RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ZNF25P17030 456 aaPredicted RBP9.74□□□□□ -0.85
GARNL3-220ENST00000496711 OR1N2Q8NGR9 330 aa9.74□□□□□ -0.85
GARNL3-220ENST00000496711 TRAV12-3A0A0B4J271 114 aa9.74□□□□□ -0.85
GARNL3-220ENST00000496711 G0S2P27469 103 aa9.74□□□□□ -0.85
GARNL3-220ENST00000496711 ANKRD39Q53RE8 183 aa9.74□□□□□ -0.85
GARNL3-220ENST00000496711 TEX29Q8N6K0 151 aa9.74□□□□□ -0.85
GARNL3-220ENST00000496711 WFDC12Q8WWY7 111 aa9.74□□□□□ -0.85
GARNL3-220ENST00000496711 ATP5LO75964 103 aa9.73□□□□□ -0.85
GARNL3-220ENST00000496711 SLURP1P55000 103 aa9.73□□□□□ -0.85
GARNL3-220ENST00000496711 SUMO2P61956 95 aaKnown RBP9.73□□□□□ -0.85
GARNL3-220ENST00000496711 TMEM86BQ8N661 226 aa9.73□□□□□ -0.85
GARNL3-220ENST00000496711 RASL10AQ92737 203 aa9.73□□□□□ -0.85
GARNL3-220ENST00000496711 C20orf78Q9BR46 151 aa9.73□□□□□ -0.85
GARNL3-220ENST00000496711 DUSP14O95147 198 aaKnown RBP9.72□□□□□ -0.85
GARNL3-220ENST00000496711 CD7P09564 240 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 SMIM17P0DL12 118 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 ODF1Q14990 250 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 DEFB136Q30KP8 78 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 TCTEX1D4Q5JR98 221 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 C18orf65Q6ZTR6 163 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 WFDC11Q8NEX6 87 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 DKK2Q9UBU2 259 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 MXRA5Q9NR99 2828 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 LINC01619G3V211 115 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 IGKV3-20P01619 116 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 PRSS1P07477 247 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 CDKN1BP46527 198 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 MPV17L2Q567V2 206 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 ADAMTSL5Q6ZMM2 481 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 FOXI2Q6ZQN5 318 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 POM121L12Q8N7R1 296 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 C4orf3Q8WVX3 66 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 RPL39LQ96EH5 51 aaKnown RBP9.72□□□□□ -0.85
GARNL3-220ENST00000496711 TMEM208Q9BTX3 173 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 APCP25054 2843 aa9.72□□□□□ -0.85
GARNL3-220ENST00000496711 AGRNO00468 2067 aa9.71□□□□□ -0.85
GARNL3-220ENST00000496711 TEX15Q9BXT5 2789 aa9.71□□□□□ -0.85
GARNL3-220ENST00000496711 K7EMI3 77 aa9.71□□□□□ -0.85
GARNL3-220ENST00000496711 PPP1R17O96001 155 aa9.71□□□□□ -0.85
GARNL3-220ENST00000496711 FGF6P10767 208 aa9.71□□□□□ -0.85
GARNL3-220ENST00000496711 ORMDL2Q53FV1 153 aa9.71□□□□□ -0.85
GARNL3-220ENST00000496711 FOXC2Q99958 501 aa9.71□□□□□ -0.85
GARNL3-220ENST00000496711 ITPR3Q14573 2671 aa9.7□□□□□ -0.86
GARNL3-220ENST00000496711 TRAV12-2A0A075B6T6 113 aa9.7□□□□□ -0.86
GARNL3-220ENST00000496711 DLEU1O43261 78 aa9.7□□□□□ -0.86
GARNL3-220ENST00000496711 NUDT3O95989 172 aa9.7□□□□□ -0.86
GARNL3-220ENST00000496711 SPINK13Q1W4C9 94 aa9.7□□□□□ -0.86
GARNL3-220ENST00000496711 C12orf54Q6X4T0 127 aa9.7□□□□□ -0.86
GARNL3-220ENST00000496711 C2orf91Q6ZV80 131 aa9.7□□□□□ -0.86
GARNL3-220ENST00000496711 ZMAT4Q9H898 229 aa9.7□□□□□ -0.86
GARNL3-220ENST00000496711 PEMTQ9UBM1 199 aa9.7□□□□□ -0.86
GARNL3-220ENST00000496711 KIF25-AS1Q9Y6Z4 181 aa9.7□□□□□ -0.86
GARNL3-220ENST00000496711 GAGE1Q13065 139 aa9.7□□□□□ -0.86
GARNL3-220ENST00000496711 KHDC1LQ5JSQ8 128 aa9.7□□□□□ -0.86
GARNL3-220ENST00000496711 BVES-AS1Q5T3Y7 98 aa9.7□□□□□ -0.86
GARNL3-220ENST00000496711 OR11H1Q8NG94 326 aa9.7□□□□□ -0.86
GARNL3-220ENST00000496711 C9orf85Q96MD7 179 aa9.7□□□□□ -0.86
GARNL3-220ENST00000496711 IGHV3-16A0A0C4DH30 117 aa9.69□□□□□ -0.86
GARNL3-220ENST00000496711 BOD1L2Q8IYS8 172 aa9.69□□□□□ -0.86
GARNL3-220ENST00000496711 IGHV1OR15-1A0A075B7D0 117 aa9.68□□□□□ -0.86
GARNL3-220ENST00000496711 DNAJC9-AS1A6NH13 148 aa9.68□□□□□ -0.86
GARNL3-220ENST00000496711 IGKCP01834 107 aa9.68□□□□□ -0.86
GARNL3-220ENST00000496711 LINC00315P59091 139 aa9.68□□□□□ -0.86
GARNL3-220ENST00000496711 AMTNQ6UX39 209 aa9.68□□□□□ -0.86
GARNL3-220ENST00000496711 OR9G4Q8NGQ1 327 aa9.68□□□□□ -0.86
GARNL3-220ENST00000496711 TRAV2A0A0B4J234 112 aa9.68□□□□□ -0.86
GARNL3-220ENST00000496711 DPM2O94777 84 aa9.68□□□□□ -0.86
GARNL3-220ENST00000496711 TCTAP57738 103 aa9.68□□□□□ -0.86
GARNL3-220ENST00000496711 Q6ZSV7 163 aa9.68□□□□□ -0.86
GARNL3-220ENST00000496711 SYT8Q8NBV8 401 aa9.68□□□□□ -0.86
GARNL3-220ENST00000496711 KLHL30-AS1Q8NEE0 82 aa9.68□□□□□ -0.86
GARNL3-220ENST00000496711 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.67□□□□□ -0.86
GARNL3-220ENST00000496711 NMUP48645 174 aa9.67□□□□□ -0.86
GARNL3-220ENST00000496711 HIST2H2BCQ6DN03 193 aa9.67□□□□□ -0.86
GARNL3-220ENST00000496711 SUMO4Q6EEV6 95 aa9.67□□□□□ -0.86
GARNL3-220ENST00000496711 Q8N1Y9 231 aa9.67□□□□□ -0.86
GARNL3-220ENST00000496711 TOMM6Q96B49 74 aa9.67□□□□□ -0.86
GARNL3-220ENST00000496711 DUX3Q96PT4 197 aa9.67□□□□□ -0.86
GARNL3-220ENST00000496711 RPL32P62910 135 aaKnown RBP9.66□□□□□ -0.86
GARNL3-220ENST00000496711 ORAOV1Q8WV07 137 aa9.66□□□□□ -0.86
GARNL3-220ENST00000496711 CSTL1Q9H114 145 aa9.66□□□□□ -0.86
GARNL3-220ENST00000496711 JPT2Q9H910 190 aa9.66□□□□□ -0.86
GARNL3-220ENST00000496711 MDFICQ9P1T7 246 aa9.66□□□□□ -0.86
GARNL3-220ENST00000496711 HHLA3Q9XRX5 114 aa9.66□□□□□ -0.86
GARNL3-220ENST00000496711 COX11Q9Y6N1 276 aa9.66□□□□□ -0.86
GARNL3-220ENST00000496711 A0A087WWL8 130 aa9.66□□□□□ -0.86
GARNL3-220ENST00000496711 A0A087WX48 190 aa9.66□□□□□ -0.86
GARNL3-220ENST00000496711 HLA-DRB4P13762 266 aa9.66□□□□□ -0.86
GARNL3-220ENST00000496711 DEFB131AP59861 70 aa9.66□□□□□ -0.86
GARNL3-220ENST00000496711 TMEM61Q8N0U2 210 aa9.66□□□□□ -0.86
GARNL3-220ENST00000496711 DYNLRB2Q8TF09 96 aa9.66□□□□□ -0.86
GARNL3-220ENST00000496711 MRPL35Q9NZE8 188 aaKnown RBP9.66□□□□□ -0.86
GARNL3-220ENST00000496711 HLA-DRB4X5D2U9 266 aa9.66□□□□□ -0.86
GARNL3-220ENST00000496711 TRGV11A0A075B6L2 103 aa9.65□□□□□ -0.86
GARNL3-220ENST00000496711 TRAV12-1A0A0B4J245 112 aa9.65□□□□□ -0.86
GARNL3-220ENST00000496711 KNCNA6PVL3 124 aa9.65□□□□□ -0.86
GARNL3-220ENST00000496711 A8MTW9 85 aa9.65□□□□□ -0.86
GARNL3-220ENST00000496711 SIVA1O15304 175 aa9.65□□□□□ -0.86
GARNL3-220ENST00000496711 PLA2G2AP14555 144 aa9.65□□□□□ -0.86
GARNL3-220ENST00000496711 DLX4Q92988 240 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms