RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 IGFL4Q6B9Z1 124 aa9.9□□□□□ -0.83
VEGFA-215ENST00000497139 C9orf47Q6ZRZ4 202 aa9.9□□□□□ -0.83
VEGFA-215ENST00000497139 NPBQ8NG41 125 aa9.9□□□□□ -0.83
VEGFA-215ENST00000497139 AGPAT4-IT1Q9H0P7 198 aa9.9□□□□□ -0.83
VEGFA-215ENST00000497139 LENEPQ9Y5L5 61 aa9.9□□□□□ -0.83
VEGFA-215ENST00000497139 NBR2O15453 112 aa9.89□□□□□ -0.83
VEGFA-215ENST00000497139 TSPEAR-AS2P59090 65 aa9.89□□□□□ -0.83
VEGFA-215ENST00000497139 IGIPA6NJ69 53 aa9.89□□□□□ -0.83
VEGFA-215ENST00000497139 ACYP1P07311 99 aa9.89□□□□□ -0.83
VEGFA-215ENST00000497139 C2orf82Q6UX34 121 aa9.89□□□□□ -0.83
VEGFA-215ENST00000497139 LRRC75A-AS1Q8N1F1 130 aa9.89□□□□□ -0.83
VEGFA-215ENST00000497139 SPXQ9BT56 116 aa9.89□□□□□ -0.83
VEGFA-215ENST00000497139 CSDC2Q9Y534 153 aaKnown RBP9.89□□□□□ -0.83
VEGFA-215ENST00000497139 LY6LH3BQJ8 138 aa9.88□□□□□ -0.83
VEGFA-215ENST00000497139 ID1P41134 155 aa9.88□□□□□ -0.83
VEGFA-215ENST00000497139 EBI3Q14213 229 aa9.88□□□□□ -0.83
VEGFA-215ENST00000497139 POM121L12Q8N7R1 296 aa9.88□□□□□ -0.83
VEGFA-215ENST00000497139 LEPROTO15243 131 aa9.88□□□□□ -0.83
VEGFA-215ENST00000497139 TCF15Q12870 199 aa9.88□□□□□ -0.83
VEGFA-215ENST00000497139 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.88□□□□□ -0.83
VEGFA-215ENST00000497139 A0A1B0GX51 115 aa9.87□□□□□ -0.83
VEGFA-215ENST00000497139 SDHAF1A6NFY7 115 aa9.87□□□□□ -0.83
VEGFA-215ENST00000497139 EIF4EBP3O60516 100 aaPredicted RBP9.87□□□□□ -0.83
VEGFA-215ENST00000497139 TSHBP01222 138 aa9.87□□□□□ -0.83
VEGFA-215ENST00000497139 Q1RN00 199 aa9.87□□□□□ -0.83
VEGFA-215ENST00000497139 MSRB2Q9Y3D2 182 aa9.87□□□□□ -0.83
VEGFA-215ENST00000497139 MALRD1Q5VYJ5 2156 aa9.87□□□□□ -0.83
VEGFA-215ENST00000497139 CTSGP08311 255 aa9.87□□□□□ -0.83
VEGFA-215ENST00000497139 ZNF876PQ49A33 203 aa9.87□□□□□ -0.83
VEGFA-215ENST00000497139 CHCHD5Q9BSY4 110 aa9.87□□□□□ -0.83
VEGFA-215ENST00000497139 CUL9Q8IWT3 2517 aa9.86□□□□□ -0.83
VEGFA-215ENST00000497139 ZNF56Q15929 161 aa9.86□□□□□ -0.83
VEGFA-215ENST00000497139 SEM1Q6ZVN7 128 aa9.86□□□□□ -0.83
VEGFA-215ENST00000497139 RPL39LQ96EH5 51 aaKnown RBP9.86□□□□□ -0.83
VEGFA-215ENST00000497139 C3orf22Q8N5N4 141 aa9.86□□□□□ -0.83
VEGFA-215ENST00000497139 S4R3C0 116 aa9.86□□□□□ -0.83
VEGFA-215ENST00000497139 TRAV17A0A0B4J275 112 aa9.85□□□□□ -0.83
VEGFA-215ENST00000497139 UQCRQO14949 82 aa9.85□□□□□ -0.83
VEGFA-215ENST00000497139 BUB3O43684 328 aa9.85□□□□□ -0.83
VEGFA-215ENST00000497139 NDUFA7O95182 113 aa9.85□□□□□ -0.83
VEGFA-215ENST00000497139 IGHV4-39P01824 125 aa9.85□□□□□ -0.83
VEGFA-215ENST00000497139 COX6CP09669 75 aa9.85□□□□□ -0.83
VEGFA-215ENST00000497139 DLX1P56177 255 aa9.85□□□□□ -0.83
VEGFA-215ENST00000497139 TP53TG1Q9Y2A0 90 aa9.85□□□□□ -0.83
VEGFA-215ENST00000497139 H7C423 109 aa9.85□□□□□ -0.83
VEGFA-215ENST00000497139 ADIPOQQ15848 244 aa9.85□□□□□ -0.83
VEGFA-215ENST00000497139 CCL17Q92583 94 aa9.85□□□□□ -0.83
VEGFA-215ENST00000497139 IGHV4OR15-8A0A075B7B6 117 aa9.84□□□□□ -0.83
VEGFA-215ENST00000497139 A0A087WW49 117 aa9.84□□□□□ -0.83
VEGFA-215ENST00000497139 J3KT08 172 aa9.84□□□□□ -0.83
VEGFA-215ENST00000497139 TRIAP1O43715 76 aa9.84□□□□□ -0.83
VEGFA-215ENST00000497139 IGFL2Q6UWQ7 119 aa9.84□□□□□ -0.83
VEGFA-215ENST00000497139 MUSTN1Q8IVN3 82 aa9.84□□□□□ -0.83
VEGFA-215ENST00000497139 ZNF318Q5VUA4 2279 aa9.84□□□□□ -0.83
VEGFA-215ENST00000497139 WIPF1O43516 503 aa9.84□□□□□ -0.83
VEGFA-215ENST00000497139 GPHB5Q86YW7 130 aa9.84□□□□□ -0.83
VEGFA-215ENST00000497139 RNF182Q8N6D2 247 aa9.84□□□□□ -0.83
VEGFA-215ENST00000497139 ELANEP08246 267 aa9.84□□□□□ -0.84
VEGFA-215ENST00000497139 C9orf153Q5TBE3 101 aa9.84□□□□□ -0.84
VEGFA-215ENST00000497139 LINC00526Q96FQ7 95 aa9.84□□□□□ -0.84
VEGFA-215ENST00000497139 ABCA1O95477 2261 aa9.83□□□□□ -0.84
VEGFA-215ENST00000497139 TMEM223A0PJW6 202 aa9.83□□□□□ -0.84
VEGFA-215ENST00000497139 IGHV1-69P01742 117 aa9.83□□□□□ -0.84
VEGFA-215ENST00000497139 CD3EP07766 207 aa9.83□□□□□ -0.84
VEGFA-215ENST00000497139 ZNRF2Q8NHG8 242 aa9.83□□□□□ -0.84
VEGFA-215ENST00000497139 RIF1Q5UIP0 2472 aaKnown RBP9.83□□□□□ -0.84
VEGFA-215ENST00000497139 FREM2Q5SZK8 3169 aa9.83□□□□□ -0.84
VEGFA-215ENST00000497139 H7C2G1 150 aa9.83□□□□□ -0.84
VEGFA-215ENST00000497139 LINC00694P0DN24 101 aa9.83□□□□□ -0.84
VEGFA-215ENST00000497139 RPS28P62857 69 aaKnown RBP9.83□□□□□ -0.84
VEGFA-215ENST00000497139 ATP1A1-AS1Q5TC04 95 aa9.83□□□□□ -0.84
VEGFA-215ENST00000497139 C14orf178Q8N769 122 aaPredicted RBP9.83□□□□□ -0.84
VEGFA-215ENST00000497139 METTL26Q96S19 204 aa9.83□□□□□ -0.84
VEGFA-215ENST00000497139 ICOSQ9Y6W8 199 aa9.83□□□□□ -0.84
VEGFA-215ENST00000497139 CADP27708 2225 aa9.82□□□□□ -0.84
VEGFA-215ENST00000497139 ZFAND3Q9H8U3 227 aa9.82□□□□□ -0.84
VEGFA-215ENST00000497139 PHLDA3Q9Y5J5 127 aa9.82□□□□□ -0.84
VEGFA-215ENST00000497139 FAM236AA0A1B0GUQ0 79 aa9.82□□□□□ -0.84
VEGFA-215ENST00000497139 FAM236BA0A1B0GV22 79 aa9.82□□□□□ -0.84
VEGFA-215ENST00000497139 VCYO14598 125 aa9.82□□□□□ -0.84
VEGFA-215ENST00000497139 MGPP08493 103 aa9.82□□□□□ -0.84
VEGFA-215ENST00000497139 OTOGLQ3ZCN5 2332 aa9.81□□□□□ -0.84
VEGFA-215ENST00000497139 TRAV21A0A0B4J279 112 aa9.81□□□□□ -0.84
VEGFA-215ENST00000497139 NPFFO15130 113 aa9.81□□□□□ -0.84
VEGFA-215ENST00000497139 NXPH4O95158 308 aa9.81□□□□□ -0.84
VEGFA-215ENST00000497139 POLR2KP53803 58 aaKnown RBP9.81□□□□□ -0.84
VEGFA-215ENST00000497139 EMP1P54849 157 aa9.81□□□□□ -0.84
VEGFA-215ENST00000497139 CNOT1A5YKK6 2376 aaKnown RBP9.81□□□□□ -0.84
VEGFA-215ENST00000497139 SMIM9A6NGZ8 99 aa9.81□□□□□ -0.84
VEGFA-215ENST00000497139 LST1O00453 97 aa9.81□□□□□ -0.84
VEGFA-215ENST00000497139 S100A4P26447 101 aaKnown RBP9.81□□□□□ -0.84
VEGFA-215ENST00000497139 COX7A1P24310 79 aa9.8□□□□□ -0.84
VEGFA-215ENST00000497139 KLK9Q2XQG4 91 aa9.8□□□□□ -0.84
VEGFA-215ENST00000497139 KLK9Q9UKQ9 250 aa9.8□□□□□ -0.84
VEGFA-215ENST00000497139 TRGV11A0A075B6L2 103 aa9.8□□□□□ -0.84
VEGFA-215ENST00000497139 A0A0G2JNJ9 132 aa9.8□□□□□ -0.84
VEGFA-215ENST00000497139 CXCL5P42830 114 aa9.8□□□□□ -0.84
VEGFA-215ENST00000497139 LINC00643Q86TS7 51 aa9.8□□□□□ -0.84
VEGFA-215ENST00000497139 LINC00477Q96M19 166 aa9.8□□□□□ -0.84
VEGFA-215ENST00000497139 Q9UFV3 132 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms