RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 SERTM2A0A1B0GWG4 89 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 FAM74A7A6NL05 159 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 F6UZH7 168 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 GNRH2O43555 120 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 PDE6DO43924 150 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 PAGE4O60829 102 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 IGLV2-11P01706 119 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 UBE2G2P60604 165 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 CCL20P78556 96 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 MEF2BQ02080 365 aaPredicted RBP6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 TMEM183BQ1AE95 376 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 TOR2AQ5JU69 321 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 ZNF506Q5JVG8 444 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 CST9LP1Q5W188 147 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 FAM159AQ6UWV7 190 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 GOLT1AQ6ZVE7 132 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 COMMD7Q86VX2 200 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 TMEM183AQ8IXX5 376 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 CMTM2Q8TAZ6 248 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 C8orf49Q96NF6 230 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 LRP1BQ9NZR2 4599 aa6.63□□□□□ -1.35
TMEM39A-210ENST00000490099 TRAV21A0A0B4J279 112 aa6.63□□□□□ -1.35
TMEM39A-210ENST00000490099 C16orf90A8MZG2 172 aa6.63□□□□□ -1.35
TMEM39A-210ENST00000490099 M0R2P5 195 aa6.63□□□□□ -1.35
TMEM39A-210ENST00000490099 SIVA1O15304 175 aa6.63□□□□□ -1.35
TMEM39A-210ENST00000490099 NXPH4O95158 308 aa6.63□□□□□ -1.35
TMEM39A-210ENST00000490099 IGHV3-53P01767 116 aa6.63□□□□□ -1.35
TMEM39A-210ENST00000490099 TCRAP04437 139 aa6.63□□□□□ -1.35
TMEM39A-210ENST00000490099 NEGR1Q7Z3B1 354 aa6.63□□□□□ -1.35
TMEM39A-210ENST00000490099 C5orf17Q8NAS9 161 aa6.63□□□□□ -1.35
TMEM39A-210ENST00000490099 ZNF479Q96JC4 524 aa6.63□□□□□ -1.35
TMEM39A-210ENST00000490099 KRTAP4-5Q9BYR2 181 aa6.63□□□□□ -1.35
TMEM39A-210ENST00000490099 TREM1Q9NP99 234 aa6.63□□□□□ -1.35
TMEM39A-210ENST00000490099 TRAV4A0A0B4J268 109 aa6.62□□□□□ -1.35
TMEM39A-210ENST00000490099 TMEM250H0YL14 139 aa6.62□□□□□ -1.35
TMEM39A-210ENST00000490099 K7EP13 123 aa6.62□□□□□ -1.35
TMEM39A-210ENST00000490099 K7EQD1 137 aa6.62□□□□□ -1.35
TMEM39A-210ENST00000490099 K7EQM0 130 aa6.62□□□□□ -1.35
TMEM39A-210ENST00000490099 SFTA3P0C7M3 94 aa6.62□□□□□ -1.35
TMEM39A-210ENST00000490099 ZNF80P51504 273 aaPredicted RBP6.62□□□□□ -1.35
TMEM39A-210ENST00000490099 TIRAPP58753 221 aa6.62□□□□□ -1.35
TMEM39A-210ENST00000490099 SUMO1P63165 101 aaKnown RBP6.62□□□□□ -1.35
TMEM39A-210ENST00000490099 GNG5P63218 68 aa6.62□□□□□ -1.35
TMEM39A-210ENST00000490099 HIST1H2BAQ96A08 127 aa6.62□□□□□ -1.35
TMEM39A-210ENST00000490099 PTH2Q96A98 100 aa6.62□□□□□ -1.35
TMEM39A-210ENST00000490099 C11orf21Q9P2W6 132 aa6.62□□□□□ -1.35
TMEM39A-210ENST00000490099 EPDR1Q9UM22 224 aa6.62□□□□□ -1.35
TMEM39A-210ENST00000490099 HSPG2P98160 4391 aa6.62□□□□□ -1.35
TMEM39A-210ENST00000490099 TRGV4A0A0C4DH28 118 aa6.61□□□□□ -1.35
TMEM39A-210ENST00000490099 FBLL1A6NHQ2 334 aaKnown RBP6.61□□□□□ -1.35
TMEM39A-210ENST00000490099 GGTLC3B5MD39 225 aa6.61□□□□□ -1.35
TMEM39A-210ENST00000490099 ORM1P02763 201 aa6.61□□□□□ -1.35
TMEM39A-210ENST00000490099 TYMSP04818 313 aa6.61□□□□□ -1.35
TMEM39A-210ENST00000490099 LINC00315P59091 139 aa6.61□□□□□ -1.35
TMEM39A-210ENST00000490099 KRTAP10-2P60368 255 aa6.61□□□□□ -1.35
TMEM39A-210ENST00000490099 SPATA12Q7Z6I5 190 aa6.61□□□□□ -1.35
TMEM39A-210ENST00000490099 KCNS1Q96KK3 526 aa6.61□□□□□ -1.35
TMEM39A-210ENST00000490099 SDF2L1Q9HCN8 221 aa6.61□□□□□ -1.35
TMEM39A-210ENST00000490099 PEX7O00628 323 aa6.6□□□□□ -1.35
TMEM39A-210ENST00000490099 CIDEAO60543 219 aa6.6□□□□□ -1.35
TMEM39A-210ENST00000490099 S100A9P06702 114 aaKnown RBP6.6□□□□□ -1.35
TMEM39A-210ENST00000490099 DNAH10OSP0CZ25 163 aa6.6□□□□□ -1.35
TMEM39A-210ENST00000490099 GATA1P15976 413 aaPredicted RBP6.6□□□□□ -1.35
TMEM39A-210ENST00000490099 CYB561D1Q8N8Q1 229 aa6.6□□□□□ -1.35
TMEM39A-210ENST00000490099 C11orf52Q96A22 123 aa6.6□□□□□ -1.35
TMEM39A-210ENST00000490099 C9orf85Q96MD7 179 aa6.6□□□□□ -1.35
TMEM39A-210ENST00000490099 PSG8Q9UQ74 426 aa6.6□□□□□ -1.35
TMEM39A-210ENST00000490099 C9JCJ5 164 aa6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 PFN1P07737 140 aaKnown RBP6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 GYPEP15421 78 aa6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 AKR1C3P42330 323 aa6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 UBE2G1P62253 170 aa6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 FLI1Q01543 452 aaPredicted RBP6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 FAM74A3Q4VXF1 159 aa6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 PIK3CD-AS1Q5SR53 167 aa6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 SAPCD1Q5SSQ6 148 aa6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 COX8CQ7Z4L0 72 aa6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 SH2D6Q7Z4S9 175 aa6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 TMEM75Q8N9X5 138 aa6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 OR4C5Q8NGB2 326 aa6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 SGK494Q96LW2 274 aa6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 NAGKQ9UJ70 344 aa6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 RPH3ALQ9UNE2 315 aa6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 TNFRSF18Q9Y5U5 241 aa6.59□□□□□ -1.35
TMEM39A-210ENST00000490099 RS1O15537 224 aa6.58□□□□□ -1.36
TMEM39A-210ENST00000490099 GCGP01275 180 aa6.58□□□□□ -1.36
TMEM39A-210ENST00000490099 SRP19P09132 144 aaKnown RBP6.58□□□□□ -1.36
TMEM39A-210ENST00000490099 RNASE3P12724 160 aaKnown RBP6.58□□□□□ -1.36
TMEM39A-210ENST00000490099 SRIP30626 198 aa6.58□□□□□ -1.36
TMEM39A-210ENST00000490099 CEBPGP53567 150 aa6.58□□□□□ -1.36
TMEM39A-210ENST00000490099 ZNF876PQ49A33 203 aa6.58□□□□□ -1.36
TMEM39A-210ENST00000490099 CFAP126Q5VTH2 177 aa6.58□□□□□ -1.36
TMEM39A-210ENST00000490099 NFE4Q86UQ8 179 aa6.58□□□□□ -1.36
TMEM39A-210ENST00000490099 FMC1Q96HJ9 113 aa6.58□□□□□ -1.36
TMEM39A-210ENST00000490099 NDFIP1Q9BT67 221 aa6.58□□□□□ -1.36
TMEM39A-210ENST00000490099 TRAV9-2A0A087WT02 112 aa6.57□□□□□ -1.36
TMEM39A-210ENST00000490099 IGKV3D-20A0A0C4DH25 116 aa6.57□□□□□ -1.36
TMEM39A-210ENST00000490099 TRBV6-4A0A1B0GX49 114 aa6.57□□□□□ -1.36
TMEM39A-210ENST00000490099 KRBOX1C9JBD0 128 aa6.57□□□□□ -1.36
TMEM39A-210ENST00000490099 SRSF3P84103 164 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms