RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 RNASE3P12724 160 aaKnown RBP12.17□□□□□ -0.46
HDAC4-211ENST00000494800 SLC51BQ86UW2 128 aa12.17□□□□□ -0.46
HDAC4-211ENST00000494800 SIVA1O15304 175 aa12.16□□□□□ -0.46
HDAC4-211ENST00000494800 SH2D1AO60880 128 aa12.16□□□□□ -0.46
HDAC4-211ENST00000494800 ZNF506Q5JVG8 444 aa12.16□□□□□ -0.46
HDAC4-211ENST00000494800 PIK3CD-AS1Q5SR53 167 aa12.16□□□□□ -0.46
HDAC4-211ENST00000494800 CFAP126Q5VTH2 177 aa12.16□□□□□ -0.46
HDAC4-211ENST00000494800 hCG_2014768A0A024R1R8 64 aa12.15□□□□□ -0.46
HDAC4-211ENST00000494800 TRAV1-1A0A0B4J248 108 aa12.15□□□□□ -0.46
HDAC4-211ENST00000494800 A8MWV9 139 aa12.15□□□□□ -0.46
HDAC4-211ENST00000494800 M0R036 132 aa12.15□□□□□ -0.46
HDAC4-211ENST00000494800 RS1O15537 224 aa12.15□□□□□ -0.46
HDAC4-211ENST00000494800 NXPH4O95158 308 aa12.15□□□□□ -0.46
HDAC4-211ENST00000494800 GATA1P15976 413 aaPredicted RBP12.15□□□□□ -0.46
HDAC4-211ENST00000494800 ZNF674Q2M3X9 581 aa12.15□□□□□ -0.46
HDAC4-211ENST00000494800 LYPD5Q6UWN5 251 aa12.15□□□□□ -0.46
HDAC4-211ENST00000494800 SYT8Q8NBV8 401 aa12.15□□□□□ -0.46
HDAC4-211ENST00000494800 PRADC1Q9BSG0 188 aa12.15□□□□□ -0.46
HDAC4-211ENST00000494800 IL36BQ9NZH7 164 aa12.15□□□□□ -0.46
HDAC4-211ENST00000494800 GNG13Q9P2W3 67 aa12.15□□□□□ -0.46
HDAC4-211ENST00000494800 SCO2A0A1W2PP80 73 aa12.14□□□□□ -0.47
HDAC4-211ENST00000494800 PGPEP1LA6NFU8 196 aa12.14□□□□□ -0.47
HDAC4-211ENST00000494800 KRBOX1C9JBD0 128 aa12.14□□□□□ -0.47
HDAC4-211ENST00000494800 BTF3P20290 206 aaKnown RBP12.14□□□□□ -0.47
HDAC4-211ENST00000494800 SULT1A2P50226 295 aa12.14□□□□□ -0.47
HDAC4-211ENST00000494800 CRIP1P50238 77 aa12.14□□□□□ -0.47
HDAC4-211ENST00000494800 RHOHQ15669 191 aa12.14□□□□□ -0.47
HDAC4-211ENST00000494800 NHLRC2Q8NBF2 726 aa12.14□□□□□ -0.47
HDAC4-211ENST00000494800 DNAH2Q9P225 4427 aa12.13□□□□□ -0.47
HDAC4-211ENST00000494800 HECTD4Q9Y4D8 3996 aa12.13□□□□□ -0.47
HDAC4-211ENST00000494800 TRBV6-4A0A1B0GX49 114 aa12.13□□□□□ -0.47
HDAC4-211ENST00000494800 H3BVH4 76 aa12.13□□□□□ -0.47
HDAC4-211ENST00000494800 IFNA1P01562 189 aa12.13□□□□□ -0.47
HDAC4-211ENST00000494800 MGST1P10620 155 aaKnown RBP12.13□□□□□ -0.47
HDAC4-211ENST00000494800 LINC01559Q495D7 138 aa12.13□□□□□ -0.47
HDAC4-211ENST00000494800 DNLZQ5SXM8 178 aa12.13□□□□□ -0.47
HDAC4-211ENST00000494800 BAGE2Q86Y30 109 aa12.13□□□□□ -0.47
HDAC4-211ENST00000494800 TRAV9-2A0A087WT02 112 aa12.12□□□□□ -0.47
HDAC4-211ENST00000494800 IGHV3-73A0A0B4J1V6 119 aa12.12□□□□□ -0.47
HDAC4-211ENST00000494800 A0A1B0GVY2 172 aa12.12□□□□□ -0.47
HDAC4-211ENST00000494800 ZFP2Q6ZN57 461 aa12.12□□□□□ -0.47
HDAC4-211ENST00000494800 SLC25A29Q8N8R3 303 aa12.12□□□□□ -0.47
HDAC4-211ENST00000494800 PHLDA3Q9Y5J5 127 aa12.12□□□□□ -0.47
HDAC4-211ENST00000494800 GRIFINA4D1Z8 144 aa12.11□□□□□ -0.47
HDAC4-211ENST00000494800 ARMS2P0C7Q2 107 aa12.11□□□□□ -0.47
HDAC4-211ENST00000494800 TMSB15BA0A087X1C1 80 aa12.1□□□□□ -0.47
HDAC4-211ENST00000494800 CCL20P78556 96 aa12.1□□□□□ -0.47
HDAC4-211ENST00000494800 LY96Q9Y6Y9 160 aa12.1□□□□□ -0.47
HDAC4-211ENST00000494800 LOC100131303A0A0U1RQF7 123 aa12.09□□□□□ -0.47
HDAC4-211ENST00000494800 K7EP13 123 aa12.09□□□□□ -0.47
HDAC4-211ENST00000494800 RHODO00212 210 aa12.09□□□□□ -0.47
HDAC4-211ENST00000494800 PDE6DO43924 150 aa12.09□□□□□ -0.47
HDAC4-211ENST00000494800 RPL35P42766 123 aaKnown RBP12.09□□□□□ -0.47
HDAC4-211ENST00000494800 C11orf52Q96A22 123 aa12.09□□□□□ -0.47
HDAC4-211ENST00000494800 KRTAP1-5Q9BYS1 174 aa12.09□□□□□ -0.47
HDAC4-211ENST00000494800 PARLQ9H300 379 aa12.09□□□□□ -0.47
HDAC4-211ENST00000494800 BOLA1Q9Y3E2 137 aa12.09□□□□□ -0.47
HDAC4-211ENST00000494800 EVI2AP22794 236 aa12.08□□□□□ -0.48
HDAC4-211ENST00000494800 TAGLN2P37802 199 aaKnown RBP12.08□□□□□ -0.48
HDAC4-211ENST00000494800 TIRAPP58753 221 aa12.08□□□□□ -0.48
HDAC4-211ENST00000494800 MEF2BQ02080 365 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-211ENST00000494800 PRR27Q6MZM9 219 aa12.08□□□□□ -0.48
HDAC4-211ENST00000494800 ZFP82Q8N141 532 aa12.08□□□□□ -0.48
HDAC4-211ENST00000494800 C9orf62Q8N4C0 152 aa12.08□□□□□ -0.48
HDAC4-211ENST00000494800 MLST8Q9BVC4 326 aa12.08□□□□□ -0.48
HDAC4-211ENST00000494800 FAT2Q9NYQ8 4349 aa12.08□□□□□ -0.48
HDAC4-211ENST00000494800 M0R381 172 aa12.07□□□□□ -0.48
HDAC4-211ENST00000494800 TNP2Q05952 138 aa12.07□□□□□ -0.48
HDAC4-211ENST00000494800 DMRTA1Q5VZB9 504 aa12.07□□□□□ -0.48
HDAC4-211ENST00000494800 TRAV8-6A0A0B4J262 113 aa12.06□□□□□ -0.48
HDAC4-211ENST00000494800 CXCL1P09341 107 aa12.06□□□□□ -0.48
HDAC4-211ENST00000494800 MED14OSP0DP75 135 aa12.06□□□□□ -0.48
HDAC4-211ENST00000494800 SCRT2Q9NQ03 307 aa12.06□□□□□ -0.48
HDAC4-211ENST00000494800 DNAH17Q9UFH2 4485 aa12.05□□□□□ -0.48
HDAC4-211ENST00000494800 BCL2P10415 239 aa12.05□□□□□ -0.48
HDAC4-211ENST00000494800 GNG4P50150 75 aa12.05□□□□□ -0.48
HDAC4-211ENST00000494800 LINC00315P59091 139 aa12.05□□□□□ -0.48
HDAC4-211ENST00000494800 FAM74A4Q5TZK3 123 aa12.05□□□□□ -0.48
HDAC4-211ENST00000494800 NFE4Q86UQ8 179 aa12.05□□□□□ -0.48
HDAC4-211ENST00000494800 WFDC10BQ8IUB3 73 aa12.05□□□□□ -0.48
HDAC4-211ENST00000494800 DAZAP1Q96EP5 407 aaKnown RBP12.05□□□□□ -0.48
HDAC4-211ENST00000494800 SMIM12Q96EX1 92 aa12.05□□□□□ -0.48
HDAC4-211ENST00000494800 VAX2Q9UIW0 290 aa12.05□□□□□ -0.48
HDAC4-211ENST00000494800 CENPWQ5EE01 88 aa12.04□□□□□ -0.48
HDAC4-211ENST00000494800 OR10J3Q5JRS4 329 aa12.04□□□□□ -0.48
HDAC4-211ENST00000494800 C10orf126Q8N4M7 172 aa12.04□□□□□ -0.48
HDAC4-211ENST00000494800 ATP6V0E2Q8NHE4 81 aa12.04□□□□□ -0.48
HDAC4-211ENST00000494800 SFRP2Q96HF1 295 aa12.04□□□□□ -0.48
HDAC4-211ENST00000494800 DERL1Q9BUN8 251 aa12.04□□□□□ -0.48
HDAC4-211ENST00000494800 MED9Q9NWA0 146 aa12.04□□□□□ -0.48
HDAC4-211ENST00000494800 DNAH10OSP0CZ25 163 aa12.03□□□□□ -0.48
HDAC4-211ENST00000494800 BLOC1S1P78537 153 aa12.03□□□□□ -0.48
HDAC4-211ENST00000494800 GTSF1LQ9H1H1 148 aa12.03□□□□□ -0.48
HDAC4-211ENST00000494800 JPT2Q9H910 190 aa12.03□□□□□ -0.48
HDAC4-211ENST00000494800 BIN3Q9NQY0 253 aa12.03□□□□□ -0.48
HDAC4-211ENST00000494800 IGHV3-38A0A0C4DH36 116 aa12.02□□□□□ -0.49
HDAC4-211ENST00000494800 RPL19P84098 196 aaKnown RBP12.02□□□□□ -0.49
HDAC4-211ENST00000494800 UFSP1Q6NVU6 142 aa12.02□□□□□ -0.49
HDAC4-211ENST00000494800 SAMD10Q9BYL1 202 aa12.02□□□□□ -0.49
HDAC4-211ENST00000494800 A0A087WWL8 130 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms