RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 AQP4P55087 323 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 DSCR10P59022 87 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 ZNF117Q03924 483 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 DIAPH2-AS1Q14236 149 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 NEDD8Q15843 81 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 KRTAP25-1Q3LHN0 102 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 RNASE10Q5GAN6 216 aaKnown RBP1.14□□□□□ -2.23
UBR4-217ENST00000497018 LCE1FQ5T754 118 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 ZNF705AQ6ZN79 300 aaPredicted RBP1.14□□□□□ -2.23
UBR4-217ENST00000497018 TRAPPC6BQ86SZ2 158 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 HIST3H2BBQ8N257 126 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 TEX29Q8N6K0 151 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 SIGLECL1Q8N7X8 197 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 FDCSPQ8NFU4 85 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 ZNF418Q8TF45 676 aaPredicted RBP1.14□□□□□ -2.23
UBR4-217ENST00000497018 DIRC1Q969H9 104 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 ARL11Q969Q4 196 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 YPEL2Q96QA6 119 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 IMMP2LQ96T52 175 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 CCL19Q99731 98 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 HIST1H2BLQ99880 126 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 MND1Q9BWT6 205 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 KRTAP4-9Q9BYQ8 210 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 NIT2Q9NQR4 276 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 SCN3BQ9NY72 215 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 TP53TG3Q9ULZ0 132 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 EPDR1Q9UM22 224 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 NYNRINQ9P2P1 1898 aaKnown RBP1.14□□□□□ -2.23
UBR4-217ENST00000497018 ABCA13Q86UQ4 5058 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 MYOFQ9NZM1 2061 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 TRGV10A0A0A0MS01 117 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 FAM236AA0A1B0GUQ0 79 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 FAM236BA0A1B0GV22 79 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 FAM92AA1XBS5 289 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 H3BPC8 53 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 H3BT86 120 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 K7ERJ3 54 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 HIST1H2BKO60814 126 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 NCR2O95944 276 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 IGLV3-19P01714 112 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 SLC25A5P05141 298 aaKnown RBP1.13□□□□□ -2.23
UBR4-217ENST00000497018 HIST1H2BJP06899 126 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 KRTAP1-4P0C5Y4 121 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 SMIM6P0DI80 62 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 FABP2P12104 132 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 RPL35P42766 123 aaKnown RBP1.13□□□□□ -2.23
UBR4-217ENST00000497018 RPL28P46779 137 aaKnown RBP1.13□□□□□ -2.23
UBR4-217ENST00000497018 RBP2P50120 134 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 NDUFA6P56556 154 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 COPZ1P61923 177 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 RHOGP84095 191 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 DEFB121Q5J5C9 76 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 BCL2L15Q5TBC7 163 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 SPINK14Q6IE38 97 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 NOXRED1Q6NXP6 359 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 Q6P435 159 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 ZNF880Q6PDB4 577 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 SCIMPQ6UWF3 145 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 GLIPR1L1Q6UWM5 242 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 LYZL1Q6UWQ5 148 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 IGFL3Q6UXB1 125 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 CTAGE3PQ8IX95 158 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 Q8N2B8 174 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 LINC00311Q8N616 119 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 MORN4Q8NDC4 146 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 OR5A2Q8NGI9 324 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 SCGB3A1Q96QR1 104 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 TCEAL7Q9BRU2 100 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 ADAT1Q9BUB4 502 aaKnown RBP1.13□□□□□ -2.23
UBR4-217ENST00000497018 NPCDR1Q9BY65 106 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 KRTAP4-7Q9BYR0 210 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 REG4Q9BYZ8 158 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 RPS10P5Q9NQ39 176 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 GNG8Q9UK08 70 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 CCL26Q9Y258 94 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 SMAD5-AS1Q9Y6J3 95 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 U3KQA8 63 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 MYH9P35579 1960 aaKnown RBP1.13□□□□□ -2.23
UBR4-217ENST00000497018 ARHGAP21Q5T5U3 1957 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 SCN1AP35498 2009 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 DSPPQ9NZW4 1301 aa1.13□□□□□ -2.23
UBR4-217ENST00000497018 TRIP11Q15643 1979 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 EML6Q6ZMW3 1958 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 TRAV7A0A075B6U4 112 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 B4DSR2 109 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 ZNF670-ZNF695F2Z2N8 137 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 J3QR89 54 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 SLC22A1O15245 554 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 PITX3O75364 302 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 GAS8-AS1O95177 125 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 STATHP02808 62 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 SHBGP04278 402 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 TCRAP04437 139 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 MSMBP08118 114 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 CCL4P13236 92 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 ZNF14P17017 642 aaPredicted RBP1.12□□□□□ -2.23
UBR4-217ENST00000497018 DYNLT1P63172 113 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 EBI3Q14213 229 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 DEFB133Q30KQ1 61 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 TMEM155Q4W5P6 130 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms