RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 CMTM2Q8TAZ6 248 aa8.93□□□□□ -0.98
GPNMB-213ENST00000492512 DAZAP1Q96EP5 407 aaKnown RBP8.93□□□□□ -0.98
GPNMB-213ENST00000492512 NMES1Q9C002 83 aa8.93□□□□□ -0.98
GPNMB-213ENST00000492512 TREM1Q9NP99 234 aa8.93□□□□□ -0.98
GPNMB-213ENST00000492512 URGCP-MRPS24S4R325 110 aa8.93□□□□□ -0.98
GPNMB-213ENST00000492512 A0A087WWC5 75 aa8.92□□□□□ -0.98
GPNMB-213ENST00000492512 GAGE12JA6NER3 117 aa8.92□□□□□ -0.98
GPNMB-213ENST00000492512 SEC11BP0C7V7 166 aa8.92□□□□□ -0.98
GPNMB-213ENST00000492512 NHLH2Q02577 135 aa8.92□□□□□ -0.98
GPNMB-213ENST00000492512 GAGE1Q13065 139 aa8.92□□□□□ -0.98
GPNMB-213ENST00000492512 GAGE4Q13068 117 aa8.92□□□□□ -0.98
GPNMB-213ENST00000492512 GAGE5Q13069 117 aa8.92□□□□□ -0.98
GPNMB-213ENST00000492512 NDUFA5Q16718 116 aa8.92□□□□□ -0.98
GPNMB-213ENST00000492512 GAGE13Q4V321 117 aa8.92□□□□□ -0.98
GPNMB-213ENST00000492512 GOLT1AQ6ZVE7 132 aa8.92□□□□□ -0.98
GPNMB-213ENST00000492512 OR2T35Q8NGX2 323 aa8.92□□□□□ -0.98
GPNMB-213ENST00000492512 PGPA6NDG6 321 aa8.91□□□□□ -0.98
GPNMB-213ENST00000492512 LRP2P98164 4655 aa8.91□□□□□ -0.98
GPNMB-213ENST00000492512 ZNF506Q5JVG8 444 aa8.91□□□□□ -0.98
GPNMB-213ENST00000492512 FAM74A1Q5RGS3 127 aa8.91□□□□□ -0.98
GPNMB-213ENST00000492512 C9orf62Q8N4C0 152 aa8.91□□□□□ -0.98
GPNMB-213ENST00000492512 TVP23CQ96ET8 276 aa8.91□□□□□ -0.98
GPNMB-213ENST00000492512 DNAJC30Q96LL9 226 aa8.91□□□□□ -0.98
GPNMB-213ENST00000492512 OTORQ9NRC9 128 aa8.91□□□□□ -0.98
GPNMB-213ENST00000492512 HSPB11Q9Y547 144 aa8.91□□□□□ -0.98
GPNMB-213ENST00000492512 PGPEP1LA6NFU8 196 aa8.9□□□□□ -0.98
GPNMB-213ENST00000492512 C17orf112F2Z3M2 114 aa8.9□□□□□ -0.98
GPNMB-213ENST00000492512 SMLR1H3BR10 107 aa8.9□□□□□ -0.98
GPNMB-213ENST00000492512 MT1HL1P0DM35 61 aa8.9□□□□□ -0.98
GPNMB-213ENST00000492512 TAS2R45P59539 299 aa8.9□□□□□ -0.98
GPNMB-213ENST00000492512 IFITM2Q01629 132 aa8.9□□□□□ -0.98
GPNMB-213ENST00000492512 IL15RAQ13261 267 aa8.9□□□□□ -0.98
GPNMB-213ENST00000492512 KHDC3LQ587J8 217 aa8.9□□□□□ -0.98
GPNMB-213ENST00000492512 CYB561D1Q8N8Q1 229 aa8.9□□□□□ -0.98
GPNMB-213ENST00000492512 UBE2WQ96B02 151 aa8.9□□□□□ -0.98
GPNMB-213ENST00000492512 WDR61Q9GZS3 305 aaKnown RBP8.9□□□□□ -0.98
GPNMB-213ENST00000492512 KLK12Q9UKR0 248 aa8.9□□□□□ -0.98
GPNMB-213ENST00000492512 RNF213Q63HN8 5207 aa8.89□□□□□ -0.99
GPNMB-213ENST00000492512 HMSDA8MTL9 139 aa8.89□□□□□ -0.99
GPNMB-213ENST00000492512 LINC00694P0DN24 101 aa8.89□□□□□ -0.99
GPNMB-213ENST00000492512 C14orf177Q52M58 125 aa8.89□□□□□ -0.99
GPNMB-213ENST00000492512 PTH2Q96A98 100 aa8.89□□□□□ -0.99
GPNMB-213ENST00000492512 C9orf85Q96MD7 179 aa8.89□□□□□ -0.99
GPNMB-213ENST00000492512 CYCSP99999 105 aaKnown RBP8.88□□□□□ -0.99
GPNMB-213ENST00000492512 ZFP2Q6ZN57 461 aa8.88□□□□□ -0.99
GPNMB-213ENST00000492512 NIT1Q86X76 327 aa8.88□□□□□ -0.99
GPNMB-213ENST00000492512 ARL6IP6Q8N6S5 226 aa8.88□□□□□ -0.99
GPNMB-213ENST00000492512 NDFIP1Q9BT67 221 aa8.88□□□□□ -0.99
GPNMB-213ENST00000492512 PARLQ9H300 379 aa8.88□□□□□ -0.99
GPNMB-213ENST00000492512 C11orf21Q9P2W6 132 aa8.88□□□□□ -0.99
GPNMB-213ENST00000492512 MBD2Q9UBB5 411 aa8.88□□□□□ -0.99
GPNMB-213ENST00000492512 A0A087WX48 190 aa8.87□□□□□ -0.99
GPNMB-213ENST00000492512 G3V3Q6 166 aa8.87□□□□□ -0.99
GPNMB-213ENST00000492512 TAAR5O14804 337 aa8.87□□□□□ -0.99
GPNMB-213ENST00000492512 FGF8P55075 233 aaPredicted RBP8.87□□□□□ -0.99
GPNMB-213ENST00000492512 H2BFSP57053 126 aa8.87□□□□□ -0.99
GPNMB-213ENST00000492512 ELOBQ15370 118 aa8.87□□□□□ -0.99
GPNMB-213ENST00000492512 FFAR4Q5NUL3 377 aa8.87□□□□□ -0.99
GPNMB-213ENST00000492512 OR11H4Q8NGC9 324 aa8.87□□□□□ -0.99
GPNMB-213ENST00000492512 Q9UF83 564 aa8.87□□□□□ -0.99
GPNMB-213ENST00000492512 A8MWV9 139 aa8.86□□□□□ -0.99
GPNMB-213ENST00000492512 ATP6V1G1O75348 118 aa8.86□□□□□ -0.99
GPNMB-213ENST00000492512 EIF3GO75821 320 aaKnown RBP eCLIP8.86□□□□□ -0.99
GPNMB-213ENST00000492512 SIX6O95475 246 aa8.86□□□□□ -0.99
GPNMB-213ENST00000492512 GCGP01275 180 aa8.86□□□□□ -0.99
GPNMB-213ENST00000492512 RNASE3P12724 160 aaKnown RBP8.86□□□□□ -0.99
GPNMB-213ENST00000492512 ZNF80P51504 273 aaPredicted RBP8.86□□□□□ -0.99
GPNMB-213ENST00000492512 GNG5P63218 68 aa8.86□□□□□ -0.99
GPNMB-213ENST00000492512 Q5BKY6 102 aa8.86□□□□□ -0.99
GPNMB-213ENST00000492512 KCNIP4Q6PIL6 250 aa8.86□□□□□ -0.99
GPNMB-213ENST00000492512 Q6ZRU5 148 aa8.86□□□□□ -0.99
GPNMB-213ENST00000492512 TMEM75Q8N9X5 138 aa8.86□□□□□ -0.99
GPNMB-213ENST00000492512 OR10G9Q8NGN4 311 aa8.86□□□□□ -0.99
GPNMB-213ENST00000492512 SGK494Q96LW2 274 aa8.86□□□□□ -0.99
GPNMB-213ENST00000492512 SAMD10Q9BYL1 202 aa8.86□□□□□ -0.99
GPNMB-213ENST00000492512 Q0VG73 95 aa8.85□□□□□ -0.99
GPNMB-213ENST00000492512 LGALSLQ3ZCW2 172 aaPredicted RBP8.85□□□□□ -0.99
GPNMB-213ENST00000492512 ATRAIDQ6UW56 229 aa8.85□□□□□ -0.99
GPNMB-213ENST00000492512 C14orf178Q8N769 122 aaPredicted RBP8.85□□□□□ -0.99
GPNMB-213ENST00000492512 C1orf43Q9BWL3 253 aa8.85□□□□□ -0.99
GPNMB-213ENST00000492512 DMRTA1Q5VZB9 504 aa8.84□□□□□ -0.99
GPNMB-213ENST00000492512 LINC00479Q96M42 142 aa8.84□□□□□ -0.99
GPNMB-213ENST00000492512 CHCHD7Q9BUK0 85 aa8.84□□□□□ -0.99
GPNMB-213ENST00000492512 FXYD6-FXYD2A0A087WZ82 144 aa8.83□□□□□ -1
GPNMB-213ENST00000492512 IFNA7P01567 189 aa8.83□□□□□ -1
GPNMB-213ENST00000492512 S100A4P26447 101 aaKnown RBP8.83□□□□□ -1
GPNMB-213ENST00000492512 PIK3CD-AS1Q5SR53 167 aa8.83□□□□□ -1
GPNMB-213ENST00000492512 PQLC2Q6ZP29 291 aa8.83□□□□□ -1
GPNMB-213ENST00000492512 OR5AC2Q9NZP5 309 aa8.83□□□□□ -1
GPNMB-213ENST00000492512 A0A0D9SG52 128 aa8.82□□□□□ -1
GPNMB-213ENST00000492512 SERTM2A0A1B0GWG4 89 aa8.82□□□□□ -1
GPNMB-213ENST00000492512 LRRC37A5PQ49AS3 106 aa8.82□□□□□ -1
GPNMB-213ENST00000492512 SMUG1Q53HV7 270 aa8.82□□□□□ -1
GPNMB-213ENST00000492512 SCGB1C1Q8TD33 95 aa8.82□□□□□ -1
GPNMB-213ENST00000492512 FAM210AQ96ND0 272 aa8.82□□□□□ -1
GPNMB-213ENST00000492512 JPT2Q9H910 190 aa8.82□□□□□ -1
GPNMB-213ENST00000492512 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.82□□□□□ -1
GPNMB-213ENST00000492512 TNXBP22105 4242 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 A0A1W2PPV4 95 aa8.81□□□□□ -1
GPNMB-213ENST00000492512 USP17L23D6RBM5 183 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms