RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PIRTP0C851 137 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 BAALC-AS2P0C853 105 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 CBLN1P23435 193 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 FAUP35544 74 aaKnown RBP1.79□□□□□ -2.12
VPS36-206ENST00000497149 SEC11AP67812 179 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 CCL8P80075 99 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 HMGN3Q15651 99 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 SPANXN5Q5MJ07 72 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 SPANXN1Q5VSR9 72 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 UNQ5815/PRO19632Q6UWF5 114 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 Q6ZS52 159 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 C2orf91Q6ZV80 131 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 SLC25A26Q70HW3 274 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 DYNLRB2Q8TF09 96 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 PMCHL2Q9BQD1 86 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 ST20Q9HBF5 79 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 C14orf132Q9NPU4 83 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 PLIN4Q96Q06 1357 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 CPSF1Q10570 1443 aaKnown RBP1.79□□□□□ -2.12
VPS36-206ENST00000497149 GAPVD1Q14C86 1478 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 NISCHQ9Y2I1 1504 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 PSME4Q14997 1843 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 HEATR5BQ9P2D3 2071 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 RP1P56715 2156 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 MALRD1Q5VYJ5 2156 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 GLI3P10071 1580 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 ABCC3O15438 1527 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 IFT140Q96RY7 1462 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 EEA1Q15075 1411 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 SCAPERQ9BY12 1400 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 IGHV3-64A0A075B6Q5 118 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 TRAV14DV4A0A0A6YYC5 116 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 RBAKDNA6NC62 111 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 H3BRM9 83 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 ATOX1O00244 68 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 SFT2D2O95562 160 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 IGKCP01834 107 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 NMBP08949 121 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 SLC25A6P12236 298 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 SSR2P43308 183 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 TDRG1Q3Y452 100 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 RPL7L1Q6DKI1 246 aaKnown RBP1.78□□□□□ -2.12
VPS36-206ENST00000497149 Q6ZQT0 140 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 FP248Q71RG6 208 aaPredicted RBP1.78□□□□□ -2.12
VPS36-206ENST00000497149 MYOZ3Q8TDC0 251 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 ZNF431Q8TF32 576 aaPredicted RBP1.78□□□□□ -2.12
VPS36-206ENST00000497149 CACFD1Q9UGQ2 172 aa1.78□□□□□ -2.12
VPS36-206ENST00000497149 ICE1Q9Y2F5 2266 aa1.78□□□□□ -2.13
VPS36-206ENST00000497149 MICAL3Q7RTP6 2002 aa1.78□□□□□ -2.13
VPS36-206ENST00000497149 MYH8P13535 1937 aa1.78□□□□□ -2.13
VPS36-206ENST00000497149 ADGRB1O14514 1584 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 DNMBPQ6XZF7 1577 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 KIAA0100Q14667 2235 aaKnown RBP1.77□□□□□ -2.13
VPS36-206ENST00000497149 BAZ2BQ9UIF8 2168 aaKnown RBP1.77□□□□□ -2.13
VPS36-206ENST00000497149 IGHV1-18A0A0C4DH31 117 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 MUC21A0A140T8X8 626 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 KANTRA0A1W2PQU2 76 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 NAP1L6A6NFF2 107 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 C11orf86A6NJI1 115 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 A6NN06 94 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 NDUFC1O43677 76 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 CRPP02741 224 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 MGST1P10620 155 aaKnown RBP1.77□□□□□ -2.13
VPS36-206ENST00000497149 ZNF345Q14585 488 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 Q1T7F1 81 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 MPV17LQ2QL34 196 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 SPRNQ5BIV9 151 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 Q5BKY6 102 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 COMMD6Q7Z4G1 85 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 MUCL1Q96DR8 90 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 TMEM141Q96I45 108 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 DSCR8Q96T75 97 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 HHLA3Q9XRX5 114 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 BCORL1Q5H9F3 1711 aa1.77□□□□□ -2.13
VPS36-206ENST00000497149 ARHGAP5Q13017 1502 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 TRBV7-7A0A0K0K1E9 115 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 HMSDA8MTL9 139 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 E7EUB6 86 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 CCKP06307 115 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 DSCR4P56555 118 aaPredicted RBP1.76□□□□□ -2.13
VPS36-206ENST00000497149 SMIM11AP58511 58 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 ROMO1P60602 79 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 C1orf134Q5TEV5 83 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 Q8IYB0 196 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 Q8N814 137 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 Q8N8P6 123 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 LINC00301Q8NCQ3 95 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 OR8B3Q8NGG8 313 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 OR10AG1Q8NH19 301 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 FAM213BQ8TBF2 198 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 TMEM254Q8TBM7 123 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 PPDPFLQ8WWR9 84 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 TRGV9Q99603 122 aa1.76□□□□□ -2.13
VPS36-206ENST00000497149 MRPL35Q9NZE8 188 aaKnown RBP1.76□□□□□ -2.13
VPS36-206ENST00000497149 CCDC88BA6NC98 1476 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 POLA1P09884 1462 aaPredicted RBP1.75□□□□□ -2.13
VPS36-206ENST00000497149 ERVK-7P63135 1459 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 PLEKHH2Q8IVE3 1493 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 C10orf71Q711Q0 1435 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 ARAP2Q8WZ64 1704 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms