 TENM1Q9UKZ4 2725 aa3.9□□□□□ -1.78
GGPS1-208ENST00000497327 IGKV3D-20A0A0C4DH25 116 aa3.9□□□□□ -1.79
GGPS1-208ENST00000497327 RBMY1BA6NDE4 496 aaKnown RBP3.9□□□□□ -1.79
GGPS1-208ENST00000497327 RBMY1EA6NEQ0 496 aaKnown RBP3.9□□□□□ -1.79
GGPS1-208ENST00000497327 OR4C46A6NHA9 309 aa3.9□□□□□ -1.79
GGPS1-208ENST00000497327 FABP5P3A8MUU1 101 aa3.9□□□□□ -1.79
GGPS1-208ENST00000497327 ZNF705GA8MUZ8 300 aaPredicted RBP3.9□□□□□ -1.79
GGPS1-208ENST00000497327 H3BMM0 161 aa3.9□□□□□ -1.79
GGPS1-208ENST00000497327 P01737 135 aa3.9□□□□□ -1.79
GGPS1-208ENST00000497327 RBMY1DP0C7P1 496 aaKnown RBP3.9□□□□□ -1.79
GGPS1-208ENST00000497327 HLA-DRB4P13762 266 aa3.9□□□□□ -1.79
GGPS1-208ENST00000497327 DEFB131AP59861 70 aa3.9□□□□□ -1.79
GGPS1-208ENST00000497327 HIST1H1AQ02539 215 aaPredicted RBP3.9□□□□□ -1.79
GGPS1-208ENST00000497327 FAM162BQ5T6X4 162 aa3.9□□□□□ -1.79
GGPS1-208ENST00000497327 Q6AWC8 147 aa3.9□□□□□ -1.79
GGPS1-208ENST00000497327 Q6ZQT7 251 aa3.9□□□□□ -1.79
GGPS1-208ENST00000497327 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.9□□□□□ -1.79
GGPS1-208ENST00000497327 OR2D3Q8NGH3 330 aa3.9□□□□□ -1.79
GGPS1-208ENST00000497327 FAM210BQ96KR6 192 aa3.9□□□□□ -1.79
GGPS1-208ENST00000497327 NDFIP1Q9BT67 221 aa3.9□□□□□ -1.79
GGPS1-208ENST00000497327 SRD5A3Q9H8P0 318 aa3.9□□□□□ -1.79
GGPS1-208ENST00000497327 HLA-DRB4X5D2U9 266 aa3.9□□□□□ -1.79
GGPS1-208ENST00000497327 A0A1B0GVY2 172 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 A0A1B0GXF2 115 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 A0A1W2PPQ1 181 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 TMEM189A5PLL7 270 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 KNCNA6PVL3 124 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 A8MWL6 223 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 SAP30O75446 220 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 ZNF324O75467 553 aaPredicted RBP3.89□□□□□ -1.79
GGPS1-208ENST00000497327 DUSP14O95147 198 aaKnown RBP3.89□□□□□ -1.79
GGPS1-208ENST00000497327 AMBPP02760 352 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 FRMD6-AS1P0C7T7 363 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 IGLC6P0CF74 106 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 S100PP25815 95 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 CAMPP49913 170 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 INSL3P51460 131 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 RPL19P84098 196 aaKnown RBP3.89□□□□□ -1.79
GGPS1-208ENST00000497327 C14orf177Q52M58 125 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 EBLN2Q6P2I7 272 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 KCNIP4Q6PIL6 250 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 NUP35Q8NFH5 326 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 BTF3L4Q96K17 158 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 NAT8BQ9UHF3 227 aa3.89□□□□□ -1.79
GGPS1-208ENST00000497327 FBN1P35555 2871 aaKnown RBP3.88□□□□□ -1.79
GGPS1-208ENST00000497327 HIGD1CA8MV81 97 aa3.88□□□□□ -1.79
GGPS1-208ENST00000497327 VCYO14598 125 aa3.88□□□□□ -1.79
GGPS1-208ENST00000497327 CRXO43186 299 aaPredicted RBP3.88□□□□□ -1.79
GGPS1-208ENST00000497327 CD7P09564 240 aa3.88□□□□□ -1.79
GGPS1-208ENST00000497327 GZMBP10144 247 aa3.88□□□□□ -1.79
GGPS1-208ENST00000497327 LEPP41159 167 aa3.88□□□□□ -1.79
GGPS1-208ENST00000497327 CMC4P56277 68 aaPredicted RBP3.88□□□□□ -1.79
GGPS1-208ENST00000497327 TCL1AP56279 114 aa3.88□□□□□ -1.79
GGPS1-208ENST00000497327 SEC61BP60468 96 aaKnown RBP3.88□□□□□ -1.79
GGPS1-208ENST00000497327 RPS20P60866 119 aaKnown RBP3.88□□□□□ -1.79
GGPS1-208ENST00000497327 TDRG1Q3Y452 100 aa3.88□□□□□ -1.79
GGPS1-208ENST00000497327 ACTL10Q5JWF8 245 aa3.88□□□□□ -1.79
GGPS1-208ENST00000497327 PAPPA-AS1Q5QFB9 102 aa3.88□□□□□ -1.79
GGPS1-208ENST00000497327 DNLZQ5SXM8 178 aa3.88□□□□□ -1.79
GGPS1-208ENST00000497327 C9orf66Q5T8R8 295 aa3.88□□□□□ -1.79
GGPS1-208ENST00000497327 PET117Q6UWS5 81 aa3.88□□□□□ -1.79
GGPS1-208ENST00000497327 TRPT1Q86TN4 253 aaKnown RBP3.88□□□□□ -1.79
GGPS1-208ENST00000497327 KRTAP7-1Q8IUC3 87 aa3.88□□□□□ -1.79
GGPS1-208ENST00000497327 TMEM158Q8WZ71 300 aa3.88□□□□□ -1.79
GGPS1-208ENST00000497327 COL6A5A8TX70 2615 aa3.88□□□□□ -1.79
GGPS1-208ENST00000497327 TRAV21A0A0B4J279 112 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 C7orf71A4D174 169 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 OR11H12B2RN74 326 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 M0R2Z0 102 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 SNAI2O43623 268 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 ORM1P02763 201 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 TRGC2P03986 189 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 GPX1P07203 203 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 GIG44P09565 113 aaPredicted RBP3.87□□□□□ -1.79
GGPS1-208ENST00000497327 RBMY1A1P0DJD3 496 aaKnown RBP3.87□□□□□ -1.79
GGPS1-208ENST00000497327 RBMY1CP0DJD4 496 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms