RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 RUSC1-AS1Q66K80 236 aa7□□□□□ -1.29
HPS4-217ENST00000496385 HIST2H2BCQ6DN03 193 aa7□□□□□ -1.29
HPS4-217ENST00000496385 SFTA2Q6UW10 78 aa7□□□□□ -1.29
HPS4-217ENST00000496385 C3orf22Q8N5N4 141 aa7□□□□□ -1.29
HPS4-217ENST00000496385 LINC00311Q8N616 119 aa7□□□□□ -1.29
HPS4-217ENST00000496385 PSMG3-AS1Q96PY0 264 aa7□□□□□ -1.29
HPS4-217ENST00000496385 SCGB3A1Q96QR1 104 aa7□□□□□ -1.29
HPS4-217ENST00000496385 LINC00694P0DN24 101 aa6.99□□□□□ -1.29
HPS4-217ENST00000496385 C17orf77Q96MU5 243 aa6.99□□□□□ -1.29
HPS4-217ENST00000496385 MSRB1Q9NZV6 116 aa6.99□□□□□ -1.29
HPS4-217ENST00000496385 TACC2O95359 2948 aa6.99□□□□□ -1.29
HPS4-217ENST00000496385 PTPN13Q12923 2485 aa6.99□□□□□ -1.29
HPS4-217ENST00000496385 LRBAP50851 2863 aa6.99□□□□□ -1.29
HPS4-217ENST00000496385 MBD3L4A6NDZ8 208 aaPredicted RBP6.99□□□□□ -1.29
HPS4-217ENST00000496385 MBD3L3A6NE82 208 aaPredicted RBP6.99□□□□□ -1.29
HPS4-217ENST00000496385 MBD3L5A6NJ08 208 aaPredicted RBP6.99□□□□□ -1.29
HPS4-217ENST00000496385 H3BT86 120 aa6.99□□□□□ -1.29
HPS4-217ENST00000496385 GAS8-AS1O95177 125 aa6.99□□□□□ -1.29
HPS4-217ENST00000496385 ACYP1P07311 99 aa6.99□□□□□ -1.29
HPS4-217ENST00000496385 PF4V1P10720 104 aa6.99□□□□□ -1.29
HPS4-217ENST00000496385 HCP5Q6MZN7 132 aa6.99□□□□□ -1.29
HPS4-217ENST00000496385 ZNF575Q86XF7 245 aa6.99□□□□□ -1.29
HPS4-217ENST00000496385 MBD3L2Q8NHZ7 208 aaPredicted RBP6.99□□□□□ -1.29
HPS4-217ENST00000496385 ITLN2Q8WWU7 325 aaPredicted RBP6.99□□□□□ -1.29
HPS4-217ENST00000496385 PLEKHB2Q96CS7 222 aa6.99□□□□□ -1.29
HPS4-217ENST00000496385 ASCL2Q99929 193 aa6.99□□□□□ -1.29
HPS4-217ENST00000496385 PRR14LQ5THK1 2151 aa6.98□□□□□ -1.29
HPS4-217ENST00000496385 M0R3E3 92 aa6.98□□□□□ -1.29
HPS4-217ENST00000496385 NPFFO15130 113 aa6.98□□□□□ -1.29
HPS4-217ENST00000496385 IGHV3-33P01772 117 aa6.98□□□□□ -1.29
HPS4-217ENST00000496385 GATA4P43694 442 aa6.98□□□□□ -1.29
HPS4-217ENST00000496385 EBI3Q14213 229 aa6.98□□□□□ -1.29
HPS4-217ENST00000496385 TMEM170BQ5T4T1 132 aa6.98□□□□□ -1.29
HPS4-217ENST00000496385 LINC00526Q96FQ7 95 aa6.98□□□□□ -1.29
HPS4-217ENST00000496385 IGHV4-4A0A075B6R2 117 aa6.98□□□□□ -1.29
HPS4-217ENST00000496385 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.98□□□□□ -1.29
HPS4-217ENST00000496385 ERCC8Q13216 396 aa6.98□□□□□ -1.29
HPS4-217ENST00000496385 MRGPRG-AS1Q2M3A8 158 aa6.98□□□□□ -1.29
HPS4-217ENST00000496385 Q6ZT83 130 aa6.98□□□□□ -1.29
HPS4-217ENST00000496385 SMIM2Q9BVW6 85 aa6.98□□□□□ -1.29
HPS4-217ENST00000496385 NBPF19A0A087WUL8 3843 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 TRBV30A0A0K0K1B3 111 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 IGKV1-17P01599 117 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 ORM1P02763 201 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 TMEM155Q4W5P6 130 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 C9orf153Q5TBE3 101 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 TMEM219Q86XT9 240 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 CHCHD5Q9BSY4 110 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 FLNBO75369 2602 aaKnown RBP6.97□□□□□ -1.29
HPS4-217ENST00000496385 C19orf84I3L1E1 186 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 I3L2K1 104 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 IGLV1-44P01699 117 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 GATA1P15976 413 aaPredicted RBP6.97□□□□□ -1.29
HPS4-217ENST00000496385 EFNA4P52798 201 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 ZNF491Q8N8L2 437 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 RNF125Q96EQ8 232 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 GAFA1Q96PS6 74 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 RNF7Q9UBF6 113 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 CECR9P0C854 216 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 CRIP2P52943 208 aaPredicted RBP6.97□□□□□ -1.29
HPS4-217ENST00000496385 TEX36Q5VZQ5 186 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 SLC50A1Q9BRV3 221 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 PKDREJQ9NTG1 2253 aa6.97□□□□□ -1.29
HPS4-217ENST00000496385 TEX49A0A1B0GTD5 131 aa6.96□□□□□ -1.3
HPS4-217ENST00000496385 ZNF80P51504 273 aaPredicted RBP6.96□□□□□ -1.3
HPS4-217ENST00000496385 FAM27E3Q08E93 113 aa6.96□□□□□ -1.3
HPS4-217ENST00000496385 FAM201AQ5SY85 155 aa6.96□□□□□ -1.3
HPS4-217ENST00000496385 TMEM263Q8WUH6 116 aaKnown RBP6.96□□□□□ -1.3
HPS4-217ENST00000496385 IGHV1-69DA0A0B4J2H0 117 aa6.96□□□□□ -1.3
HPS4-217ENST00000496385 B9A039 149 aa6.96□□□□□ -1.3
HPS4-217ENST00000496385 LYZL6O75951 148 aa6.96□□□□□ -1.3
HPS4-217ENST00000496385 CRYGBP07316 175 aa6.96□□□□□ -1.3
HPS4-217ENST00000496385 RPL7P18124 248 aaKnown RBP6.96□□□□□ -1.3
HPS4-217ENST00000496385 TNFAIP6P98066 277 aaPredicted RBP6.96□□□□□ -1.3
HPS4-217ENST00000496385 ZNF474Q6S9Z5 364 aaPredicted RBP6.96□□□□□ -1.3
HPS4-217ENST00000496385 FAM19A5Q7Z5A7 132 aaPredicted RBP6.96□□□□□ -1.3
HPS4-217ENST00000496385 TRPT1Q86TN4 253 aaKnown RBP6.96□□□□□ -1.3
HPS4-217ENST00000496385 POM121L12Q8N7R1 296 aa6.96□□□□□ -1.3
HPS4-217ENST00000496385 CSMD2Q7Z408 3487 aa6.95□□□□□ -1.3
HPS4-217ENST00000496385 GLRXP35754 106 aa6.95□□□□□ -1.3
HPS4-217ENST00000496385 ZNRF2Q8NHG8 242 aa6.95□□□□□ -1.3
HPS4-217ENST00000496385 SETXQ7Z333 2677 aaKnown RBP6.95□□□□□ -1.3
HPS4-217ENST00000496385 RBAKDNA6NC62 111 aa6.95□□□□□ -1.3
HPS4-217ENST00000496385 HERVK_113P63121 156 aa6.95□□□□□ -1.3
HPS4-217ENST00000496385 ZNF56Q15929 161 aa6.95□□□□□ -1.3
HPS4-217ENST00000496385 UBTD1Q9HAC8 227 aa6.95□□□□□ -1.3
HPS4-217ENST00000496385 HRNRQ86YZ3 2850 aaPredicted RBP6.95□□□□□ -1.3
HPS4-217ENST00000496385 PPP1R17O96001 155 aa6.94□□□□□ -1.3
HPS4-217ENST00000496385 CD3EP07766 207 aa6.94□□□□□ -1.3
HPS4-217ENST00000496385 C2orf82Q6UX34 121 aa6.94□□□□□ -1.3
HPS4-217ENST00000496385 C22orf34Q6ZV56 151 aa6.94□□□□□ -1.3
HPS4-217ENST00000496385 DSCAMO60469 2012 aa6.94□□□□□ -1.3
HPS4-217ENST00000496385 ANKHD1Q8IWZ3 2542 aaKnown RBP6.94□□□□□ -1.3
HPS4-217ENST00000496385 IGKV2-40A0A087WW87 121 aaPredicted RBP6.94□□□□□ -1.3
HPS4-217ENST00000496385 C11orf86A6NJI1 115 aa6.94□□□□□ -1.3
HPS4-217ENST00000496385 IGKV2D-40P01614 121 aaPredicted RBP6.94□□□□□ -1.3
HPS4-217ENST00000496385 LINC01560Q8TB33 94 aa6.94□□□□□ -1.3
HPS4-217ENST00000496385 NAV3Q8IVL0 2385 aa6.93□□□□□ -1.3
HPS4-217ENST00000496385 TEX22C9J3V5 150 aa6.93□□□□□ -1.3
HPS4-217ENST00000496385 TGFAP01135 160 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms