RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 SFT2D1Q8WV19 159 aa8.21□□□□□ -1.1
SAMM50-205ENST00000493621 WDR61Q9GZS3 305 aaKnown RBP8.21□□□□□ -1.1
SAMM50-205ENST00000493621 KCNIP2Q9NS61 270 aa8.21□□□□□ -1.1
SAMM50-205ENST00000493621 RPH3ALQ9UNE2 315 aa8.21□□□□□ -1.1
SAMM50-205ENST00000493621 CARHSP1Q9Y2V2 147 aaKnown RBP8.21□□□□□ -1.1
SAMM50-205ENST00000493621 KRTAP29-1A8MX34 341 aaPredicted RBP8.2□□□□□ -1.1
SAMM50-205ENST00000493621 TYMSP04818 313 aa8.2□□□□□ -1.1
SAMM50-205ENST00000493621 PFN1P07737 140 aaKnown RBP8.2□□□□□ -1.1
SAMM50-205ENST00000493621 LINC00528Q8N1L1 170 aa8.2□□□□□ -1.1
SAMM50-205ENST00000493621 SLC25A29Q8N8R3 303 aa8.2□□□□□ -1.1
SAMM50-205ENST00000493621 TRAV21A0A0B4J279 112 aa8.19□□□□□ -1.1
SAMM50-205ENST00000493621 FBLL1A6NHQ2 334 aaKnown RBP8.19□□□□□ -1.1
SAMM50-205ENST00000493621 C17orf112F2Z3M2 114 aa8.19□□□□□ -1.1
SAMM50-205ENST00000493621 F6UZH7 168 aa8.19□□□□□ -1.1
SAMM50-205ENST00000493621 WFDC2Q14508 124 aa8.19□□□□□ -1.1
SAMM50-205ENST00000493621 ALKAL2Q6UX46 152 aa8.19□□□□□ -1.1
SAMM50-205ENST00000493621 TMED6Q8WW62 240 aa8.19□□□□□ -1.1
SAMM50-205ENST00000493621 PRADC1Q9BSG0 188 aa8.19□□□□□ -1.1
SAMM50-205ENST00000493621 SDF2L1Q9HCN8 221 aa8.19□□□□□ -1.1
SAMM50-205ENST00000493621 OR5AC2Q9NZP5 309 aa8.19□□□□□ -1.1
SAMM50-205ENST00000493621 IGHV3-73A0A0B4J1V6 119 aa8.18□□□□□ -1.1
SAMM50-205ENST00000493621 KANTRA0A1W2PQU2 76 aa8.18□□□□□ -1.1
SAMM50-205ENST00000493621 TMEM218A2RU14 115 aa8.18□□□□□ -1.1
SAMM50-205ENST00000493621 PGPA6NDG6 321 aa8.18□□□□□ -1.1
SAMM50-205ENST00000493621 FAM74A7A6NL05 159 aa8.18□□□□□ -1.1
SAMM50-205ENST00000493621 ARPC5O15511 151 aa8.18□□□□□ -1.1
SAMM50-205ENST00000493621 EIF3GO75821 320 aaKnown RBP eCLIP8.18□□□□□ -1.1
SAMM50-205ENST00000493621 FAM74A3Q4VXF1 159 aa8.18□□□□□ -1.1
SAMM50-205ENST00000493621 KHDC3LQ587J8 217 aa8.18□□□□□ -1.1
SAMM50-205ENST00000493621 FFAR4Q5NUL3 377 aa8.18□□□□□ -1.1
SAMM50-205ENST00000493621 DNLZQ5SXM8 178 aa8.18□□□□□ -1.1
SAMM50-205ENST00000493621 LELP1Q5T871 98 aa8.18□□□□□ -1.1
SAMM50-205ENST00000493621 Q6ZSA8 131 aa8.18□□□□□ -1.1
SAMM50-205ENST00000493621 CMTM2Q8TAZ6 248 aa8.18□□□□□ -1.1
SAMM50-205ENST00000493621 TM2D2Q9BX73 214 aa8.18□□□□□ -1.1
SAMM50-205ENST00000493621 LECT2O14960 151 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 BCL2L11O43521 198 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 SIX6O95475 246 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 RHOHQ15669 191 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 ZNF876PQ49A33 203 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 LRRC37A5PQ49AS3 106 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 CFAP126Q5VTH2 177 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 GOLT1AQ6ZVE7 132 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 KCNRGQ8N5I3 272 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 DEFB104AQ8WTQ1 72 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 TVP23CQ96ET8 276 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 KCNS1Q96KK3 526 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 ATP5SQ99766 215 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 SEC11CQ9BY50 192 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 NMES1Q9C002 83 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 TREM1Q9NP99 234 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 OTORQ9NRC9 128 aa8.17□□□□□ -1.1
SAMM50-205ENST00000493621 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.16□□□□□ -1.1
SAMM50-205ENST00000493621 TRAV8-1A0A0A6YYK1 113 aa8.16□□□□□ -1.1
SAMM50-205ENST00000493621 TRBV6-4A0A1B0GX49 114 aa8.16□□□□□ -1.1
SAMM50-205ENST00000493621 C1orf196B1AJZ1 125 aa8.16□□□□□ -1.1
SAMM50-205ENST00000493621 H0YIZ8 118 aa8.16□□□□□ -1.1
SAMM50-205ENST00000493621 RS1O15537 224 aa8.16□□□□□ -1.1
SAMM50-205ENST00000493621 TAS2R45P59539 299 aa8.16□□□□□ -1.1
SAMM50-205ENST00000493621 RAB4BP61018 213 aa8.16□□□□□ -1.1
SAMM50-205ENST00000493621 LAGE3Q14657 143 aa8.16□□□□□ -1.1
SAMM50-205ENST00000493621 FAM74A1Q5RGS3 127 aa8.16□□□□□ -1.1
SAMM50-205ENST00000493621 ATRAIDQ6UW56 229 aa8.16□□□□□ -1.1
SAMM50-205ENST00000493621 DPPA3Q6W0C5 159 aa8.16□□□□□ -1.1
SAMM50-205ENST00000493621 Q8N3U1 123 aa8.16□□□□□ -1.1
SAMM50-205ENST00000493621 C15orf54Q8N8G6 183 aa8.16□□□□□ -1.1
SAMM50-205ENST00000493621 ATP6V0E2Q8NHE4 81 aa8.16□□□□□ -1.1
SAMM50-205ENST00000493621 GTSF1LQ9H1H1 148 aa8.16□□□□□ -1.1
SAMM50-205ENST00000493621 FXYD6-FXYD2A0A087WZ82 144 aa8.15□□□□□ -1.1
SAMM50-205ENST00000493621 LINC00587B1AMM8 73 aa8.15□□□□□ -1.1
SAMM50-205ENST00000493621 CIDEAO60543 219 aa8.15□□□□□ -1.1
SAMM50-205ENST00000493621 LINC01620Q4KN68 170 aa8.15□□□□□ -1.1
SAMM50-205ENST00000493621 LBHQ53QV2 105 aaPredicted RBP8.15□□□□□ -1.1
SAMM50-205ENST00000493621 SMCO4Q9NRQ5 59 aa8.15□□□□□ -1.1
SAMM50-205ENST00000493621 RNF222A6NCQ9 220 aa8.14□□□□□ -1.11
SAMM50-205ENST00000493621 GNG5P63218 68 aa8.14□□□□□ -1.11
SAMM50-205ENST00000493621 EIF5AP63241 154 aaKnown RBP8.14□□□□□ -1.11
SAMM50-205ENST00000493621 PEA15Q15121 130 aa8.14□□□□□ -1.11
SAMM50-205ENST00000493621 SCXQ7RTU7 201 aa8.14□□□□□ -1.11
SAMM50-205ENST00000493621 STOML3Q8TAV4 291 aa8.14□□□□□ -1.11
SAMM50-205ENST00000493621 SGK494Q96LW2 274 aa8.14□□□□□ -1.11
SAMM50-205ENST00000493621 TRAV8-3A0A0A6YYJ7 113 aa8.13□□□□□ -1.11
SAMM50-205ENST00000493621 PGPEP1LA6NFU8 196 aa8.13□□□□□ -1.11
SAMM50-205ENST00000493621 C5orf52A6NGY3 159 aa8.13□□□□□ -1.11
SAMM50-205ENST00000493621 SERTAD4-AS1Q5TG53 156 aa8.13□□□□□ -1.11
SAMM50-205ENST00000493621 DAZ4Q86SG3 579 aaKnown RBP8.13□□□□□ -1.11
SAMM50-205ENST00000493621 SYT8Q8NBV8 401 aa8.13□□□□□ -1.11
SAMM50-205ENST00000493621 SCGB1C1Q8TD33 95 aa8.13□□□□□ -1.11
SAMM50-205ENST00000493621 BAALCQ8WXS3 180 aa8.13□□□□□ -1.11
SAMM50-205ENST00000493621 SMIM3Q9BZL3 60 aa8.13□□□□□ -1.11
SAMM50-205ENST00000493621 DAZ3Q9NR90 486 aaKnown RBP8.13□□□□□ -1.11
SAMM50-205ENST00000493621 C11orf21Q9P2W6 132 aa8.13□□□□□ -1.11
SAMM50-205ENST00000493621 LRP1Q07954 4544 aaKnown RBP8.13□□□□□ -1.11
SAMM50-205ENST00000493621 GAGE12JA6NER3 117 aa8.12□□□□□ -1.11
SAMM50-205ENST00000493621 MGST1P10620 155 aaKnown RBP8.12□□□□□ -1.11
SAMM50-205ENST00000493621 TPT1P13693 172 aaKnown RBP8.12□□□□□ -1.11
SAMM50-205ENST00000493621 RAB5CP51148 216 aa8.12□□□□□ -1.11
SAMM50-205ENST00000493621 ZNF80P51504 273 aaPredicted RBP8.12□□□□□ -1.11
SAMM50-205ENST00000493621 BLOC1S1P78537 153 aa8.12□□□□□ -1.11
SAMM50-205ENST00000493621 GAGE1Q13065 139 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms