RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 FGF8P55075 233 aaPredicted RBP5.09□□□□□ -1.59
GARNL3-219ENST00000495172 REG3AQ06141 175 aa5.09□□□□□ -1.59
GARNL3-219ENST00000495172 RNASE10Q5GAN6 216 aaKnown RBP5.09□□□□□ -1.59
GARNL3-219ENST00000495172 UFSP1Q6NVU6 142 aa5.09□□□□□ -1.59
GARNL3-219ENST00000495172 SAMD12Q8N8I0 201 aa5.09□□□□□ -1.59
GARNL3-219ENST00000495172 ASB13Q8WXK3 278 aa5.09□□□□□ -1.59
GARNL3-219ENST00000495172 RPP21Q9H633 154 aaKnown RBP5.09□□□□□ -1.59
GARNL3-219ENST00000495172 ZNF561-AS1K7EIQ3 104 aa5.08□□□□□ -1.6
GARNL3-219ENST00000495172 UBE2D3P61077 147 aa5.08□□□□□ -1.6
GARNL3-219ENST00000495172 UBE2D2P62837 147 aa5.08□□□□□ -1.6
GARNL3-219ENST00000495172 GAGE2BQ13066 116 aa5.08□□□□□ -1.6
GARNL3-219ENST00000495172 KRTAP6-3Q3LI67 103 aa5.08□□□□□ -1.6
GARNL3-219ENST00000495172 UBE2NLQ5JXB2 153 aa5.08□□□□□ -1.6
GARNL3-219ENST00000495172 LINC00173Q6ZV60 143 aa5.08□□□□□ -1.6
GARNL3-219ENST00000495172 TERB2Q8NHR7 220 aa5.08□□□□□ -1.6
GARNL3-219ENST00000495172 TVP23CQ96ET8 276 aa5.08□□□□□ -1.6
GARNL3-219ENST00000495172 MGST2Q99735 147 aa5.08□□□□□ -1.6
GARNL3-219ENST00000495172 PRELID1Q9Y255 219 aa5.08□□□□□ -1.6
GARNL3-219ENST00000495172 C9orf118A6NHY6 69 aa5.07□□□□□ -1.6
GARNL3-219ENST00000495172 CIDEAO60543 219 aa5.07□□□□□ -1.6
GARNL3-219ENST00000495172 EIF5AP63241 154 aaKnown RBP5.07□□□□□ -1.6
GARNL3-219ENST00000495172 LGALSLQ3ZCW2 172 aaPredicted RBP5.07□□□□□ -1.6
GARNL3-219ENST00000495172 FAM74A4Q5TZK3 123 aa5.07□□□□□ -1.6
GARNL3-219ENST00000495172 MIC13Q5XKP0 118 aa5.07□□□□□ -1.6
GARNL3-219ENST00000495172 NTM-AS1Q6ZSK4 140 aa5.07□□□□□ -1.6
GARNL3-219ENST00000495172 S100A7AQ86SG5 101 aa5.07□□□□□ -1.6
GARNL3-219ENST00000495172 BCL7BQ9BQE9 202 aa5.07□□□□□ -1.6
GARNL3-219ENST00000495172 C14orf166Q9Y224 244 aaKnown RBP5.07□□□□□ -1.6
GARNL3-219ENST00000495172 A0A087WZ39 114 aa5.06□□□□□ -1.6
GARNL3-219ENST00000495172 GAGE12HA6NDE8 117 aa5.06□□□□□ -1.6
GARNL3-219ENST00000495172 K7EPK0 472 aa5.06□□□□□ -1.6
GARNL3-219ENST00000495172 SYNGR2O43760 224 aa5.06□□□□□ -1.6
GARNL3-219ENST00000495172 RNASE3P12724 160 aaKnown RBP5.06□□□□□ -1.6
GARNL3-219ENST00000495172 ARL16Q0P5N6 197 aa5.06□□□□□ -1.6
GARNL3-219ENST00000495172 C9orf116Q5BN46 136 aaPredicted RBP5.06□□□□□ -1.6
GARNL3-219ENST00000495172 PRSS48Q7RTY5 328 aa5.06□□□□□ -1.6
GARNL3-219ENST00000495172 PHYHIPLQ96FC7 376 aa5.06□□□□□ -1.6
GARNL3-219ENST00000495172 ATP5SQ99766 215 aa5.06□□□□□ -1.6
GARNL3-219ENST00000495172 AAMDCQ9H7C9 122 aa5.06□□□□□ -1.6
GARNL3-219ENST00000495172 ANAPC11Q9NYG5 84 aa5.06□□□□□ -1.6
GARNL3-219ENST00000495172 CCDC59Q9P031 241 aaKnown RBP5.06□□□□□ -1.6
GARNL3-219ENST00000495172 LINC00474Q9P2X8 69 aa5.06□□□□□ -1.6
GARNL3-219ENST00000495172 STRAPQ9Y3F4 350 aaKnown RBP5.06□□□□□ -1.6
GARNL3-219ENST00000495172 A0A0B4J2A0 478 aa5.05□□□□□ -1.6
GARNL3-219ENST00000495172 METTL15P1P0C7V9 234 aa5.05□□□□□ -1.6
GARNL3-219ENST00000495172 ZNF80P51504 273 aaPredicted RBP5.05□□□□□ -1.6
GARNL3-219ENST00000495172 PTTG1IPP53801 180 aa5.05□□□□□ -1.6
GARNL3-219ENST00000495172 SPCS2Q15005 226 aa5.05□□□□□ -1.6
GARNL3-219ENST00000495172 ZFP2Q6ZN57 461 aa5.05□□□□□ -1.6
GARNL3-219ENST00000495172 C20orf203Q8NBC4 194 aa5.05□□□□□ -1.6
GARNL3-219ENST00000495172 OR51S1Q8NGJ8 323 aa5.05□□□□□ -1.6
GARNL3-219ENST00000495172 NAA50Q9GZZ1 169 aaKnown RBP5.05□□□□□ -1.6
GARNL3-219ENST00000495172 GPN1Q9HCN4 374 aaPredicted RBP5.05□□□□□ -1.6
GARNL3-219ENST00000495172 SLC39A9Q9NUM3 307 aa5.05□□□□□ -1.6
GARNL3-219ENST00000495172 CACFD1Q9UGQ2 172 aa5.05□□□□□ -1.6
GARNL3-219ENST00000495172 SHPKQ9UHJ6 478 aa5.05□□□□□ -1.6
GARNL3-219ENST00000495172 RNF24Q9Y225 148 aa5.05□□□□□ -1.6
GARNL3-219ENST00000495172 TPRKBQ9Y3C4 175 aa5.05□□□□□ -1.6
GARNL3-219ENST00000495172 IGLV4-60A0A075B6I1 120 aa5.04□□□□□ -1.6
GARNL3-219ENST00000495172 LOC100506127A0A0U1RQW1 187 aa5.04□□□□□ -1.6
GARNL3-219ENST00000495172 GCSAMLQ5JQS6 135 aa5.04□□□□□ -1.6
GARNL3-219ENST00000495172 PXDC1Q5TGL8 231 aa5.04□□□□□ -1.6
GARNL3-219ENST00000495172 TYMSOSQ8TAI1 123 aa5.04□□□□□ -1.6
GARNL3-219ENST00000495172 NPVFQ9HCQ7 196 aa5.04□□□□□ -1.6
GARNL3-219ENST00000495172 COMMD3Q9UBI1 195 aa5.04□□□□□ -1.6
GARNL3-219ENST00000495172 TRAV21A0A0B4J279 112 aa5.03□□□□□ -1.6
GARNL3-219ENST00000495172 TRBV7-9A0A0J9YWB2 115 aa5.03□□□□□ -1.6
GARNL3-219ENST00000495172 EIF3GO75821 320 aaKnown RBP eCLIP5.03□□□□□ -1.6
GARNL3-219ENST00000495172 BCL2P10415 239 aa5.03□□□□□ -1.6
GARNL3-219ENST00000495172 SEC61BP60468 96 aaKnown RBP5.03□□□□□ -1.6
GARNL3-219ENST00000495172 KRTAP13-3Q3SY46 172 aa5.03□□□□□ -1.6
GARNL3-219ENST00000495172 LINC00337Q8N6G1 96 aa5.03□□□□□ -1.6
GARNL3-219ENST00000495172 NUDT10Q8NFP7 164 aa5.03□□□□□ -1.6
GARNL3-219ENST00000495172 NUDT11Q96G61 164 aa5.03□□□□□ -1.6
GARNL3-219ENST00000495172 DIRAS2Q96HU8 199 aa5.03□□□□□ -1.6
GARNL3-219ENST00000495172 SGK494Q96LW2 274 aa5.03□□□□□ -1.6
GARNL3-219ENST00000495172 GPR132Q9UNW8 380 aa5.03□□□□□ -1.6
GARNL3-219ENST00000495172 CARHSP1Q9Y2V2 147 aaKnown RBP5.03□□□□□ -1.6
GARNL3-219ENST00000495172 IGKV3OR2-268A0A0C4DH90 116 aa5.02□□□□□ -1.61
GARNL3-219ENST00000495172 A8MWV9 139 aa5.02□□□□□ -1.61
GARNL3-219ENST00000495172 RAB3DO95716 219 aa5.02□□□□□ -1.61
GARNL3-219ENST00000495172 MBPP02686 304 aaPredicted RBP5.02□□□□□ -1.61
GARNL3-219ENST00000495172 RAB2AP61019 212 aa5.02□□□□□ -1.61
GARNL3-219ENST00000495172 RPP30P78346 268 aaKnown RBP5.02□□□□□ -1.61
GARNL3-219ENST00000495172 SS18Q15532 418 aa5.02□□□□□ -1.61
GARNL3-219ENST00000495172 CIB3Q96Q77 187 aaPredicted RBP5.02□□□□□ -1.61
GARNL3-219ENST00000495172 SLC25A2Q9BXI2 301 aa5.02□□□□□ -1.61
GARNL3-219ENST00000495172 PSENENQ9NZ42 101 aa5.02□□□□□ -1.61
GARNL3-219ENST00000495172 TRBV7-3A0A075B6L6 115 aa5.01□□□□□ -1.61
GARNL3-219ENST00000495172 GVQW2A0A096LPI5 108 aaPredicted RBP5.01□□□□□ -1.61
GARNL3-219ENST00000495172 FAM168BA1KXE4 195 aa5.01□□□□□ -1.61
GARNL3-219ENST00000495172 RPL36AP83881 106 aaKnown RBP5.01□□□□□ -1.61
GARNL3-219ENST00000495172 PDE6HQ13956 83 aa5.01□□□□□ -1.61
GARNL3-219ENST00000495172 KRTAP13-2Q52LG2 175 aa5.01□□□□□ -1.61
GARNL3-219ENST00000495172 PACRGLQ8N7B6 248 aa5.01□□□□□ -1.61
GARNL3-219ENST00000495172 RPL36ALQ969Q0 106 aaKnown RBP5.01□□□□□ -1.61
GARNL3-219ENST00000495172 CARD19Q96LW7 228 aa5.01□□□□□ -1.61
GARNL3-219ENST00000495172 HYLS1Q96M11 299 aa5.01□□□□□ -1.61
GARNL3-219ENST00000495172 TMEM14CQ9P0S9 112 aa5.01□□□□□ -1.61
GARNL3-219ENST00000495172 SSSCA1O60232 199 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms