RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 PKD1P98161 4303 aa10.57□□□□□ -0.72
CDC42SE1-205ENST00000491825 TRGV1A0A0A0MS02 117 aa10.57□□□□□ -0.72
CDC42SE1-205ENST00000491825 C9JQL5 133 aa10.57□□□□□ -0.72
CDC42SE1-205ENST00000491825 M0R036 132 aa10.57□□□□□ -0.72
CDC42SE1-205ENST00000491825 M0R2P5 195 aa10.57□□□□□ -0.72
CDC42SE1-205ENST00000491825 MGST1P10620 155 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-205ENST00000491825 RNASE3P12724 160 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-205ENST00000491825 ASIPP42127 132 aa10.57□□□□□ -0.72
CDC42SE1-205ENST00000491825 CEBPGP53567 150 aa10.57□□□□□ -0.72
CDC42SE1-205ENST00000491825 FAM74A3Q4VXF1 159 aa10.57□□□□□ -0.72
CDC42SE1-205ENST00000491825 ZNF575Q86XF7 245 aa10.57□□□□□ -0.72
CDC42SE1-205ENST00000491825 PTH2Q96A98 100 aa10.57□□□□□ -0.72
CDC42SE1-205ENST00000491825 ZNF727A8MUV8 499 aa10.56□□□□□ -0.72
CDC42SE1-205ENST00000491825 K7EN84 100 aa10.56□□□□□ -0.72
CDC42SE1-205ENST00000491825 ATP5G1P05496 136 aa10.56□□□□□ -0.72
CDC42SE1-205ENST00000491825 LINC00336Q6ZUF6 198 aa10.56□□□□□ -0.72
CDC42SE1-205ENST00000491825 POM121L12Q8N7R1 296 aa10.56□□□□□ -0.72
CDC42SE1-205ENST00000491825 OCC1Q8TAD7 63 aa10.56□□□□□ -0.72
CDC42SE1-205ENST00000491825 MRPL16Q9NX20 251 aaKnown RBP10.56□□□□□ -0.72
CDC42SE1-205ENST00000491825 GAGE12BA1L429 117 aa10.55□□□□□ -0.72
CDC42SE1-205ENST00000491825 GAGE7O76087 117 aa10.55□□□□□ -0.72
CDC42SE1-205ENST00000491825 GAGE12FP0CL80 117 aa10.55□□□□□ -0.72
CDC42SE1-205ENST00000491825 GAGE12GP0CL81 117 aa10.55□□□□□ -0.72
CDC42SE1-205ENST00000491825 GAGE12IP0CL82 117 aa10.55□□□□□ -0.72
CDC42SE1-205ENST00000491825 P0DMU3 169 aa10.55□□□□□ -0.72
CDC42SE1-205ENST00000491825 FAM231AP0DMU4 169 aa10.55□□□□□ -0.72
CDC42SE1-205ENST00000491825 FAM231CP0DMU5 169 aa10.55□□□□□ -0.72
CDC42SE1-205ENST00000491825 MED14OSP0DP75 135 aa10.55□□□□□ -0.72
CDC42SE1-205ENST00000491825 S100A4P26447 101 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-205ENST00000491825 OR5I1Q13606 314 aa10.55□□□□□ -0.72
CDC42SE1-205ENST00000491825 PIK3CD-AS1Q5SR53 167 aa10.55□□□□□ -0.72
CDC42SE1-205ENST00000491825 FAM210BQ96KR6 192 aa10.55□□□□□ -0.72
CDC42SE1-205ENST00000491825 SCRT2Q9NQ03 307 aa10.55□□□□□ -0.72
CDC42SE1-205ENST00000491825 TRGV2A0A075B6R0 118 aa10.54□□□□□ -0.72
CDC42SE1-205ENST00000491825 P01737 135 aa10.54□□□□□ -0.72
CDC42SE1-205ENST00000491825 RPL19P84098 196 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-205ENST00000491825 LINC01551Q86U37 167 aa10.54□□□□□ -0.72
CDC42SE1-205ENST00000491825 DAZAP1Q96EP5 407 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-205ENST00000491825 TMSB15BA0A087X1C1 80 aa10.53□□□□□ -0.72
CDC42SE1-205ENST00000491825 H3BVH4 76 aa10.53□□□□□ -0.72
CDC42SE1-205ENST00000491825 RTL8CO15255 209 aa10.53□□□□□ -0.72
CDC42SE1-205ENST00000491825 RPS20P60866 119 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-205ENST00000491825 ZNF876PQ49A33 203 aa10.53□□□□□ -0.72
CDC42SE1-205ENST00000491825 FAM231DQ6ZW35 169 aa10.53□□□□□ -0.72
CDC42SE1-205ENST00000491825 MUC4Q99102 2169 aa10.53□□□□□ -0.72
CDC42SE1-205ENST00000491825 GRIFINA4D1Z8 144 aa10.52□□□□□ -0.73
CDC42SE1-205ENST00000491825 ARMS2P0C7Q2 107 aa10.52□□□□□ -0.73
CDC42SE1-205ENST00000491825 SOHLH1Q5JUK2 328 aa10.52□□□□□ -0.73
CDC42SE1-205ENST00000491825 UQCC3Q6UW78 93 aa10.52□□□□□ -0.73
CDC42SE1-205ENST00000491825 NAT8Q9UHE5 227 aa10.52□□□□□ -0.73
CDC42SE1-205ENST00000491825 TRAV4A0A0B4J268 109 aa10.51□□□□□ -0.73
CDC42SE1-205ENST00000491825 XKRY2A2RUG3 117 aa10.51□□□□□ -0.73
CDC42SE1-205ENST00000491825 SNAI2O43623 268 aa10.51□□□□□ -0.73
CDC42SE1-205ENST00000491825 OR5AL1P0C617 328 aa10.51□□□□□ -0.73
CDC42SE1-205ENST00000491825 TMEM241Q24JQ0 296 aa10.51□□□□□ -0.73
CDC42SE1-205ENST00000491825 NUDT10Q8NFP7 164 aa10.51□□□□□ -0.73
CDC42SE1-205ENST00000491825 OR2D3Q8NGH3 330 aa10.51□□□□□ -0.73
CDC42SE1-205ENST00000491825 NUDT11Q96G61 164 aa10.51□□□□□ -0.73
CDC42SE1-205ENST00000491825 SSBP4Q9BWG4 385 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-205ENST00000491825 RNASE7Q9H1E1 156 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-205ENST00000491825 RPP21Q9H633 154 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-205ENST00000491825 CIDEAO60543 219 aa10.5□□□□□ -0.73
CDC42SE1-205ENST00000491825 NXPH4O95158 308 aa10.5□□□□□ -0.73
CDC42SE1-205ENST00000491825 SFTA3P0C7M3 94 aa10.5□□□□□ -0.73
CDC42SE1-205ENST00000491825 HTN3P15516 51 aa10.5□□□□□ -0.73
CDC42SE1-205ENST00000491825 HOXA5P20719 270 aa10.5□□□□□ -0.73
CDC42SE1-205ENST00000491825 CT83Q5H943 113 aa10.5□□□□□ -0.73
CDC42SE1-205ENST00000491825 Q6ZR54 194 aa10.5□□□□□ -0.73
CDC42SE1-205ENST00000491825 PHLDA3Q9Y5J5 127 aa10.5□□□□□ -0.73
CDC42SE1-205ENST00000491825 RYR1P21817 5038 aa10.49□□□□□ -0.73
CDC42SE1-205ENST00000491825 LINC00862A6NCI5 91 aa10.49□□□□□ -0.73
CDC42SE1-205ENST00000491825 F5H768 121 aa10.49□□□□□ -0.73
CDC42SE1-205ENST00000491825 M0R2N4 97 aa10.49□□□□□ -0.73
CDC42SE1-205ENST00000491825 IGLC6P0CF74 106 aa10.49□□□□□ -0.73
CDC42SE1-205ENST00000491825 RPL23P62829 140 aaKnown RBP10.49□□□□□ -0.73
CDC42SE1-205ENST00000491825 ZFP82Q8N141 532 aa10.49□□□□□ -0.73
CDC42SE1-205ENST00000491825 SYT8Q8NBV8 401 aa10.49□□□□□ -0.73
CDC42SE1-205ENST00000491825 ISOC2Q96AB3 205 aa10.49□□□□□ -0.73
CDC42SE1-205ENST00000491825 A0A1W2PPQ1 181 aa10.48□□□□□ -0.73
CDC42SE1-205ENST00000491825 PRSS29PA6NIE9 313 aa10.48□□□□□ -0.73
CDC42SE1-205ENST00000491825 A8MWV9 139 aa10.48□□□□□ -0.73
CDC42SE1-205ENST00000491825 H3BNG1 76 aa10.48□□□□□ -0.73
CDC42SE1-205ENST00000491825 RS1O15537 224 aa10.48□□□□□ -0.73
CDC42SE1-205ENST00000491825 ERVFC1-1P60608 527 aa10.48□□□□□ -0.73
CDC42SE1-205ENST00000491825 TMEM88Q6PEY1 159 aa10.48□□□□□ -0.73
CDC42SE1-205ENST00000491825 ZNF479Q96JC4 524 aa10.48□□□□□ -0.73
CDC42SE1-205ENST00000491825 OSTCQ9NRP0 149 aa10.48□□□□□ -0.73
CDC42SE1-205ENST00000491825 NACAE9PAV3 2078 aa10.48□□□□□ -0.73
CDC42SE1-205ENST00000491825 SLAQ13239 276 aa10.47□□□□□ -0.73
CDC42SE1-205ENST00000491825 CFAP126Q5VTH2 177 aa10.47□□□□□ -0.73
CDC42SE1-205ENST00000491825 DMRTA1Q5VZB9 504 aa10.47□□□□□ -0.73
CDC42SE1-205ENST00000491825 FER1L6-AS1Q8NA97 138 aa10.47□□□□□ -0.73
CDC42SE1-205ENST00000491825 C15orf53Q8NAA6 179 aa10.47□□□□□ -0.73
CDC42SE1-205ENST00000491825 OR4C5Q8NGB2 326 aa10.47□□□□□ -0.73
CDC42SE1-205ENST00000491825 OR10AG1Q8NH19 301 aa10.47□□□□□ -0.73
CDC42SE1-205ENST00000491825 F2Z2F3 143 aa10.46□□□□□ -0.73
CDC42SE1-205ENST00000491825 GATCO43716 136 aaKnown RBP10.46□□□□□ -0.73
CDC42SE1-205ENST00000491825 IGHV3-53P01767 116 aa10.46□□□□□ -0.73
CDC42SE1-205ENST00000491825 GZMBP10144 247 aa10.46□□□□□ -0.73
CDC42SE1-205ENST00000491825 CTRLP40313 264 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms