RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 FAM104BQ5XKR9 115 aa14.01□□□□□ -0.17
TSPAN4-212ENST00000494815 GTF2H5Q6ZYL4 71 aa14.01□□□□□ -0.17
TSPAN4-212ENST00000494815 PRELID3AQ96N28 172 aa14.01□□□□□ -0.17
TSPAN4-212ENST00000494815 LOC389332A0A1B0GUA5 103 aa14□□□□□ -0.17
TSPAN4-212ENST00000494815 A0A1B0GV72 72 aa14□□□□□ -0.17
TSPAN4-212ENST00000494815 RPL11P62913 178 aaKnown RBP14□□□□□ -0.17
TSPAN4-212ENST00000494815 ORMDL3Q8N138 153 aa14□□□□□ -0.17
TSPAN4-212ENST00000494815 OR9G4Q8NGQ1 327 aa14□□□□□ -0.17
TSPAN4-212ENST00000494815 AP1S3Q96PC3 154 aa14□□□□□ -0.17
TSPAN4-212ENST00000494815 HOXD3P31249 432 aaPredicted RBP14□□□□□ -0.17
TSPAN4-212ENST00000494815 LYZL1Q6UWQ5 148 aa14□□□□□ -0.17
TSPAN4-212ENST00000494815 C9orf47Q6ZRZ4 202 aa14□□□□□ -0.17
TSPAN4-212ENST00000494815 SIVA1O15304 175 aa13.99□□□□□ -0.17
TSPAN4-212ENST00000494815 SRD5A1P18405 259 aa13.99□□□□□ -0.17
TSPAN4-212ENST00000494815 HSD52Q0P140 79 aa13.99□□□□□ -0.17
TSPAN4-212ENST00000494815 TMEM78Q5T7P6 136 aa13.99□□□□□ -0.17
TSPAN4-212ENST00000494815 ZNF418Q8TF45 676 aaPredicted RBP13.99□□□□□ -0.17
TSPAN4-212ENST00000494815 C4orf3Q8WVX3 66 aa13.99□□□□□ -0.17
TSPAN4-212ENST00000494815 MTORP42345 2549 aa13.99□□□□□ -0.17
TSPAN4-212ENST00000494815 HBDP02042 147 aa13.99□□□□□ -0.17
TSPAN4-212ENST00000494815 SYNJ2BPP57105 145 aa13.99□□□□□ -0.17
TSPAN4-212ENST00000494815 CACNG7P62955 275 aa13.99□□□□□ -0.17
TSPAN4-212ENST00000494815 ERCC8Q13216 396 aa13.99□□□□□ -0.17
TSPAN4-212ENST00000494815 AMN1Q8IY45 258 aa13.99□□□□□ -0.17
TSPAN4-212ENST00000494815 AGPAT4-IT1Q9H0P7 198 aa13.99□□□□□ -0.17
TSPAN4-212ENST00000494815 TMEM189A5PLL7 270 aa13.98□□□□□ -0.17
TSPAN4-212ENST00000494815 SH2D1AO60880 128 aa13.98□□□□□ -0.17
TSPAN4-212ENST00000494815 TCTEX1D4Q5JR98 221 aa13.98□□□□□ -0.17
TSPAN4-212ENST00000494815 JMJD8Q96S16 334 aa13.98□□□□□ -0.17
TSPAN4-212ENST00000494815 HIVEP2P31629 2446 aa13.98□□□□□ -0.17
TSPAN4-212ENST00000494815 C20orf173Q96LM9 149 aa13.98□□□□□ -0.17
TSPAN4-212ENST00000494815 OVOL1O14753 267 aa13.97□□□□□ -0.17
TSPAN4-212ENST00000494815 EDN2P20800 178 aa13.97□□□□□ -0.17
TSPAN4-212ENST00000494815 HILS1P60008 231 aa13.97□□□□□ -0.17
TSPAN4-212ENST00000494815 MRPL51Q4U2R6 128 aaKnown RBP13.97□□□□□ -0.17
TSPAN4-212ENST00000494815 K7EP34 96 aa13.96□□□□□ -0.17
TSPAN4-212ENST00000494815 KIR3DS1Q14943 382 aa13.96□□□□□ -0.17
TSPAN4-212ENST00000494815 ADAMTSL5Q6ZMM2 481 aa13.96□□□□□ -0.17
TSPAN4-212ENST00000494815 SMR3AQ99954 134 aa13.96□□□□□ -0.17
TSPAN4-212ENST00000494815 H3BUT2 72 aa13.96□□□□□ -0.18
TSPAN4-212ENST00000494815 NEGR1Q7Z3B1 354 aa13.96□□□□□ -0.18
TSPAN4-212ENST00000494815 IFI27L1Q96BM0 104 aa13.96□□□□□ -0.18
TSPAN4-212ENST00000494815 C16orf95Q9H693 158 aa13.96□□□□□ -0.18
TSPAN4-212ENST00000494815 LENEPQ9Y5L5 61 aa13.96□□□□□ -0.18
TSPAN4-212ENST00000494815 TMSB15BA0A087X1C1 80 aa13.95□□□□□ -0.18
TSPAN4-212ENST00000494815 LINC01619G3V211 115 aa13.95□□□□□ -0.18
TSPAN4-212ENST00000494815 LY6G6DO95868 133 aa13.95□□□□□ -0.18
TSPAN4-212ENST00000494815 SRSF2Q01130 221 aaKnown RBP13.95□□□□□ -0.18
TSPAN4-212ENST00000494815 ID1P41134 155 aa13.95□□□□□ -0.18
TSPAN4-212ENST00000494815 ZNF80P51504 273 aaPredicted RBP13.95□□□□□ -0.18
TSPAN4-212ENST00000494815 C18orf65Q6ZTR6 163 aa13.95□□□□□ -0.18
TSPAN4-212ENST00000494815 DCANP1Q8TF63 244 aa13.95□□□□□ -0.18
TSPAN4-212ENST00000494815 FABP5P3A8MUU1 101 aa13.94□□□□□ -0.18
TSPAN4-212ENST00000494815 KHDC1LQ5JSQ8 128 aa13.94□□□□□ -0.18
TSPAN4-212ENST00000494815 OR10J6PQ8NGY7 276 aa13.94□□□□□ -0.18
TSPAN4-212ENST00000494815 LINC00477Q96M19 166 aa13.94□□□□□ -0.18
TSPAN4-212ENST00000494815 IGKV3-7A0A075B6H7 116 aa13.93□□□□□ -0.18
TSPAN4-212ENST00000494815 AZU1P20160 251 aa13.93□□□□□ -0.18
TSPAN4-212ENST00000494815 FXYD7P58549 80 aa13.93□□□□□ -0.18
TSPAN4-212ENST00000494815 DEFB136Q30KP8 78 aa13.93□□□□□ -0.18
TSPAN4-212ENST00000494815 OTOGQ6ZRI0 2925 aa13.93□□□□□ -0.18
TSPAN4-212ENST00000494815 CKS2P33552 79 aa13.93□□□□□ -0.18
TSPAN4-212ENST00000494815 OR11H1Q8NG94 326 aa13.93□□□□□ -0.18
TSPAN4-212ENST00000494815 OR2K2Q8NGT1 345 aa13.93□□□□□ -0.18
TSPAN4-212ENST00000494815 NPYP01303 97 aa13.92□□□□□ -0.18
TSPAN4-212ENST00000494815 TCTAP57738 103 aa13.92□□□□□ -0.18
TSPAN4-212ENST00000494815 KLHL30-AS1Q8NEE0 82 aa13.92□□□□□ -0.18
TSPAN4-212ENST00000494815 SLURP1P55000 103 aa13.92□□□□□ -0.18
TSPAN4-212ENST00000494815 NMUP48645 174 aa13.91□□□□□ -0.18
TSPAN4-212ENST00000494815 PCP2Q8IVA1 136 aa13.91□□□□□ -0.18
TSPAN4-212ENST00000494815 LINC01006Q8NI28 216 aa13.91□□□□□ -0.18
TSPAN4-212ENST00000494815 PEMTQ9UBM1 199 aa13.91□□□□□ -0.18
TSPAN4-212ENST00000494815 SMKR1H3BMG3 65 aa13.9□□□□□ -0.18
TSPAN4-212ENST00000494815 OR5A1Q8NGJ0 315 aa13.9□□□□□ -0.18
TSPAN4-212ENST00000494815 NAA38Q9BRA0 125 aaKnown RBP13.9□□□□□ -0.18
TSPAN4-212ENST00000494815 NF1P21359 2839 aa13.9□□□□□ -0.18
TSPAN4-212ENST00000494815 TRBV7-9A0A0J9YWB2 115 aa13.9□□□□□ -0.18
TSPAN4-212ENST00000494815 A0A1W2PPM0 123 aa13.9□□□□□ -0.18
TSPAN4-212ENST00000494815 TWIST1Q15672 202 aa13.9□□□□□ -0.18
TSPAN4-212ENST00000494815 LINC01559Q495D7 138 aa13.9□□□□□ -0.18
TSPAN4-212ENST00000494815 IGLC6P0CF74 106 aa13.89□□□□□ -0.19
TSPAN4-212ENST00000494815 RAB37Q96AX2 223 aa13.89□□□□□ -0.19
TSPAN4-212ENST00000494815 DKK2Q9UBU2 259 aa13.89□□□□□ -0.19
TSPAN4-212ENST00000494815 SELENOKQ9Y6D0 94 aa13.89□□□□□ -0.19
TSPAN4-212ENST00000494815 NDUFA7O95182 113 aa13.89□□□□□ -0.19
TSPAN4-212ENST00000494815 SMIM17P0DL12 118 aa13.89□□□□□ -0.19
TSPAN4-212ENST00000494815 PSMG4Q5JS54 123 aa13.89□□□□□ -0.19
TSPAN4-212ENST00000494815 TRAV26-1A0A087WT03 109 aa13.88□□□□□ -0.19
TSPAN4-212ENST00000494815 LINC01546A6NGU7 62 aa13.88□□□□□ -0.19
TSPAN4-212ENST00000494815 K7EQG2 157 aa13.88□□□□□ -0.19
TSPAN4-212ENST00000494815 ORM1P02763 201 aa13.88□□□□□ -0.19
TSPAN4-212ENST00000494815 CRYBA4P53673 196 aa13.88□□□□□ -0.19
TSPAN4-212ENST00000494815 SNRPD3P62318 126 aaKnown RBP13.88□□□□□ -0.19
TSPAN4-212ENST00000494815 SMAGPQ0VAQ4 97 aa13.88□□□□□ -0.19
TSPAN4-212ENST00000494815 GTSF1LQ9H1H1 148 aa13.88□□□□□ -0.19
TSPAN4-212ENST00000494815 SPCS1Q9Y6A9 102 aa13.88□□□□□ -0.19
TSPAN4-212ENST00000494815 WFDC3Q8IUB2 231 aa13.88□□□□□ -0.19
TSPAN4-212ENST00000494815 MAP1LC3AQ9H492 121 aa13.88□□□□□ -0.19
TSPAN4-212ENST00000494815 FLNBO75369 2602 aaKnown RBP13.87□□□□□ -0.19
TSPAN4-212ENST00000494815 FAM19A4Q96LR4 140 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms