RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 NDUFS6O75380 124 aaKnown RBP5.76□□□□□ -1.49
TM4SF1-204ENST00000493348 P0DMU3 169 aa5.76□□□□□ -1.49
TM4SF1-204ENST00000493348 FAM231AP0DMU4 169 aa5.76□□□□□ -1.49
TM4SF1-204ENST00000493348 FAM231CP0DMU5 169 aa5.76□□□□□ -1.49
TM4SF1-204ENST00000493348 RASL10AQ92737 203 aa5.76□□□□□ -1.49
TM4SF1-204ENST00000493348 SMIM7Q9BQ49 75 aa5.76□□□□□ -1.49
TM4SF1-204ENST00000493348 PARLQ9H300 379 aa5.76□□□□□ -1.49
TM4SF1-204ENST00000493348 SMDT1Q9H4I9 107 aa5.76□□□□□ -1.49
TM4SF1-204ENST00000493348 STARD9Q9P2P6 4700 aa5.76□□□□□ -1.49
TM4SF1-204ENST00000493348 TRAV26-1A0A087WT03 109 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 IGKV3D-20A0A0C4DH25 116 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 A0A0J9YY99 117 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 ZNF727A8MUV8 499 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 A8MWV9 139 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 PAX4O43316 350 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 ARMS2P0C7Q2 107 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 FAM74A3Q4VXF1 159 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 SPANXN1Q5VSR9 72 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 ZFP82Q8N141 532 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 LINC00612Q8N6U2 182 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 OR2D3Q8NGH3 330 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 C18orf15Q96N68 181 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 MLST8Q9BVC4 326 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 TPPP3Q9BW30 176 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 IL36BQ9NZH7 164 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 C11orf21Q9P2W6 132 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 PRO0255Q9UI72 69 aa5.75□□□□□ -1.49
TM4SF1-204ENST00000493348 DYNC2H1Q8NCM8 4307 aaKnown RBP5.74□□□□□ -1.49
TM4SF1-204ENST00000493348 M0R381 172 aa5.74□□□□□ -1.49
TM4SF1-204ENST00000493348 CXCL1P09341 107 aa5.74□□□□□ -1.49
TM4SF1-204ENST00000493348 SMIM17P0DL12 118 aa5.74□□□□□ -1.49
TM4SF1-204ENST00000493348 CRIP1P50238 77 aa5.74□□□□□ -1.49
TM4SF1-204ENST00000493348 CCL18P55774 89 aa5.74□□□□□ -1.49
TM4SF1-204ENST00000493348 ERVFC1-1P60608 527 aa5.74□□□□□ -1.49
TM4SF1-204ENST00000493348 LGALS9CQ6DKI2 356 aa5.74□□□□□ -1.49
TM4SF1-204ENST00000493348 C9orf85Q96MD7 179 aa5.74□□□□□ -1.49
TM4SF1-204ENST00000493348 APLNQ9ULZ1 77 aa5.74□□□□□ -1.49
TM4SF1-204ENST00000493348 HHLA3Q9XRX5 114 aa5.74□□□□□ -1.49
TM4SF1-204ENST00000493348 ICOSQ9Y6W8 199 aa5.74□□□□□ -1.49
TM4SF1-204ENST00000493348 PLECQ15149 4684 aaKnown RBP5.74□□□□□ -1.49
TM4SF1-204ENST00000493348 LCE6AA0A183 80 aa5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 PGPEP1LA6NFU8 196 aa5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 RHODO00212 210 aa5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 GATCO43716 136 aaKnown RBP5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 SRP19P09132 144 aaKnown RBP5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 SFTA3P0C7M3 94 aa5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 MED14OSP0DP75 135 aa5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 RNASE3P12724 160 aaKnown RBP5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 RPL19P84098 196 aaKnown RBP5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 TMEM241Q24JQ0 296 aa5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 SOHLH1Q5JUK2 328 aa5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 PIK3CD-AS1Q5SR53 167 aa5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 DNLZQ5SXM8 178 aa5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 C15orf54Q8N8G6 183 aa5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 OCC1Q8TAD7 63 aa5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 LINC00476Q8WZB0 136 aa5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 PTH2Q96A98 100 aa5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 BORCS7Q96B45 105 aa5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 PRADC1Q9BSG0 188 aa5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 LY96Q9Y6Y9 160 aa5.73□□□□□ -1.49
TM4SF1-204ENST00000493348 A0A1W2PPQ1 181 aa5.72□□□□□ -1.49
TM4SF1-204ENST00000493348 H3BNG1 76 aa5.72□□□□□ -1.49
TM4SF1-204ENST00000493348 HOXA5P20719 270 aa5.72□□□□□ -1.49
TM4SF1-204ENST00000493348 SRIP30626 198 aa5.72□□□□□ -1.49
TM4SF1-204ENST00000493348 SSTP61278 116 aa5.72□□□□□ -1.49
TM4SF1-204ENST00000493348 CACNG7P62955 275 aa5.72□□□□□ -1.49
TM4SF1-204ENST00000493348 ADIRFQ15847 76 aa5.72□□□□□ -1.49
TM4SF1-204ENST00000493348 MRPL23Q16540 153 aaKnown RBP5.72□□□□□ -1.49
TM4SF1-204ENST00000493348 FAM74A4Q5TZK3 123 aa5.72□□□□□ -1.49
TM4SF1-204ENST00000493348 SMIM15Q7Z3B0 74 aa5.72□□□□□ -1.49
TM4SF1-204ENST00000493348 FER1L6-AS1Q8NA97 138 aa5.72□□□□□ -1.49
TM4SF1-204ENST00000493348 ZNF479Q96JC4 524 aa5.72□□□□□ -1.49
TM4SF1-204ENST00000493348 RPP21Q9H633 154 aaKnown RBP5.72□□□□□ -1.49
TM4SF1-204ENST00000493348 NAT8Q9UHE5 227 aa5.72□□□□□ -1.49
TM4SF1-204ENST00000493348 LYSTQ99698 3801 aa5.72□□□□□ -1.49
TM4SF1-204ENST00000493348 TRBV20OR9-2A0A075B6H5 130 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 IGHV3-73A0A0B4J1V6 119 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 A8MWL6 223 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 F2Z2F3 143 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 RS1O15537 224 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 IGLV2-8P01709 118 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 OR5AL1P0C617 328 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 RHOHQ15669 191 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 RNF212Q495C1 297 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 CLLU1Q5K131 121 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 CFAP126Q5VTH2 177 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 ZFP2Q6ZN57 461 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 SH2D6Q7Z4S9 175 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 NUDT10Q8NFP7 164 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 NUDT11Q96G61 164 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 AP1S3Q96PC3 154 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 RNASE7Q9H1E1 156 aaKnown RBP5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 ALMS1Q8TCU4 4167 aa5.71□□□□□ -1.5
TM4SF1-204ENST00000493348 C19orf71A6NCJ1 209 aa5.7□□□□□ -1.5
TM4SF1-204ENST00000493348 F5H697 171 aa5.7□□□□□ -1.5
TM4SF1-204ENST00000493348 TRGC1P0CF51 173 aa5.7□□□□□ -1.5
TM4SF1-204ENST00000493348 GYPEP15421 78 aa5.7□□□□□ -1.5
TM4SF1-204ENST00000493348 CRYBA4P53673 196 aa5.7□□□□□ -1.5
TM4SF1-204ENST00000493348 FHL2Q14192 279 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms