RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 IGHV3-30-5P0DP03 117 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 Q8IYB0 196 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 PRR25Q96S07 402 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 DYNLRB1Q9NP97 96 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 NAV3Q8IVL0 2385 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 TRAV12-2A0A075B6T6 113 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 TRAV26-2A0A0B4J265 109 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 A0A0G2JNJ9 132 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 TMEM89A2RUT3 159 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 SH2D1AO60880 128 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 RBM3P98179 157 aaKnown RBP5.28□□□□□ -1.56
VPS13B-205ENST00000493587 PAX8Q06710 450 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 C20orf197Q8N268 126 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 CTSZQ9UBR2 303 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 DKK4Q9UBT3 224 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 Q9UFV3 132 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 PINLYPA6NC86 204 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 TMEM178BH3BS89 294 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 PRCDQ00LT1 54 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 MUSTN1Q8IVN3 82 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 DMXL2Q8TDJ6 3036 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 TPRP12270 2363 aaKnown RBP5.28□□□□□ -1.56
VPS13B-205ENST00000493587 VPS13CQ709C8 3753 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 APELAP0DMC3 54 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 FAM223AQ8IWN6 122 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 DEFB104AQ8WTQ1 72 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 U3KQE9 123 aa5.28□□□□□ -1.56
VPS13B-205ENST00000493587 LIFP15018 202 aa5.27□□□□□ -1.57
VPS13B-205ENST00000493587 RNF182Q8N6D2 247 aa5.27□□□□□ -1.57
VPS13B-205ENST00000493587 LINC00482Q8N8I6 264 aa5.27□□□□□ -1.57
VPS13B-205ENST00000493587 TMEM14BQ9NUH8 114 aa5.27□□□□□ -1.57
VPS13B-205ENST00000493587 A0A087WVE0 104 aa5.27□□□□□ -1.57
VPS13B-205ENST00000493587 CXCL5P42830 114 aa5.27□□□□□ -1.57
VPS13B-205ENST00000493587 ZNF826PQ6ZT77 177 aa5.27□□□□□ -1.57
VPS13B-205ENST00000493587 PRIMA1Q86XR5 153 aa5.27□□□□□ -1.57
VPS13B-205ENST00000493587 NEXN-AS1Q8NBZ9 246 aa5.27□□□□□ -1.57
VPS13B-205ENST00000493587 SMCR5Q8TEV8 140 aa5.27□□□□□ -1.57
VPS13B-205ENST00000493587 ICOSQ9Y6W8 199 aa5.27□□□□□ -1.57
VPS13B-205ENST00000493587 CEP250Q9BV73 2442 aa5.27□□□□□ -1.57
VPS13B-205ENST00000493587 DNAL4O96015 105 aa5.27□□□□□ -1.57
VPS13B-205ENST00000493587 RFPL3SP0C7P2 107 aa5.27□□□□□ -1.57
VPS13B-205ENST00000493587 EIF4EBP1Q13541 118 aaPredicted RBP5.27□□□□□ -1.57
VPS13B-205ENST00000493587 PMAIP1Q13794 54 aa5.27□□□□□ -1.57
VPS13B-205ENST00000493587 RBMY1BA6NDE4 496 aaKnown RBP5.26□□□□□ -1.57
VPS13B-205ENST00000493587 RBMY1EA6NEQ0 496 aaKnown RBP5.26□□□□□ -1.57
VPS13B-205ENST00000493587 USP17L23D6RBM5 183 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 CXCL13O43927 109 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 RBMY1DP0C7P1 496 aaKnown RBP5.26□□□□□ -1.57
VPS13B-205ENST00000493587 RBMY1A1P0DJD3 496 aaKnown RBP5.26□□□□□ -1.57
VPS13B-205ENST00000493587 RBMY1CP0DJD4 496 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 LOXP28300 417 aaPredicted RBP5.26□□□□□ -1.57
VPS13B-205ENST00000493587 UBE2E1P51965 193 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 RBMY1FQ15415 496 aaKnown RBP5.26□□□□□ -1.57
VPS13B-205ENST00000493587 ORMDL2Q53FV1 153 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 HCP5Q6MZN7 132 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 C14orf178Q8N769 122 aaPredicted RBP5.26□□□□□ -1.57
VPS13B-205ENST00000493587 SLC25A29Q8N8R3 303 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 ICE1Q9Y2F5 2266 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 WNK2Q9Y3S1 2297 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 IGKV3D-15A0A087WSY6 115 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 SMIM26A0A096LP01 95 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 TRBV7-1A0A0A6YYK4 115 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 C17orf100A8MU93 164 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 WISP2O76076 250 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 TIRAPP58753 221 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 TMEM75Q8N9X5 138 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 MPLKIPQ8TAP9 179 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 TMEM263Q8WUH6 116 aaKnown RBP5.26□□□□□ -1.57
VPS13B-205ENST00000493587 SRXN1Q9BYN0 137 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 DEFB126Q9BYW3 111 aa5.26□□□□□ -1.57
VPS13B-205ENST00000493587 DNAJC13O75165 2243 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 TRAV12-1A0A0B4J245 112 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 CRIP1P50238 77 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 ZCCHC24Q8N2G6 241 aaKnown RBP5.25□□□□□ -1.57
VPS13B-205ENST00000493587 SERP1Q9Y6X1 66 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 MGAQ8IWI9 3026 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 CACNA1HO95180 2353 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 TRBV19A0A075B6N1 114 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 MRPL33O75394 65 aaKnown RBP5.25□□□□□ -1.57
VPS13B-205ENST00000493587 FOLR3P41439 243 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 SPANXN1Q5VSR9 72 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 DAZ4Q86SG3 579 aaKnown RBP5.25□□□□□ -1.57
VPS13B-205ENST00000493587 PRSS33Q8NF86 280 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 SLC50A1Q9BRV3 221 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 DAZ1Q9NQZ3 744 aaKnown RBP5.25□□□□□ -1.57
VPS13B-205ENST00000493587 PROP1O75360 226 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 FHL2Q14192 279 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 C2orf66Q6UXQ4 117 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 Q8TAT8 98 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 TP53TG1Q9Y2A0 90 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 ARHGAP32A7KAX9 2087 aa5.25□□□□□ -1.57
VPS13B-205ENST00000493587 DSPP15924 2871 aaKnown RBP5.25□□□□□ -1.57
VPS13B-205ENST00000493587 TRBV30A0A0K0K1B3 111 aa5.24□□□□□ -1.57
VPS13B-205ENST00000493587 C11orf86A6NJI1 115 aa5.24□□□□□ -1.57
VPS13B-205ENST00000493587 K7ENP7 123 aa5.24□□□□□ -1.57
VPS13B-205ENST00000493587 C10orf55Q5SWW7 151 aa5.24□□□□□ -1.57
VPS13B-205ENST00000493587 FAM90A1Q86YD7 464 aa5.24□□□□□ -1.57
VPS13B-205ENST00000493587 RAI1Q7Z5J4 1906 aaPredicted RBP5.24□□□□□ -1.57
VPS13B-205ENST00000493587 TIMM17BO60830 172 aa5.24□□□□□ -1.57
VPS13B-205ENST00000493587 EGR2P11161 476 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms