RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ATP6V0E2Q8NHE4 81 aa15.51■□□□□ 0.07
COL27A1-208ENST00000494780 PSMG3Q9BT73 122 aaPredicted RBP15.51■□□□□ 0.07
COL27A1-208ENST00000494780 SUMO1P63165 101 aaKnown RBP15.5■□□□□ 0.07
COL27A1-208ENST00000494780 HAMPP81172 84 aa15.5■□□□□ 0.07
COL27A1-208ENST00000494780 LAGE3Q14657 143 aa15.5■□□□□ 0.07
COL27A1-208ENST00000494780 TMEM75Q8N9X5 138 aa15.5■□□□□ 0.07
COL27A1-208ENST00000494780 EPDR1Q9UM22 224 aa15.5■□□□□ 0.07
COL27A1-208ENST00000494780 A6NHS1 94 aa15.49■□□□□ 0.07
COL27A1-208ENST00000494780 MBP02144 154 aa15.49■□□□□ 0.07
COL27A1-208ENST00000494780 RNASE3P12724 160 aaKnown RBP15.49■□□□□ 0.07
COL27A1-208ENST00000494780 PRNTQ86SH4 94 aa15.49■□□□□ 0.07
COL27A1-208ENST00000494780 CYB561D1Q8N8Q1 229 aa15.49■□□□□ 0.07
COL27A1-208ENST00000494780 TM2D2Q9BX73 214 aa15.49■□□□□ 0.07
COL27A1-208ENST00000494780 SH3BGRL3Q9H299 93 aa15.49■□□□□ 0.07
COL27A1-208ENST00000494780 TMEM167BQ9NRX6 74 aa15.49■□□□□ 0.07
COL27A1-208ENST00000494780 GGTLC3B5MD39 225 aa15.48■□□□□ 0.07
COL27A1-208ENST00000494780 SERF2P84101 59 aa15.48■□□□□ 0.07
COL27A1-208ENST00000494780 SAPCD1Q5SSQ6 148 aa15.48■□□□□ 0.07
COL27A1-208ENST00000494780 Q6ZSN1 163 aa15.48■□□□□ 0.07
COL27A1-208ENST00000494780 CXorf1O96002 111 aa15.47■□□□□ 0.07
COL27A1-208ENST00000494780 ATP6V0CP27449 155 aa15.47■□□□□ 0.07
COL27A1-208ENST00000494780 FLG2Q5D862 2391 aaPredicted RBP15.47■□□□□ 0.07
COL27A1-208ENST00000494780 SRRM2Q9UQ35 2752 aaKnown RBP15.46■□□□□ 0.07
COL27A1-208ENST00000494780 C1QBP02746 253 aa15.46■□□□□ 0.07
COL27A1-208ENST00000494780 PIK3CD-AS1Q5SR53 167 aa15.46■□□□□ 0.07
COL27A1-208ENST00000494780 ZFP2Q6ZN57 461 aa15.46■□□□□ 0.07
COL27A1-208ENST00000494780 AQP10Q96PS8 301 aa15.46■□□□□ 0.07
COL27A1-208ENST00000494780 A8MWV9 139 aa15.45■□□□□ 0.06
COL27A1-208ENST00000494780 ACTR3CQ9C0K3 210 aaPredicted RBP15.45■□□□□ 0.06
COL27A1-208ENST00000494780 PARLQ9H300 379 aa15.45■□□□□ 0.06
COL27A1-208ENST00000494780 TNFSF18Q9UNG2 199 aa15.45■□□□□ 0.06
COL27A1-208ENST00000494780 ALG5Q9Y673 324 aa15.45■□□□□ 0.06
COL27A1-208ENST00000494780 FAM30AQ9NZY2 134 aa15.44■□□□□ 0.06
COL27A1-208ENST00000494780 IGKV3D-20A0A0C4DH25 116 aa15.43■□□□□ 0.06
COL27A1-208ENST00000494780 LINC00694P0DN24 101 aa15.43■□□□□ 0.06
COL27A1-208ENST00000494780 S100A4P26447 101 aaKnown RBP15.43■□□□□ 0.06
COL27A1-208ENST00000494780 MYCBP2O75592 4640 aa15.42■□□□□ 0.06
COL27A1-208ENST00000494780 TRAV8-3A0A0A6YYJ7 113 aa15.42■□□□□ 0.06
COL27A1-208ENST00000494780 A0A1W2PRE2 83 aa15.42■□□□□ 0.06
COL27A1-208ENST00000494780 GAGE12JA6NER3 117 aa15.42■□□□□ 0.06
COL27A1-208ENST00000494780 GAGE1Q13065 139 aa15.42■□□□□ 0.06
COL27A1-208ENST00000494780 GAGE4Q13068 117 aa15.42■□□□□ 0.06
COL27A1-208ENST00000494780 GAGE5Q13069 117 aa15.42■□□□□ 0.06
COL27A1-208ENST00000494780 LGALSLQ3ZCW2 172 aaPredicted RBP15.42■□□□□ 0.06
COL27A1-208ENST00000494780 GAGE13Q4V321 117 aa15.42■□□□□ 0.06
COL27A1-208ENST00000494780 FABP5P3A8MUU1 101 aa15.41■□□□□ 0.06
COL27A1-208ENST00000494780 ASIPP42127 132 aa15.41■□□□□ 0.06
COL27A1-208ENST00000494780 TOR2AQ5JU69 321 aa15.41■□□□□ 0.06
COL27A1-208ENST00000494780 Q8N3U1 123 aa15.41■□□□□ 0.06
COL27A1-208ENST00000494780 WFDC2Q14508 124 aa15.4■□□□□ 0.06
COL27A1-208ENST00000494780 LINC00479Q96M42 142 aa15.4■□□□□ 0.06
COL27A1-208ENST00000494780 ARL2-SNX15V9GYD0 113 aa15.4■□□□□ 0.06
COL27A1-208ENST00000494780 A0A087WWC5 75 aa15.39■□□□□ 0.05
COL27A1-208ENST00000494780 TRAV34A0A0B4J273 112 aa15.39■□□□□ 0.05
COL27A1-208ENST00000494780 FGF8P55075 233 aaPredicted RBP15.39■□□□□ 0.05
COL27A1-208ENST00000494780 UFSP1Q6NVU6 142 aa15.39■□□□□ 0.05
COL27A1-208ENST00000494780 OR2T35Q8NGX2 323 aa15.39■□□□□ 0.05
COL27A1-208ENST00000494780 IL36BQ9NZH7 164 aa15.39■□□□□ 0.05
COL27A1-208ENST00000494780 DAZ4Q86SG3 579 aaKnown RBP15.38■□□□□ 0.05
COL27A1-208ENST00000494780 MED28Q9H204 178 aa15.38■□□□□ 0.05
COL27A1-208ENST00000494780 DAZ3Q9NR90 486 aaKnown RBP15.38■□□□□ 0.05
COL27A1-208ENST00000494780 IFNA7P01567 189 aa15.37■□□□□ 0.05
COL27A1-208ENST00000494780 Q6ZSA8 131 aa15.37■□□□□ 0.05
COL27A1-208ENST00000494780 JPT2Q9H910 190 aa15.37■□□□□ 0.05
COL27A1-208ENST00000494780 COX11Q9Y6N1 276 aa15.37■□□□□ 0.05
COL27A1-208ENST00000494780 B4DEV8 164 aa15.36■□□□□ 0.05
COL27A1-208ENST00000494780 DNLZQ5SXM8 178 aa15.36■□□□□ 0.05
COL27A1-208ENST00000494780 C14orf178Q8N769 122 aaPredicted RBP15.36■□□□□ 0.05
COL27A1-208ENST00000494780 SYT8Q8NBV8 401 aa15.36■□□□□ 0.05
COL27A1-208ENST00000494780 SAMD10Q9BYL1 202 aa15.36■□□□□ 0.05
COL27A1-208ENST00000494780 Q9UF83 564 aa15.36■□□□□ 0.05
COL27A1-208ENST00000494780 DNAH8Q96JB1 4490 aa15.35■□□□□ 0.05
COL27A1-208ENST00000494780 CTXND1A0A1B0GTU2 59 aa15.35■□□□□ 0.05
COL27A1-208ENST00000494780 RHODO00212 210 aa15.35■□□□□ 0.05
COL27A1-208ENST00000494780 PEX7O00628 323 aa15.35■□□□□ 0.05
COL27A1-208ENST00000494780 ZNF726P1Q15940 193 aa15.35■□□□□ 0.05
COL27A1-208ENST00000494780 Q5BKY6 102 aa15.35■□□□□ 0.05
COL27A1-208ENST00000494780 DMRTA1Q5VZB9 504 aa15.35■□□□□ 0.05
COL27A1-208ENST00000494780 RPL7L1Q6DKI1 246 aaKnown RBP15.35■□□□□ 0.05
COL27A1-208ENST00000494780 Q86TA4 180 aa15.35■□□□□ 0.05
COL27A1-208ENST00000494780 INO80EQ8NBZ0 244 aaPredicted RBP15.35■□□□□ 0.05
COL27A1-208ENST00000494780 NKX6-2Q9C056 277 aaPredicted RBP15.35■□□□□ 0.05
COL27A1-208ENST00000494780 BORCS7-ASMTA0A0B4J1R7 106 aa15.34■□□□□ 0.05
COL27A1-208ENST00000494780 H3BVH4 76 aa15.34■□□□□ 0.05
COL27A1-208ENST00000494780 LECT2O14960 151 aa15.34■□□□□ 0.05
COL27A1-208ENST00000494780 PLA2G1BP04054 148 aaKnown RBP15.34■□□□□ 0.05
COL27A1-208ENST00000494780 HIST1H2BAQ96A08 127 aa15.34■□□□□ 0.05
COL27A1-208ENST00000494780 KRBOX1C9JBD0 128 aa15.33■□□□□ 0.04
COL27A1-208ENST00000494780 GIPP09681 153 aaPredicted RBP15.33■□□□□ 0.04
COL27A1-208ENST00000494780 ARMS2P0C7Q2 107 aa15.33■□□□□ 0.04
COL27A1-208ENST00000494780 SEC11BP0C7V7 166 aa15.33■□□□□ 0.04
COL27A1-208ENST00000494780 UBE2G2P60604 165 aa15.33■□□□□ 0.04
COL27A1-208ENST00000494780 RMI2Q96E14 147 aa15.33■□□□□ 0.04
COL27A1-208ENST00000494780 URGCP-MRPS24S4R325 110 aa15.33■□□□□ 0.04
COL27A1-208ENST00000494780 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.32■□□□□ 0.04
COL27A1-208ENST00000494780 PTTG1O95997 202 aa15.32■□□□□ 0.04
COL27A1-208ENST00000494780 CRIP1P50238 77 aa15.32■□□□□ 0.04
COL27A1-208ENST00000494780 COX8CQ7Z4L0 72 aa15.32■□□□□ 0.04
COL27A1-208ENST00000494780 NIT1Q86X76 327 aa15.32■□□□□ 0.04
COL27A1-208ENST00000494780 OR11H4Q8NGC9 324 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms